RchiOBHm_Chr6g0273711

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0001075
Physical Location & Seq
Reverse (-)
34676010 .. 34680993
4984 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24554

Sequence Viewer

Length: 1758 bp
ATGGGTATGTCGCCCGGTTTTCTGGGTCTTTTGCTTCTGTCTCCGGCTCTCCTTTGCATTGTTGAAAGCCATGTCCATTACTATGACTTTGTTTTGAGGGAGAAGAACTTCACAAGGTTATGTAGCACCAAGAGCATGCTGGTAGTGAATGATAGTTTTCCGGGGCCGGTCATTCGAGTGCAGAAAGGAGATACCGTTTACGTGAATGTCCAAAATCAAGGAGATTACGACTTAACAATCCACTGGCATGGAGTACATCAACCAAGAAACCCATGGTCTGATGGTCCTGAGTACATCACGCAGTGTCCCATTGAACCTGGATCAAATTTTACTTACGAGGTTATATTTTCTGACGAGGAAGGAACACTTTGGTGGCACGCTCATAGTGATTGGACCCGATCAAGTGTGCATGGTGCCATTGTTGTTATGCCCTTAAATGAAACAGGCTTTCCATTTCCTGAACCTGATGGAGAAGAAATTGTTGTTCTCGGATCTTGGTATAAAGATGATGTGAACGAGGTAGTCGCGGAGGCCCTTGAAGACGGTGACGACACTCCTCGCTCTGATTGCTACACCATCAATGGACAGCCTGGGGATTTCTTCGCATGCTCCAATGACAGTACCCATCGCTGGGAAGTCGAGCATGGCAAGACCTATCTTCTTCGCATAGTAAATGCAGCGATGAATGCAGAGCTCTACTTTGCTATTGCTGAACATAACCTCACTGTTGTTGGTATGGATGGATCATACGTCAAACCCATCGTCACAGATTTTATCATGATTTGCCCCGGACAAACCATGGATATATTGGTCACAGCCGACCAGCCACTTGGTTGGTACTACATGGCTGCTAGACAATATGACAGCGTTAGGCCAGATGTTACCGACTATGACACATCCAATGTGACGGCAATTCTCGAGTATAAAGGCAATTATACACCCCCGGCACTGCCAATTTTTCCAAGCAACCTCCCTACCTATGAGGATTTGTCGTCTGCAGTAGCCTTCTCAAGCCGTATCTTAAGCTTGGCAAGCACAGAGCACCCAATAAATGTGCCAAAGAATATAACTACCAGAATGTATATAACGACTGAGATGAACAACATTGAATTTGACAATGGTACCGATGAGAGAAGTGGTCTTGCTTCCAGTTTAAATAATGTTAGCTGGGTTAATCCATCAACAGATGTGCTGCTTGCCTACTACAGGAACATGAGTGGGTTTTATACCTCAGACTTTCCTGATTATCCACCATCTTTGTTTGATTTTGTGGCCGAAGATTTGTCGGATGATTATGTTACGACTGTCCAAGGAACAAAGGTTAAGGTGTTAGAGTACAATGAAGAGGTGGAAATAGTGTTTCAGGGTACTAACGTATTAGATGCCTCAGAGGATCATCCAATGCATATGCATGGTTACAGCTTTTATGTAGTTGGAAAAGGTTTTGGAAATTTTGACAACGAAACAGACCCCCAGGTATACAATTTGGTTGATCCACCAAAGATGAACACTGTTTCAGTCCCAAAGAAAGGATGGGTTGCTATCAGATTCAAAGCAAGTAATCCTGGTGTTTGGTTTTGGCACTGTCATTTTGATCGACATCTCAGTTGGGGTATGAACTTTGTGATGATAGTGAAAGATGGGGGAACACCAGAGACGAGCATGCGGAAACCACCTGCATACTTGCCTCCATGTAGTGACTCATCTACCATTAAGCTGCAACCATTTCAGCATAAATTCGGCAGGAAAAGTAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

585

Amino Acids

65.94

Weight (kDa)

4.74

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 33 - 144 4.8e-40 Multicopper oxidase
Cu-oxidase PF00394 160 - 311 7.7e-39 Multicopper oxidase
Cu-oxidase_2 PF07731 413 - 547 8.8e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1684
