RchiOBHm_Chr3g0461911

receptor-like protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
9816158 .. 9816513
356 bp
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UTR
Exon/CDS
Intron
PRQ42830

Sequence Viewer

Length: 240 bp
ATGATGATTAAGTTGTCCATTATGTTTGACATTGTTGGATTAGTGCAGCTTGAACAAAACTATGGCAATGAAACCATGCACCTCAATCCACCTCTAAAGTTTGTACCATGGCTGGTTCTGAACGATCAACCTATTGGAAATGACTACGAAAATTTTGCTGGCTATGTGTGCAAGGCTTACAAAGGTAACATTGCGCCCATGGCATGTCAATCTGTGCATTTGAAGCAGAAGACAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

79

Amino Acids

9.0

Weight (kDa)

6.04

Isoelectric Point (pI)

37.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 151
AfaI GTAC 1 cut(s) 105
AgsI TTSAA 2 cut(s) 53, 223
AluBI AGCT 1 cut(s) 49
AluI AGCT 1 cut(s) 49
ApeKI GCWGC 1 cut(s) 46
ApoI RAATTY 1 cut(s) 151
AspLEI GCGC 1 cut(s) 196
BbsI GAAGAC 1 cut(s) 236
BbvI GCAGC 1 cut(s) 58
BcgI CGANNNNNNTGC 2 cut(s) 137, 171
BisI GCNGC 1 cut(s) 47
BlsI GCNGC 1 cut(s) 48
BpiI GAAGAC 1 cut(s) 236
BsaJI CCNNGG 2 cut(s) 107, 198
Bse3DI GCAATG 2 cut(s) 73, 189
BseDI CCNNGG 2 cut(s) 107, 198
BseMI GCAATG 2 cut(s) 73, 189
BseXI GCAGC 1 cut(s) 58
BsgI GTGCAG 1 cut(s) 65
Bsp143I GATC 1 cut(s) 124
Bsp19I CCATGG 2 cut(s) 107, 198
BsrDI GCAATG 2 cut(s) 73, 189
BssECI CCNNGG 2 cut(s) 107, 198
BssMI GATC 1 cut(s) 124
BssT1I CCWWGG 2 cut(s) 107, 198
BstC8I GCNNGC 1 cut(s) 160
BstDSI CCRYGG 2 cut(s) 107, 198
BstHHI GCGC 1 cut(s) 196
BstKTI GATC 1 cut(s) 127
BstMBI GATC 1 cut(s) 124
BstMWI GCNNNNNNNGC 3 cut(s) 168, 200, 223
BstNSI RCATGY 1 cut(s) 207
BstV1I GCAGC 1 cut(s) 58
BstV2I GAAGAC 1 cut(s) 236
BtgI CCRYGG 2 cut(s) 107, 198
Cac8I GCNNGC 1 cut(s) 160
CfoI GCGC 1 cut(s) 196
Csp6I GTAC 1 cut(s) 104
CviAII CATG 4 cut(s) 76, 108, 199, 204
CviJI RGCY 4 cut(s) 49, 112, 162, 176
CviKI_1 RGCY 4 cut(s) 49, 112, 162, 176
CviQI GTAC 1 cut(s) 104
DpnI GATC 1 cut(s) 126
DpnII GATC 1 cut(s) 124
Eco130I CCWWGG 2 cut(s) 107, 198
EcoT14I CCWWGG 2 cut(s) 107, 198
ErhI CCWWGG 2 cut(s) 107, 198
FaeI CATG 4 cut(s) 79, 111, 202, 207
FaiI YATR 7 cut(s) 23, 63, 77, 109, 165, 200, 205
FatI CATG 4 cut(s) 75, 107, 198, 203
Fnu4HI GCNGC 1 cut(s) 47
Fsp4HI GCNGC 1 cut(s) 47
GlaI GCGC 1 cut(s) 195
GluI GCNGC 1 cut(s) 47
HhaI GCGC 1 cut(s) 196
Hin1II CATG 4 cut(s) 79, 111, 202, 207
Hin6I GCGC 1 cut(s) 194
HinP1I GCGC 1 cut(s) 194
Hpy188I TCNGA 1 cut(s) 120
HpyCH4V TGCA 4 cut(s) 46, 79, 171, 217
HpyF10VI GCNNNNNNNGC 3 cut(s) 168, 200, 223
Hsp92II CATG 4 cut(s) 79, 111, 202, 207
HspAI GCGC 1 cut(s) 194
Kzo9I GATC 1 cut(s) 124
LpnPI CCDG 2 cut(s) 98, 144
Lsp1109I GCAGC 1 cut(s) 58
MaeIII GTNAC 1 cut(s) 185
MalI GATC 1 cut(s) 126
MboI GATC 1 cut(s) 124
MluCI AATT 1 cut(s) 151
MmeI TCCRAC 1 cut(s) 16
MnlI CCTC 2 cut(s) 92, 102
MseI TTAA 1 cut(s) 9
MwoI GCNNNNNNNGC 3 cut(s) 168, 200, 223
NcoI CCATGG 2 cut(s) 107, 198
NdeII GATC 1 cut(s) 124
NlaIII CATG 4 cut(s) 79, 111, 202, 207
NspI RCATGY 1 cut(s) 207
PkrI GCNGC 1 cut(s) 48
RsaI GTAC 1 cut(s) 105
RsaNI GTAC 1 cut(s) 104
SaqAI TTAA 1 cut(s) 9
SatI GCNGC 1 cut(s) 47
Sau3AI GATC 1 cut(s) 124
SetI ASST 5 cut(s) 51, 84, 94, 133, 187
SgeI CNNG 8 cut(s) 62, 88, 120, 125, 171, 184, 211, 216
Sse9I AATT 1 cut(s) 151
StyI CCWWGG 2 cut(s) 107, 198
TasI AATT 1 cut(s) 151
Tru1I TTAA 1 cut(s) 9
Tru9I TTAA 1 cut(s) 9
TseI GCWGC 1 cut(s) 46
TspDTI ATGAA 1 cut(s) 84
XapI RAATTY 1 cut(s) 151
XceI RCATGY 1 cut(s) 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.