Rh7BG304300
ERF Family

Gamma-interferon-inducible lysosomal thiol

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0003951
Physical Location & Seq
Forward (+)
28985007 .. 28985691
685 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG304300.1

Sequence Viewer

Length: 495 bp
ATGGCCTCTGCTCTACTCTTCACTTGTCTCATTACCTGTTCAGTGTTCTTGCTTACTATTCCTTGTTATGTTGCTAATCAGAAAGTTACTCTCTCGCTTTACTATGACTCTTTGAGCACATCTTGTGCTACCTTCATCGTCAAGAATCTTGCTAAGATTTTCGATGATGATCTCATCACCATTCTCAATCTCAGACTGGTTCCTTGGGGTGATGCATACGCCAACAAATCGAACAACAGCACCTCTTTCTGTCAGCATAGGCCAGATGGGTGTAAGTTGAATTTTCTGGAAGCATGCGCTATCGATGTTATGCATGATGTGAACAAGCACTTTGCTTTGATTTACTGCATAGAATTTCAGGCCATAGACGGAAGGCACAAGACTTGCTTCAGTTCATTGGGACTGCCTAAGAAACCCAATTTGGATTGCTACAACAGTTCAAATGCAACAAAGGTTCCATATTTAATCATATCTACAAGGATTCATGATGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04612 map04612
Pfam Domains
Protein Families
GILT

Protein Analysis

164

Amino Acids

18.36

Weight (kDa)

6.92

Isoelectric Point (pI)