Acc36I ACCTGC 1 cut(s) 1684
Acc65I GGTACC 1 cut(s) 1121
AccB1I GGYRCC 2 cut(s) 413, 1121
AccI GTMKAC 1 cut(s) 1479
AccII CGCG 1 cut(s) 527
AciI CCGC 2 cut(s) 527, 1666
AclWI GGATC 5 cut(s) 328, 499, 751, 1401, 1487
AcoI YGGCCR 1 cut(s) 1272
AcsI RAATTY 4 cut(s) 325, 1109, 1450, 1736
AdeI CACNNNGTG 1 cut(s) 303
AfaI GTAC 7 cut(s) 255, 293, 622, 839, 1123, 1337, 1369
AfiI CCNNNNNNNGG 4 cut(s) 630, 631, 1206, 1529
AflII CTTAAG 1 cut(s) 1021
AgsI TTSAA 5 cut(s) 65, 314, 539, 1109, 1552
AjnI CCWGG 4 cut(s) 316, 589, 1473, 1564
AleI CACNNNNGTG 1 cut(s) 370
AluBI AGCT 5 cut(s) 694, 1026, 1167, 1422, 1717
AluI AGCT 5 cut(s) 694, 1026, 1167, 1422, 1717
Alw21I GWGCWC 2 cut(s) 696, 1044
Alw26I GTCTC 2 cut(s) 45, 1649
AlwI GGATC 5 cut(s) 328, 499, 751, 1401, 1487
Ama87I CYCGRG 1 cut(s) 917
AoxI GGCC 4 cut(s) 164, 531, 872, 1272
ApeKI GCWGC 4 cut(s) 677, 848, 1192, 1717
ApoI RAATTY 4 cut(s) 325, 1109, 1450, 1736
ArsI GACNNNNNNTTYG 2 cut(s) 747, 779
Asp700I GAANNNNTTC 1 cut(s) 107
Asp718I GGTACC 1 cut(s) 1121
AspS9I GGNCC 4 cut(s) 164, 284, 393, 532
AsuC2I CCSGG 4 cut(s) 15, 162, 789, 944
AsuHPI GGTGA 1 cut(s) 557
AvaI CYCGRG 1 cut(s) 917
AvaII GGWCC 2 cut(s) 284, 393
BaeI ACNNNNGTAYC 4 cut(s) 1105, 1138, 1359, 1392
BanI GGYRCC 2 cut(s) 413, 1121
BanII GRGCYC 1 cut(s) 696
BbsI GAAGAC 1 cut(s) 546
Bbv12I GWGCWC 2 cut(s) 696, 1044
BbvI GCAGC 4 cut(s) 689, 835, 1179, 1704
BceAI ACGGC 2 cut(s) 924, 999
BciT130I CCWGG 4 cut(s) 318, 591, 1475, 1566
BcnI CCSGG 4 cut(s) 15, 162, 789, 944
BcoDI GTCTC 2 cut(s) 45, 1649
BfaI CTAG 1 cut(s) 852
BfmI CTRYAG 2 cut(s) 996, 1204
BfrI CTTAAG 1 cut(s) 1021
BfuAI ACCTGC 1 cut(s) 1684
BisI GCNGC 4 cut(s) 678, 849, 1193, 1718
BlsI GCNGC 4 cut(s) 679, 850, 1194, 1719
Bme1390I CCNGG 8 cut(s) 15, 162, 318, 591, 789, 944, 1475, 1566
Bme18I GGWCC 2 cut(s) 284, 393
BmeT110I CYCGRG 1 cut(s) 917
BmgT120I GGNCC 4 cut(s) 164, 284, 393, 532
BmiI GGNNCC 4 cut(s) 165, 395, 415, 1123
BmrFI CCNGG 8 cut(s) 15, 162, 318, 591, 789, 944, 1475, 1566
BmsI GCATC 1 cut(s) 1372
BpiI GAAGAC 1 cut(s) 546
BpuEI CTTGAG 1 cut(s) 994
BpuMI CCSGG 4 cut(s) 15, 162, 789, 944
BsaAI YACGTR 1 cut(s) 202
BsaBI GATNNNNATC 1 cut(s) 1599
BsaJI CCNNGG 8 cut(s) 161, 272, 590, 787, 798, 942, 1309, 1473
BsaXI ACNNNNNCTCC 2 cut(s) 180, 210
Bsc4I CCNNNNNNNGG 4 cut(s) 630, 631, 1206, 1529
Bse118I RCCGGY 1 cut(s) 166
