RchiOBHm_Chr7g0179381

UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
1675875 .. 1678643
2769 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ15990

Sequence Viewer

Length: 1317 bp
ATGGCCGCCGCCGCCGTCACCGCCGGCTTCGGTCACCTCTCTTTCGTCCCCAAGTTCCCATCAACCCAAGTCAGGACCTTTGACTTCAAGATCACCTCCTGTCTCTCTCTAAGGCAGTCAAATGACCCAACTCTCGCCTCCCAAAACGACGCCGTCCCGTTCGGCAGCCTCCGTGTAGTCTTCGCCACCGGTGGCACCGGCGGCCACATATACCCGGCCGTCGCCATAGCCGACGAGCTCAAAAGCACAGACCCCAACGCCCAGATTTTGTTTCTTGGCATACCCAAAAGCATGGAAAGCAAGGCCGTCCCCAACGCCGGCTACGACTTCGCCGCCGTCCCCTCCGCCAAGTTGCACCGCCCGATTTTGTCACCCAGAAACGTGTTTCTTCCCTATTACTTGATCAAGTCAATAGTATGGAGCTACTTTAAATTGAGGGAGTTTGATCCTAATGTTGTGATCGGAACCGGCGGGTATGTGTCTTTTCCGGTAGGCATTGCGGCGGTGCTGAGAGGAGTGAAGCTTGTGATTCAAGAACAGAATGCTGTTCCCGGAATAGCCAATTGGGTGCTTTCTTTTTTAGCTGATGTTGTGTTTGTGGCTTTTAATTCTACTATTGATTGTTTCCCAAGTGGGAATGGCAAGTGTGTGGTGTGTGGGAATCCGGTGAGGTCGTCCTTAAGGCAGAATGTGTCTAAGGCGGTGGCCAGGGGGCGGTTTTTTCCTAAGTCTGGTGAGATGGGAGAGGAGGAGGTGGAGAAGGTGAAGGTGCTTTTGGTGCTTGGAGGGTCTTTAGGTGCTAATGCCGTGAACATTGCTATGCTGAATTTGTATTATCAGATGCTGTTGGAGAAGGAGGACTTGTTCATCATTTGGCAGACTGGAGTGGAGACCTATAATGAGATGGAGAGCCTTGTTAAGAACCATCCGCGGCTCCTTTTGAAGCCGTTCATGCATAAAATGGATCTGGCATATGCAGCTGCAGACCTAATAGTTTCGCGAGCTGGTGCAATGACTTGTGATGAGATCTTGGCAACTGGGAAGCCTTCCATTCTGATACCATCACCAGATGTTGCTGAAGGATATCAATTCAAAAATGCTTCTTTGATGGCAGACTTGGCAGGTGCAAGGGTTATAACTGAAGATGAACTTGATTCGACAACCCTTGGAAATGCAATTGAAGAGATATTAGGGGATGAAAGTAAAATGGCAGATATGTCCGAGAAGGCTCTGAAAGCTGCGAACTCCAATGCCTCTGTAGCGATTGCACAGCATGTCCTTTCTCTAGTCAGCTTATCAAGAGCAAAGAAGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

438

Amino Acids

47.13

Weight (kDa)

7.01

Isoelectric Point (pI)

39.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_28 PF03033 59 - 199 5.8e-32 Glycosyltransferase family 28 N-terminal domain
Glyco_tran_28_C PF04101 257 - 414 1.8e-33 Glycosyltransferase family 28 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1136
AarI CACCTGC 1 cut(s) 1112
Acc36I ACCTGC 1 cut(s) 1112
AccB1I GGYRCC 1 cut(s) 194
AccII CGCG 2 cut(s) 931, 1000
AclWI GGATC 2 cut(s) 440, 972
AcoI YGGCCR 4 cut(s) 3, 202, 216, 705
AcsI RAATTY 1 cut(s) 826