36.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GILT PF03227 31 - 131 7.6e-24 Gamma interferon inducible lysosomal thiol reductase (GILT)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 280, 353
AcuI CTGAAG 1 cut(s) 373
AgsI TTSAA 2 cut(s) 280, 441
AjuI GAANNNNNNNTTGG 2 cut(s) 404, 436
Alw21I GWGCWC 1 cut(s) 119
Alw26I GTCTC 1 cut(s) 32
AoxI GGCC 3 cut(s) 3, 260, 360
ApoI RAATTY 2 cut(s) 280, 353
AspLEI GCGC 1 cut(s) 299
AsuHPI GGTGA 2 cut(s) 169, 221
Bbv12I GWGCWC 1 cut(s) 119
BccI CCATC 1 cut(s) 260
BcoDI GTCTC 1 cut(s) 32
BmiI GGNNCC 2 cut(s) 201, 456
BmsI GCATC 1 cut(s) 202
Bsa29I ATCGAT 1 cut(s) 303
BsaBI GATNNNNATC 1 cut(s) 168
BsaJI CCNNGG 1 cut(s) 203
Bse1I ACTGG 1 cut(s) 201
Bse8I GATNNNNATC 1 cut(s) 168
BseCI ATCGAT 1 cut(s) 303
BseDI CCNNGG 1 cut(s) 203
BseJI GATNNNNATC 1 cut(s) 168
BseMII CTCAG 1 cut(s) 205
BseNI ACTGG 1 cut(s) 201
BshFI GGCC 3 cut(s) 5, 262, 362
BshVI ATCGAT 1 cut(s) 303
BsiHKAI GWGCWC 1 cut(s) 119
BslFI GGGAC 1 cut(s) 414
BsmAI GTCTC 1 cut(s) 32
BsmFI GGGAC 1 cut(s) 414
BsnI GGCC 3 cut(s) 5, 262, 362
Bsp1286I GDGCHC 1 cut(s) 119
Bsp143I GATC 1 cut(s) 169
BspANI GGCC 3 cut(s) 5, 262, 362
BspCNI CTCAG 1 cut(s) 204
BspDI ATCGAT 1 cut(s) 303
BspHI TCATGA 1 cut(s) 484
BspLI GGNNCC 2 cut(s) 201, 456
BsrI ACTGG 1 cut(s) 201
BssECI CCNNGG 1 cut(s) 203
BssMI GATC 1 cut(s) 169
BssT1I CCWWGG 1 cut(s) 203
Bst4CI ACNGT 1 cut(s) 437
Bst6I CTCTTC 1 cut(s) 23
BstC8I GCNNGC 1 cut(s) 295
BstDEI CTNAG 3 cut(s) 153, 191, 408
BstHHI GCGC 1 cut(s) 299
BstKTI GATC 1 cut(s) 172
BstMAI GTCTC 1 cut(s) 32
BstMBI GATC 1 cut(s) 169
BstNSI RCATGY 1 cut(s) 297
Bsu15I ATCGAT 1 cut(s) 303
BsuRI GGCC 3 cut(s) 5, 262, 362
BsuTUI ATCGAT 1 cut(s) 303
BtsIMutI CAGTG 1 cut(s) 48
Cac8I GCNNGC 1 cut(s) 295
CciI TCATGA 1 cut(s) 484
CfoI GCGC 1 cut(s) 299
ClaI ATCGAT 1 cut(s) 303
CviAII CATG 3 cut(s) 294, 314, 485
CviJI RGCY 3 cut(s) 5, 262, 362
CviKI_1 RGCY 3 cut(s) 5, 262, 362
DdeI CTNAG 3 cut(s) 153, 191, 408
DpnI GATC 1 cut(s) 171
DpnII GATC 1 cut(s) 169
Eam1104I CTCTTC 1 cut(s) 23
EarI CTCTTC 1 cut(s) 23
Eco130I CCWWGG 1 cut(s) 203
Eco57I CTGAAG 1 cut(s) 373
EcoT14I CCWWGG 1 cut(s) 203
EcoT22I ATGCAT 2 cut(s) 217, 315
ErhI CCWWGG 1 cut(s) 203
FaeI CATG 3 cut(s) 297, 317, 488
FalI AAGNNNNNCTT 2 cut(s) 371, 403
FaqI GGGAC 1 cut(s) 414
FatI CATG 3 cut(s) 293, 313, 484
GlaI GCGC 1 cut(s) 298
HaeIII GGCC 3 cut(s) 5, 262, 362
HhaI GCGC 1 cut(s) 299
Hin1II CATG 3 cut(s) 297, 317, 488
Hin6I GCGC 1 cut(s) 297
HinP1I GCGC 1 cut(s) 297
HinfI GANTC 3 cut(s) 107, 145, 481
HphI GGTGA 2 cut(s) 169, 221
Hpy166II GTNNAC 1 cut(s) 322
Hpy188I TCNGA 2 cut(s) 81, 194
Hpy188III TCNNGA 3 cut(s) 142, 287, 485
Hpy8I GTNNAC 1 cut(s) 322
HpyAV CCTTC 2 cut(s) 142, 366
HpyCH4III ACNGT 1 cut(s) 437
HpyCH4V TGCA 4 cut(s) 215, 313, 348, 446
HpyF3I CTNAG 3 cut(s) 153, 191, 408
Hsp92II CATG 3 cut(s) 297, 317, 488
HspAI GCGC 1 cut(s) 297
Kzo9I GATC 1 cut(s) 169
LpnPI CCDG 5 cut(s) 49, 182, 272, 276, 344
LweI GCATC 1 cut(s) 202
MaeIII GTNAC 1 cut(s) 85
MalI GATC 1 cut(s) 171
MboI GATC 1 cut(s) 169
MboII GAAGA 1 cut(s) 10
MhlI GDGCHC 1 cut(s) 119
MluCI AATT 3 cut(s) 280, 353, 418
MlyI GAGTC 1 cut(s) 101
MnlI CCTC 2 cut(s) 16, 253
Mph1103I ATGCAT 2 cut(s) 217, 315
MseI TTAA 2 cut(s) 464, 493
NdeII GATC 1 cut(s) 169
NlaIII CATG 3 cut(s) 297, 317, 488
NlaIV GGNNCC 2 cut(s) 201, 456
NsiI ATGCAT 2 cut(s) 217, 315
NspI RCATGY 1 cut(s) 297
PaeI GCATGC 1 cut(s) 297
PagI TCATGA 1 cut(s) 484
PfeI GAWTC 2 cut(s) 145, 481
PleI GAGTC 1 cut(s) 101
PpsI GAGTC 1 cut(s) 101
PspN4I GGNNCC 2 cut(s) 201, 456
SaqAI TTAA 2 cut(s) 464, 493
Sau3AI GATC 1 cut(s) 169
SchI GAGTC 1 cut(s) 101
SduI GDGCHC 1 cut(s) 119
SetI ASST 4 cut(s) 38, 134, 245, 456
SfaNI GCATC 1 cut(s) 202
SphI GCATGC 1 cut(s) 297
Sse9I AATT 3 cut(s) 280, 353, 418
StyI CCWWGG 1 cut(s) 203
TaaI ACNGT 1 cut(s) 437
TaqI TCGA 3 cut(s) 162, 230, 303
TasI AATT 3 cut(s) 280, 353, 418
TfiI GAWTC 2 cut(s) 145, 481
Tru1I TTAA 2 cut(s) 464, 493
Tru9I TTAA 2 cut(s) 464, 493
TscAI CASTG 1 cut(s) 48
TspDTI ATGAA 3 cut(s) 124, 384, 473
TspGWI ACGGA 1 cut(s) 384
TspRI CASTG 1 cut(s) 48
XapI RAATTY 2 cut(s) 280, 353
XceI RCATGY 1 cut(s) 297
Zsp2I ATGCAT 2 cut(s) 217, 315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.