Bse1I ACTGG 2 cut(s) 248, 1149
Bse8I GATNNNNATC 1 cut(s) 1599
BseBI CCWGG 4 cut(s) 318, 591, 1475, 1566
BseDI CCNNGG 8 cut(s) 161, 272, 590, 787, 798, 942, 1309, 1473
BseGI GGATG 5 cut(s) 745, 896, 1294, 1396, 1538
BseJI GATNNNNATC 1 cut(s) 1599
BseLI CCNNNNNNNGG 4 cut(s) 630, 631, 1206, 1529
BseMII CTCAG 5 cut(s) 279, 1083, 1245, 1401, 1618
BseNI ACTGG 2 cut(s) 248, 1149
BseRI GAGGAG 1 cut(s) 546
BseXI GCAGC 4 cut(s) 689, 835, 1179, 1704
BseYI CCCAGC 2 cut(s) 630, 1167
BsgI GTGCAG 1 cut(s) 200
Bsh1236I CGCG 1 cut(s) 527
BshFI GGCC 4 cut(s) 166, 533, 874, 1274
BshNI GGYRCC 2 cut(s) 413, 1121
BsiHKAI GWGCWC 2 cut(s) 696, 1044
BsiHKCI CYCGRG 1 cut(s) 917
BsiSI CCGG 6 cut(s) 15, 44, 161, 167, 789, 944
BslFI GGGAC 2 cut(s) 291, 1505
BslI CCNNNNNNNGG 4 cut(s) 630, 631, 1206, 1529
BsmAI GTCTC 2 cut(s) 45, 1649
BsmBI CGTCTC 1 cut(s) 1649
BsmFI GGGAC 2 cut(s) 291, 1505
BsmI GAATGC 1 cut(s) 691
BsnI GGCC 4 cut(s) 166, 533, 874, 1274
BsoBI CYCGRG 1 cut(s) 917
Bsp1286I GDGCHC 2 cut(s) 696, 1044
Bsp143I GATC 7 cut(s) 320, 398, 491, 743, 1393, 1492, 1594
Bsp19I CCATGG 2 cut(s) 272, 798
BspACI CCGC 2 cut(s) 527, 1666
BspANI GGCC 4 cut(s) 166, 533, 874, 1274
BspCNI CTCAG 5 cut(s) 280, 1084, 1244, 1400, 1617
BspFNI CGCG 1 cut(s) 527
BspHI TCATGA 1 cut(s) 777
BspLI GGNNCC 4 cut(s) 165, 395, 415, 1123
BspMAI CTGCAG 1 cut(s) 1000
BspMI ACCTGC 1 cut(s) 1684
BspPI GGATC 5 cut(s) 328, 499, 751, 1401, 1487
BspT107I GGYRCC 2 cut(s) 413, 1121
BspTI CTTAAG 1 cut(s) 1021
BsrFI RCCGGY 1 cut(s) 166
BsrI ACTGG 2 cut(s) 248, 1149
BssAI RCCGGY 1 cut(s) 166
BssECI CCNNGG 8 cut(s) 161, 272, 590, 787, 798, 942, 1309, 1473
BssMI GATC 7 cut(s) 320, 398, 491, 743, 1393, 1492, 1594
BssNAI GTATAC 1 cut(s) 1480
BssT1I CCWWGG 3 cut(s) 272, 798, 1309
Bst1107I GTATAC 1 cut(s) 1480
Bst2UI CCWGG 4 cut(s) 318, 591, 1475, 1566
Bst4CI ACNGT 7 cut(s) 196, 545, 620, 727, 1306, 1513, 1586
Bst6I CTCTTC 1 cut(s) 1338
BstAFI CTTAAG 1 cut(s) 1021
BstBAI YACGTR 1 cut(s) 202
BstC8I GCNNGC 6 cut(s) 137, 378, 607, 1033, 1197, 1664
BstDEI CTNAG 5 cut(s) 288, 1092, 1231, 1387, 1604
BstDSI CCRYGG 2 cut(s) 272, 798
BstENI CCTNNNNNAGG 1 cut(s) 1204
BstF5I GGATG 5 cut(s) 745, 896, 1294, 1396, 1538
BstFNI CGCG 1 cut(s) 527
BstKTI GATC 7 cut(s) 323, 401, 494, 746, 1396, 1495, 1597
BstMAI GTCTC 2 cut(s) 45, 1649
BstMBI GATC 7 cut(s) 320, 398, 491, 743, 1393, 1492, 1594