AcuI CTGAAG 2 cut(s) 1098, 1161
AcyI GRCGYC 1 cut(s) 150
AfiI CCNNNNNNNGG 4 cut(s) 72, 317, 714, 731
AflII CTTAAG 1 cut(s) 679
AflIII ACRYGT 1 cut(s) 381
AgeI ACCGGT 1 cut(s) 188
AgsI TTSAA 5 cut(s) 88, 533, 943, 1093, 1181
AjnI CCWGG 1 cut(s) 707
AjuI GAANNNNNNNTTGG 4 cut(s) 547, 579, 758, 790
AloI GAACNNNNNNTCC 2 cut(s) 848, 880
AluBI AGCT 8 cut(s) 238, 423, 523, 584, 980, 1004, 1238, 1293
AluI AGCT 8 cut(s) 238, 423, 523, 584, 980, 1004, 1238, 1293
Alw21I GWGCWC 1 cut(s) 240
Alw26I GTCTC 2 cut(s) 107, 884
AlwI GGATC 2 cut(s) 440, 972
AlwNI CAGNNNCTG 1 cut(s) 844
AoxI GGCC 5 cut(s) 3, 202, 216, 303, 705
ApeKI GCWGC 4 cut(s) 165, 977, 980, 1238
ApoI RAATTY 1 cut(s) 826
AsiGI ACCGGT 1 cut(s) 188
Asp700I GAANNNNTTC 1 cut(s) 947
AspS9I GGNCC 1 cut(s) 75
AsuC2I CCSGG 2 cut(s) 215, 552
AsuHPI GGTGA 8 cut(s) 10, 26, 85, 363, 679, 746, 775, 1056
AvaII GGWCC 1 cut(s) 75
BalI TGGCCA 1 cut(s) 707
BanI GGYRCC 1 cut(s) 194
BanII GRGCYC 1 cut(s) 240
BbsI GAAGAC 1 cut(s) 172
Bbv12I GWGCWC 1 cut(s) 240
BbvI GCAGC 4 cut(s) 177, 967, 989, 1225
BccI CCATC 6 cut(s) 67, 733, 898, 933, 1069, 1102
BceAI ACGGC 6 cut(s) 137, 203, 290, 320, 791, 931
BciT130I CCWGG 1 cut(s) 709
BclI TGATCA 1 cut(s) 402
BcnI CCSGG 2 cut(s) 215, 552
BcoDI GTCTC 2 cut(s) 107, 884
BfaI CTAG 1 cut(s) 1286
BfmI CTRYAG 2 cut(s) 981, 1257
BfrI CTTAAG 1 cut(s) 679
BfuAI ACCTGC 1 cut(s) 1112
BglII AGATCT 1 cut(s) 1026
Bme1390I CCNGG 3 cut(s) 215, 552, 709
Bme18I GGWCC 1 cut(s) 75
BmgT120I GGNCC 1 cut(s) 75
BmiI GGNNCC 3 cut(s) 196, 466, 935
BmrFI CCNGG 3 cut(s) 215, 552, 709
BmrI ACTGGG 1 cut(s) 1047
BmsI GCATC 1 cut(s) 831
BmuI ACTGGG 1 cut(s) 1047
BpiI GAAGAC 1 cut(s) 172
BpmI CTGGAG 1 cut(s) 903
BpuMI CCSGG 2 cut(s) 215, 552
BsaHI GRCGYC 1 cut(s) 150
BsaI GGTCTC 1 cut(s) 884
BsaJI CCNNGG 3 cut(s) 708, 929, 1165
BsaWI WCCGGW 3 cut(s) 188, 487, 664
BsaXI ACNNNNNCTCC 2 cut(s) 848, 878
Bsc4I CCNNNNNNNGG 4 cut(s) 72, 317, 714, 731
Bse118I RCCGGY 5 cut(s) 23, 188, 197, 317, 467
Bse1I ACTGG 2 cut(s) 886, 1042
Bse3DI GCAATG 3 cut(s) 495, 813, 1017
BseBI CCWGG 1 cut(s) 709
BseDI CCNNGG 3 cut(s) 708, 929, 1165