BstMWI GCNNNNNNNGC 4 cut(s) 132, 567, 686, 1032
BstNI CCWGG 4 cut(s) 318, 591, 1475, 1566
BstNSI RCATGY 3 cut(s) 139, 609, 1666
BstSCI CCNGG 8 cut(s) 13, 160, 316, 589, 787, 942, 1473, 1564
BstSFI CTRYAG 2 cut(s) 996, 1204
BstUI CGCG 1 cut(s) 527
BstV1I GCAGC 4 cut(s) 689, 835, 1179, 1704
BstV2I GAAGAC 1 cut(s) 546
BstX2I RGATCY 1 cut(s) 491
BstXI CCANNNNNNTGG 3 cut(s) 248, 830, 834
BstYI RGATCY 1 cut(s) 491
BstZ17I GTATAC 1 cut(s) 1480
BsuRI GGCC 4 cut(s) 166, 533, 874, 1274
BtgI CCRYGG 2 cut(s) 272, 798
BtgZI GCGATG 2 cut(s) 611, 695
BtsCI GGATG 5 cut(s) 745, 896, 1294, 1396, 1538
BtsI GCAGTG 2 cut(s) 308, 947
BtsIMutI CAGTG 6 cut(s) 241, 308, 723, 947, 1509, 1582
BveI ACCTGC 1 cut(s) 1684
Cac8I GCNNGC 6 cut(s) 137, 378, 607, 1033, 1197, 1664
CciI TCATGA 1 cut(s) 777
Cfr10I RCCGGY 1 cut(s) 166
Cfr13I GGNCC 4 cut(s) 164, 284, 393, 532
Csp6I GTAC 7 cut(s) 254, 292, 621, 838, 1122, 1336, 1368
CspCI CAANNNNNGTGG 2 cut(s) 1239, 1274
CviQI GTAC 7 cut(s) 254, 292, 621, 838, 1122, 1336, 1368
DdeI CTNAG 5 cut(s) 288, 1092, 1231, 1387, 1604
DpnI GATC 7 cut(s) 322, 400, 493, 745, 1395, 1494, 1596
DpnII GATC 7 cut(s) 320, 398, 491, 743, 1393, 1492, 1594
DraI TTTAAA 1 cut(s) 1155
DraIII CACNNNGTG 1 cut(s) 303
EaeI YGGCCR 1 cut(s) 1272
Eam1104I CTCTTC 1 cut(s) 1338
EarI CTCTTC 1 cut(s) 1338
Ecl136II GAGCTC 1 cut(s) 694
Eco130I CCWWGG 3 cut(s) 272, 798, 1309
Eco24I GRGCYC 1 cut(s) 696
Eco47I GGWCC 2 cut(s) 284, 393
Eco53kI GAGCTC 1 cut(s) 694
Eco88I CYCGRG 1 cut(s) 917
EcoICRI GAGCTC 1 cut(s) 694
EcoNI CCTNNNNNAGG 1 cut(s) 1204
EcoO109I RGGNCCY 1 cut(s) 532
EcoRII CCWGG 4 cut(s) 316, 589, 1473, 1564
EcoT14I CCWWGG 3 cut(s) 272, 798, 1309
EcoT22I ATGCAT 2 cut(s) 1407, 1413
EcoT38I GRGCYC 1 cut(s) 696
ErhI CCWWGG 3 cut(s) 272, 798, 1309
Esp3I CGTCTC 1 cut(s) 1649
FalI AAGNNNNNCTT 2 cut(s) 351, 383
FaqI GGGAC 2 cut(s) 291, 1505
FauNDI CATATG 1 cut(s) 1407
FblI GTMKAC 1 cut(s) 1479
Fnu4HI GCNGC 4 cut(s) 678, 849, 1193, 1718
FokI GGATG 5 cut(s) 752, 883, 1301, 1383, 1545
FriOI GRGCYC 1 cut(s) 696
Fsp4HI GCNGC 4 cut(s) 678, 849, 1193, 1718
FspBI CTAG 1 cut(s) 852
GluI GCNGC 4 cut(s) 678, 849, 1193, 1718
GsaI CCCAGC 2 cut(s) 634, 1171
HaeIII GGCC 4 cut(s) 166, 533, 874, 1274
HapII CCGG 6 cut(s) 15, 44, 161, 167, 789, 944
HindIII AAGCTT 1 cut(s) 1024
HinfI GANTC 2 cut(s) 1548, 1700
HpaII CCGG 6 cut(s) 15, 44, 161, 167, 789, 944
HphI GGTGA 1 cut(s) 557
Hpy166II GTNNAC 3 cut(s) 199, 514, 1480
Hpy188I TCNGA 8 cut(s) 280, 352, 491, 565, 1234, 1288, 1390, 1547
Hpy188III TCNNGA 5 cut(s) 287, 458, 778, 917, 1241
Hpy8I GTNNAC 3 cut(s) 199, 514, 1480
HpyAV CCTTC 2 cut(s) 353, 1015
HpyCH4III ACNGT 7 cut(s) 196, 545, 620, 727, 1306, 1513, 1586
HpyCH4IV ACGT 3 cut(s) 201, 750, 1374
HpyF10VI GCNNNNNNNGC 4 cut(s) 132, 567, 686, 1032
HpyF3I CTNAG 5 cut(s) 288, 1092, 1231, 1387, 1604
HpySE526I ACGT 3 cut(s) 201, 750, 1374
KpnI GGTACC 1 cut(s) 1125
Kzo9I GATC 7 cut(s) 320, 398, 491, 743, 1393, 1492, 1594
LmnI GCTCC 1 cut(s) 614
Lsp1109I GCAGC 4 cut(s) 689, 835, 1179, 1704
LweI GCATC 1 cut(s) 1372
MaeI CTAG 1 cut(s) 852
MaeII ACGT 3 cut(s) 201, 750, 1374
MaeIII GTNAC 8 cut(s) 545, 763, 811, 880, 904, 1297, 1415, 1697
MalI GATC 7 cut(s) 322, 400, 493, 745, 1395, 1494, 1596
MboI GATC 7 cut(s) 320, 398, 491, 743, 1393, 1492, 1594
MboII GAAGA 8 cut(s) 115, 485, 551, 592, 650, 653, 1289, 1355
MflI RGATCY 1 cut(s) 491
MhlI GDGCHC 2 cut(s) 696, 1044
MluCI AATT 9 cut(s) 325, 477, 912, 931, 954, 1109, 1450, 1483, 1736
MlyI GAGTC 1 cut(s) 1694
MmeI TCCRAC 2 cut(s) 1266, 1414
Mph1103I ATGCAT 2 cut(s) 1407, 1413
MroXI GAANNNNTTC 1 cut(s) 107
MseI TTAA 7 cut(s) 233, 434, 1022, 1154, 1173, 1323, 1713
MslI CAYNNNNRTG 5 cut(s) 81, 176, 246, 370, 1410
MspCI CTTAAG 1 cut(s) 1021
MspI CCGG 6 cut(s) 15, 44, 161, 167, 789, 944
MspR9I CCNGG 8 cut(s) 15, 162, 318, 591, 789, 944, 1475, 1566
Mva1269I GAATGC 1 cut(s) 691
MvaI CCWGG 4 cut(s) 318, 591, 1475, 1566
MvnI CGCG 1 cut(s) 527
MwoI GCNNNNNNNGC 4 cut(s) 132, 567, 686, 1032
NciI CCSGG 4 cut(s) 15, 162, 789, 944
NcoI CCATGG 2 cut(s) 272, 798
NdeI CATATG 1 cut(s) 1407
NdeII GATC 7 cut(s) 320, 398, 491, 743, 1393, 1492, 1594
NlaIV GGNNCC 4 cut(s) 165, 395, 415, 1123
NmuCI GTSAC 5 cut(s) 545, 763, 811, 904, 1697
NsiI ATGCAT 2 cut(s) 1407, 1413
NspI RCATGY 3 cut(s) 139, 609, 1666
OliI CACNNNNGTG 1 cut(s) 370
PaeI GCATGC 3 cut(s) 139, 609, 1666
PaeR7I CTCGAG 1 cut(s) 917
PagI TCATGA 1 cut(s) 777
PaqCI CACCTGC 1 cut(s) 1684
PctI GAATGC 1 cut(s) 691
PdmI GAANNNNTTC 1 cut(s) 107
PfeI GAWTC 1 cut(s) 1548
PkrI GCNGC 4 cut(s) 679, 850, 1194, 1719
PleI GAGTC 1 cut(s) 1694
PpsI GAGTC 1 cut(s) 1694
Ppu21I YACGTR 1 cut(s) 202
Psp124BI GAGCTC 1 cut(s) 696
Psp6I CCWGG 4 cut(s) 316, 589, 1473, 1564