BseGI GGATG 2 cut(s) 925, 1201
BseLI CCNNNNNNNGG 4 cut(s) 72, 317, 714, 731
BseMI GCAATG 3 cut(s) 495, 813, 1017
BseMII CTCAG 1 cut(s) 500
BseNI ACTGG 2 cut(s) 886, 1042
BseRI GAGGAG 3 cut(s) 528, 761, 764
BseX3I CGGCCG 1 cut(s) 216
BseXI GCAGC 4 cut(s) 177, 967, 989, 1225
Bsh1236I CGCG 2 cut(s) 931, 1000
Bsh1285I CGRYCG 1 cut(s) 219
BshFI GGCC 5 cut(s) 5, 204, 218, 305, 707
BshNI GGYRCC 1 cut(s) 194
BshTI ACCGGT 1 cut(s) 188
BsiEI CGRYCG 1 cut(s) 219
BsiHKAI GWGCWC 1 cut(s) 240
BsiSI CCGG 9 cut(s) 24, 189, 198, 215, 318, 468, 488, 552, 665
BslFI GGGAC 4 cut(s) 32, 140, 293, 323
BslI CCNNNNNNNGG 4 cut(s) 72, 317, 714, 731
BsmAI GTCTC 2 cut(s) 107, 884
BsmFI GGGAC 4 cut(s) 32, 140, 293, 323
BsmI GAATGC 1 cut(s) 547
BsnI GGCC 5 cut(s) 5, 204, 218, 305, 707
Bso31I GGTCTC 1 cut(s) 884
Bsp1286I GDGCHC 1 cut(s) 240
Bsp143I GATC 6 cut(s) 90, 402, 445, 459, 964, 1026
Bsp68I TCGCGA 1 cut(s) 1000
BspANI GGCC 5 cut(s) 5, 204, 218, 305, 707
BspCNI CTCAG 1 cut(s) 501
BspFNI CGCG 2 cut(s) 931, 1000
BspLI GGNNCC 3 cut(s) 196, 466, 935
BspMAI CTGCAG 1 cut(s) 985
BspMI ACCTGC 1 cut(s) 1112
BspPI GGATC 2 cut(s) 440, 972
BspT107I GGYRCC 1 cut(s) 194
BspTI CTTAAG 1 cut(s) 679
BspTNI GGTCTC 1 cut(s) 884
BsrDI GCAATG 3 cut(s) 495, 813, 1017
BsrFI RCCGGY 5 cut(s) 23, 188, 197, 317, 467
BsrI ACTGG 2 cut(s) 886, 1042
BssAI RCCGGY 5 cut(s) 23, 188, 197, 317, 467
BssECI CCNNGG 3 cut(s) 708, 929, 1165
BssMI GATC 6 cut(s) 90, 402, 445, 459, 964, 1026
BssNI GRCGYC 1 cut(s) 150
BssT1I CCWWGG 1 cut(s) 1165
Bst2UI CCWGG 1 cut(s) 709
Bst6I CTCTTC 1 cut(s) 1176
BstACI GRCGYC 1 cut(s) 150
BstAFI CTTAAG 1 cut(s) 679
BstC8I GCNNGC 3 cut(s) 25, 319, 1002
BstDEI CTNAG 4 cut(s) 110, 509, 696, 726
BstDSI CCRYGG 1 cut(s) 929
BstEII GGTNACC 1 cut(s) 32
BstF5I GGATG 2 cut(s) 925, 1201
BstFNI CGCG 2 cut(s) 931, 1000
BstKTI GATC 6 cut(s) 93, 405, 448, 462, 967, 1029
BstMAI GTCTC 2 cut(s) 107, 884
BstMBI GATC 6 cut(s) 90, 402, 445, 459, 964, 1026
BstMCI CGRYCG 1 cut(s) 219
BstNI CCWGG 1 cut(s) 709
BstNSI RCATGY 1 cut(s) 1277
BstPI GGTNACC 1 cut(s) 32
BstSCI CCNGG 3 cut(s) 213, 550, 707
BstSFI CTRYAG 2 cut(s) 981, 1257
BstUI CGCG 2 cut(s) 931, 1000
BstV1I GCAGC 4 cut(s) 177, 967, 989, 1225
BstV2I GAAGAC 1 cut(s) 172
BstX2I RGATCY 2 cut(s) 964, 1026
BstXI CCANNNNNNTGG 1 cut(s) 292
BstYI RGATCY 2 cut(s) 964, 1026
BstZI CGGCCG 1 cut(s) 216
BsuRI GGCC 5 cut(s) 5, 204, 218, 305, 707
BtgI CCRYGG 1 cut(s) 929
BtsCI GGATG 2 cut(s) 925, 1201
BtuMI TCGCGA 1 cut(s) 1000
BveI ACCTGC 1 cut(s) 1112
Cac8I GCNNGC 3 cut(s) 25, 319, 1002
CaiI CAGNNNCTG 1 cut(s) 844
Cfr10I RCCGGY 5 cut(s) 23, 188, 197, 317, 467
Cfr13I GGNCC 1 cut(s) 75
Cfr42I CCGCGG 1 cut(s) 932
CseI GACGC 1 cut(s) 158
CspAI ACCGGT 1 cut(s) 188
CviAII CATG 3 cut(s) 292, 952, 1274
DdeI CTNAG 4 cut(s) 110, 509, 696, 726
DpnI GATC 6 cut(s) 92, 404, 447, 461, 966, 1028
DpnII GATC 6 cut(s) 90, 402, 445, 459, 964, 1026
DraI TTTAAA 1 cut(s) 430
EaeI YGGCCR 4 cut(s) 3, 202, 216, 705
EagI CGGCCG 1 cut(s) 216
Eam1104I CTCTTC 1 cut(s) 1176
EarI CTCTTC 1 cut(s) 1176
EciI GGCGGA 1 cut(s) 334
Ecl136II GAGCTC 1 cut(s) 238
EclXI CGGCCG 1 cut(s) 216
Eco130I CCWWGG 1 cut(s) 1165
Eco24I GRGCYC 1 cut(s) 240
Eco31I GGTCTC 1 cut(s) 884
Eco32I GATATC 1 cut(s) 1085
Eco47I GGWCC 1 cut(s) 75
Eco52I CGGCCG 1 cut(s) 216
Eco53kI GAGCTC 1 cut(s) 238
Eco57I CTGAAG 2 cut(s) 1098, 1161
Eco91I GGTNACC 1 cut(s) 32
EcoICRI GAGCTC 1 cut(s) 238
EcoO109I RGGNCCY 1 cut(s) 75
EcoO65I GGTNACC 1 cut(s) 32
EcoRII CCWGG 1 cut(s) 707
EcoRV GATATC 1 cut(s) 1085
EcoT14I CCWWGG 1 cut(s) 1165
EcoT22I ATGCAT 1 cut(s) 957
EcoT38I GRGCYC 1 cut(s) 240
ErhI CCWWGG 1 cut(s) 1165
FaeI CATG 3 cut(s) 295, 955, 1277
FalI AAGNNNNNCTT 4 cut(s) 845, 877, 1134, 1166
FaqI GGGAC 4 cut(s) 32, 140, 293, 323
FatI CATG 3 cut(s) 291, 951, 1273
FauI CCCGC 1 cut(s) 464
FauNDI CATATG 1 cut(s) 973
FbaI TGATCA 1 cut(s) 402
FokI GGATG 2 cut(s) 912, 1208
FriOI GRGCYC 1 cut(s) 240
FspBI CTAG 1 cut(s) 1286
GsuI CTGGAG 1 cut(s) 903
HaeIII GGCC 5 cut(s) 5, 204, 218, 305, 707
HapII CCGG 9 cut(s) 24, 189, 198, 215, 318, 468, 488, 552, 665
HgaI GACGC 1 cut(s) 158
Hin1I GRCGYC 1 cut(s) 150
Hin1II CATG 3 cut(s) 295, 955, 1277
HindIII AAGCTT 1 cut(s) 521
HinfI GANTC 3 cut(s) 529, 661, 1154