PspFI CCCAGC 2 cut(s) 630, 1167
PspGI CCWGG 4 cut(s) 316, 589, 1473, 1564
PspN4I GGNNCC 4 cut(s) 165, 395, 415, 1123
PspPI GGNCC 4 cut(s) 164, 284, 393, 532
PstI CTGCAG 1 cut(s) 1000
PsuI RGATCY 1 cut(s) 491
RsaI GTAC 7 cut(s) 255, 293, 622, 839, 1123, 1337, 1369
RsaNI GTAC 7 cut(s) 254, 292, 621, 838, 1122, 1336, 1368
RseI CAYNNNNRTG 5 cut(s) 81, 176, 246, 370, 1410
SacI GAGCTC 1 cut(s) 696
SaqAI TTAA 7 cut(s) 233, 434, 1022, 1154, 1173, 1323, 1713
SatI GCNGC 4 cut(s) 678, 849, 1193, 1718
Sau3AI GATC 7 cut(s) 320, 398, 491, 743, 1393, 1492, 1594
Sau96I GGNCC 4 cut(s) 164, 284, 393, 532
SchI GAGTC 1 cut(s) 1694
ScrFI CCNGG 8 cut(s) 15, 162, 318, 591, 789, 944, 1475, 1566
SduI GDGCHC 2 cut(s) 696, 1044
SfaNI GCATC 1 cut(s) 1372
SfcI CTRYAG 2 cut(s) 996, 1204
Sfr274I CTCGAG 1 cut(s) 917
SinI GGWCC 2 cut(s) 284, 393
SlaI CTCGAG 1 cut(s) 917
SmiMI CAYNNNNRTG 5 cut(s) 81, 176, 246, 370, 1410
SmlI CTYRAG 3 cut(s) 917, 1009, 1021
SmoI CTYRAG 3 cut(s) 917, 1009, 1021
SphI GCATGC 3 cut(s) 139, 609, 1666
Sse9I AATT 9 cut(s) 325, 477, 912, 931, 954, 1109, 1450, 1483, 1736
SsiI CCGC 2 cut(s) 527, 1666
SspMI CTAG 1 cut(s) 852
SstI GAGCTC 1 cut(s) 696
StyD4I CCNGG 8 cut(s) 13, 160, 316, 589, 787, 942, 1473, 1564
StyI CCWWGG 3 cut(s) 272, 798, 1309
TaaI ACNGT 7 cut(s) 196, 545, 620, 727, 1306, 1513, 1586
TaiI ACGT 3 cut(s) 204, 753, 1377
TaqI TCGA 4 cut(s) 175, 639, 918, 1597
TasI AATT 9 cut(s) 325, 477, 912, 931, 954, 1109, 1450, 1483, 1736
TatI WGTACW 3 cut(s) 253, 291, 1335
TfiI GAWTC 1 cut(s) 1548
Tru1I TTAA 7 cut(s) 233, 434, 1022, 1154, 1173, 1323, 1713
Tru9I TTAA 7 cut(s) 233, 434, 1022, 1154, 1173, 1323, 1713
TscAI CASTG 6 cut(s) 248, 308, 730, 954, 1516, 1589
TseFI GTSAC 5 cut(s) 545, 763, 811, 904, 1697
TseI GCWGC 4 cut(s) 677, 848, 1192, 1717
Tsp45I GTSAC 5 cut(s) 545, 763, 811, 904, 1697
TspDTI ATGAA 6 cut(s) 453, 698, 1112, 1356, 1520, 1631
TspRI CASTG 6 cut(s) 248, 308, 730, 954, 1516, 1589
Vha464I CTTAAG 1 cut(s) 1021
VpaK11BI GGWCC 2 cut(s) 284, 393
XagI CCTNNNNNAGG 1 cut(s) 1204
XapI RAATTY 4 cut(s) 325, 1109, 1450, 1736
XceI RCATGY 3 cut(s) 139, 609, 1666
XcmI CCANNNNNNNNNTGG 4 cut(s) 136, 270, 805, 1530
XhoI CTCGAG 1 cut(s) 917
XmiI GTMKAC 1 cut(s) 1479
XmnI GAANNNNTTC 1 cut(s) 107
XspI CTAG 1 cut(s) 852
Zsp2I ATGCAT 2 cut(s) 1407, 1413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.