HpaII CCGG 9 cut(s) 24, 189, 198, 215, 318, 468, 488, 552, 665
HphI GGTGA 8 cut(s) 10, 26, 85, 363, 679, 746, 775, 1056
Hpy166II GTNNAC 1 cut(s) 811
Hpy188I TCNGA 5 cut(s) 464, 840, 1056, 1222, 1233
Hpy188III TCNNGA 5 cut(s) 73, 88, 533, 999, 1299
Hpy8I GTNNAC 1 cut(s) 811
Hpy99I CGWCG 3 cut(s) 152, 224, 236
HpyAV CCTTC 6 cut(s) 754, 760, 847, 1056, 1073, 1219
HpyCH4IV ACGT 1 cut(s) 381
HpyCH4V TGCA 8 cut(s) 355, 955, 977, 983, 1010, 1127, 1175, 1268
HpyF3I CTNAG 4 cut(s) 110, 509, 696, 726
HpySE526I ACGT 1 cut(s) 381
Hsp92I GRCGYC 1 cut(s) 150
Hsp92II CATG 3 cut(s) 295, 955, 1277
KroI GCCGGC 2 cut(s) 23, 317
KroNI GCCGGC 2 cut(s) 25, 319
Ksp22I TGATCA 1 cut(s) 402
KspI CCGCGG 1 cut(s) 932
Kzo9I GATC 6 cut(s) 90, 402, 445, 459, 964, 1026
LmnI GCTCC 2 cut(s) 420, 939
Lsp1109I GCAGC 4 cut(s) 177, 967, 989, 1225
LweI GCATC 1 cut(s) 831
MaeI CTAG 1 cut(s) 1286
MaeII ACGT 1 cut(s) 381
MaeIII GTNAC 3 cut(s) 16, 32, 369
MalI GATC 6 cut(s) 92, 404, 447, 461, 966, 1028
MboI GATC 6 cut(s) 90, 402, 445, 459, 964, 1026
MboII GAAGA 4 cut(s) 172, 380, 1154, 1193
MfeI CAATTG 2 cut(s) 562, 1176
MflI RGATCY 2 cut(s) 964, 1026
MhlI GDGCHC 1 cut(s) 240
MlsI TGGCCA 1 cut(s) 707
MluCI AATT 6 cut(s) 431, 562, 607, 826, 1088, 1176
MluNI TGGCCA 1 cut(s) 707
MmeI TCCRAC 1 cut(s) 828
Mox20I TGGCCA 1 cut(s) 707
Mph1103I ATGCAT 1 cut(s) 957
MroNI GCCGGC 2 cut(s) 23, 317
MroXI GAANNNNTTC 1 cut(s) 947
MscI TGGCCA 1 cut(s) 707
MseI TTAA 4 cut(s) 429, 606, 680, 918
MslI CAYNNNNRTG 1 cut(s) 818
Msp20I TGGCCA 1 cut(s) 707
MspA1I CMGCKG 2 cut(s) 931, 980
MspCI CTTAAG 1 cut(s) 679
MspI CCGG 9 cut(s) 24, 189, 198, 215, 318, 468, 488, 552, 665
MspR9I CCNGG 3 cut(s) 215, 552, 709
MunI CAATTG 2 cut(s) 562, 1176
Mva1269I GAATGC 1 cut(s) 547
MvaI CCWGG 1 cut(s) 709
MvnI CGCG 2 cut(s) 931, 1000
NaeI GCCGGC 2 cut(s) 25, 319
NciI CCSGG 2 cut(s) 215, 552
NdeI CATATG 1 cut(s) 973
NdeII GATC 6 cut(s) 90, 402, 445, 459, 964, 1026
NgoMIV GCCGGC 2 cut(s) 23, 317
NlaIII CATG 3 cut(s) 295, 955, 1277
NlaIV GGNNCC 3 cut(s) 196, 466, 935
NmuCI GTSAC 3 cut(s) 16, 32, 369
NruI TCGCGA 1 cut(s) 1000
NsiI ATGCAT 1 cut(s) 957
NspI RCATGY 1 cut(s) 1277
PaqCI CACCTGC 1 cut(s) 1112
PcsI WCGNNNNNNNCGW 2 cut(s) 228, 321
PctI GAATGC 1 cut(s) 547
PdiI GCCGGC 2 cut(s) 25, 319
PdmI GAANNNNTTC 1 cut(s) 947
PfeI GAWTC 3 cut(s) 529, 661, 1154
PflFI GACNNNGTC 1 cut(s) 152
PfoI TCCNGGA 1 cut(s) 550
PinAI ACCGGT 1 cut(s) 188
PpuMI RGGWCCY 1 cut(s) 75
PsiI TTATAA 1 cut(s) 1136
Psp124BI GAGCTC 1 cut(s) 240
Psp5II RGGWCCY 1 cut(s) 75
Psp6I CCWGG 1 cut(s) 707
PspEI GGTNACC 1 cut(s) 32
PspGI CCWGG 1 cut(s) 707
PspN4I GGNNCC 3 cut(s) 196, 466, 935
PspPI GGNCC 1 cut(s) 75
PspPPI RGGWCCY 1 cut(s) 75
PstI CTGCAG 1 cut(s) 985
PstNI CAGNNNCTG 1 cut(s) 844
PsuI RGATCY 2 cut(s) 964, 1026
PsyI GACNNNGTC 1 cut(s) 152
PvuII CAGCTG 1 cut(s) 980
RruI TCGCGA 1 cut(s) 1000
RseI CAYNNNNRTG 1 cut(s) 818
SacI GAGCTC 1 cut(s) 240
SacII CCGCGG 1 cut(s) 932
SaqAI TTAA 4 cut(s) 429, 606, 680, 918
Sau3AI GATC 6 cut(s) 90, 402, 445, 459, 964, 1026
Sau96I GGNCC 1 cut(s) 75
ScrFI CCNGG 3 cut(s) 215, 552, 709
SduI GDGCHC 1 cut(s) 240
SfaNI GCATC 1 cut(s) 831
SfcI CTRYAG 2 cut(s) 981, 1257
Sfr303I CCGCGG 1 cut(s) 932
SgrAI CRCCGGYG 2 cut(s) 188, 197
SgrBI CCGCGG 1 cut(s) 932
SinI GGWCC 1 cut(s) 75
SmiMI CAYNNNNRTG 1 cut(s) 818
SmlI CTYRAG 1 cut(s) 679
SmoI CTYRAG 1 cut(s) 679
Sse9I AATT 6 cut(s) 431, 562, 607, 826, 1088, 1176
SspMI CTAG 1 cut(s) 1286
SstI GAGCTC 1 cut(s) 240
StyD4I CCNGG 3 cut(s) 213, 550, 707
StyI CCWWGG 1 cut(s) 1165
TaiI ACGT 1 cut(s) 384
TaqI TCGA 1 cut(s) 1157
TaqII GACCGA 1 cut(s) 20
TasI AATT 6 cut(s) 431, 562, 607, 826, 1088, 1176
TauI GCSGC 7 cut(s) 8, 11, 14, 204, 335, 503, 934
TfiI GAWTC 3 cut(s) 529, 661, 1154
Tru1I TTAA 4 cut(s) 429, 606, 680, 918
Tru9I TTAA 4 cut(s) 429, 606, 680, 918
TseFI GTSAC 3 cut(s) 16, 32, 369
TseI GCWGC 4 cut(s) 165, 977, 980, 1238
Tsp45I GTSAC 3 cut(s) 16, 32, 369
TspDTI ATGAA 4 cut(s) 856, 940, 1161, 1212
TspGWI ACGGA 1 cut(s) 161
Tth111I GACNNNGTC 1 cut(s) 152
Vha464I CTTAAG 1 cut(s) 679
VpaK11BI GGWCC 1 cut(s) 75
XapI RAATTY 1 cut(s) 826
XceI RCATGY 1 cut(s) 1277
XmnI GAANNNNTTC 1 cut(s) 947
XspI CTAG 1 cut(s) 1286
Zsp2I ATGCAT 1 cut(s) 957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.