Rw7G001880

UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
1551244 .. 1553576
2333 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G001880.1

Sequence Viewer

Length: 1194 bp
ATGGCCGTCACCGCCGGCTTCGGTCACCTCTCTTTCGTCCCCAAGTTCCCATCAACCCAAGTCAGGACCTTTGACTTCAAGATCACCTCCTTCTTCGCCACCGGTGGCACCGGCGGCCACATATACCCGGCCGTCGCCATAGCCGACGAGCTCAAAAGCACAGACCCCAACGCCCAGATTTTGTTTCTTGGCATACCCAAAAGCATGGAAAGCAAGGCCGTCCCCAACGCCGGCTACGACTTCGCCGCCGTCCCCTCCGCCAAGTTGCTCCGCCCGATTTTGTCACCCAGAAACGTGTTTCTTCCCTACTACTTGATCAAGTCAATAATATGGAGCTACTTTAAATTGAGGGAGTTTGATCCTCATGTTGTGATCGGAACCGGCGGGTATGTGTCTTTTCCGGTAGGCATTGCGGCGGTGCTCAGAGGAGTGAAGCTTGTGATTCAAGAACAGAATGCTGTTCCCGGAATAGCCAATTGGGTGCTTTCTTTTTTAGCTGATGTGTGTTTTGGGAGTGGCAAGTGTGTGGTGTGTGGGAATCCGGTGAGGTCGTTCTTAAGGCAGAATGTGTCTAAGGCGGTGGCGAGGGGGCGGTTTTTTCCTAAGTCTGGTGAGATGGGAGAGGAGGAGGTGGAGAAGGTGAAGGTGCTTTTGGTGCTTGGAGGGTCTTTAGGTGCTAATGCCGTGAACATTGCTATGCTGAATTTGTATTATCAGATGCTGTTGGAGAAGGAGGACTTGTTCATCATTTGGCAGACTGGAGTGGAGGCCTATAATGAGATGGAGAGCCTTGTTAAGAACCATCCGCGGCTCCTTTTGAAGCCGTTCATGCATAAAATGGATCTGGCATATGCAGCTGCAGACCTAATAGTTTCGCGAGCTGGTGCAATGACTTGTGATGAGATCTTGGCAACTGGGAAGCCTTCCATTCTGATACCATCACCAGATGTTGCTGAAGGACATCAATTCAAAAATGCTTCTTTGATGGCAGACTTGGCAGGTGCAAGCGTTATAACTGAAGATGAACTTGATTCGACAACCCTTGGAAATGCAATTGAAGAGATATTAGGGGATGAAAGTAAAATGGCAGATATGTCCGAGAAGGCTCTGAAAGCTGCAAACTCCAATGCCTCTGTAGTGATTGCACAGCATGTCCTTTCTCTAGTCAGCTTATCAAGAGCAAAGAAGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

397

Amino Acids

42.86

Weight (kDa)

7.05

Isoelectric Point (pI)

36.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_28 PF03033 32 - 167 2.4e-30 Glycosyltransferase family 28 N-terminal domain
Glyco_tran_28_C PF04101 216 - 373 1.1e-34 Glycosyltransferase family 28 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1013
AarI CACCTGC 1 cut(s) 989
Acc36I ACCTGC 1 cut(s) 989
AccB1I GGYRCC 1 cut(s) 107
AccII CGCG 2 cut(s) 808, 877
AclWI GGATC 2 cut(s) 353, 849
AcoI YGGCCR 3 cut(s) 3, 115, 129
AcsI RAATTY 1 cut(s) 703
AcuI CTGAAG 2 cut(s) 975, 1038
AfiI CCNNNNNNNGG 3 cut(s) 63, 230, 608
AflII CTTAAG 1 cut(s) 556
AflIII ACRYGT 1 cut(s) 294
AgeI ACCGGT 1 cut(s) 101
AgsI TTSAA 5 cut(s) 79, 446, 820, 970, 1058
AjuI GAANNNNNNNTTGG 4 cut(s) 460, 492, 635, 667
AloI GAACNNNNNNTCC 2 cut(s) 725, 757
AluBI AGCT 8 cut(s) 151, 336, 436, 497, 857, 881, 1115, 1170
AluI AGCT 8 cut(s) 151, 336, 436, 497, 857, 881, 1115, 1170
Alw21I GWGCWC 2 cut(s) 153, 423
AlwI GGATC 2 cut(s) 353, 849
AlwNI CAGNNNCTG 1 cut(s) 721
AoxI GGCC 5 cut(s) 3, 115, 129, 216, 768
ApeKI GCWGC 3 cut(s) 854, 857, 1115
ApoI RAATTY 1 cut(s) 703
AsiGI ACCGGT 1 cut(s) 101
Asp700I GAANNNNTTC 1 cut(s) 824
AspS9I GGNCC 1 cut(s) 66
AsuC2I CCSGG 2 cut(s) 128, 465
AsuHPI GGTGA 7 cut(s) 17, 76, 276, 556, 623, 652, 933
AvaII GGWCC 1 cut(s) 66
BanI GGYRCC 1 cut(s) 107
BanII GRGCYC 1 cut(s) 153
Bbv12I GWGCWC 2 cut(s) 153, 423
BbvI GCAGC 3 cut(s) 844, 866, 1102
BccI CCATC 6 cut(s) 58, 610, 775, 810, 946, 979
BceAI ACGGC 5 cut(s) 116, 203, 233, 668, 808
BclI TGATCA 1 cut(s) 315
BcnI CCSGG 2 cut(s) 128, 465
BfaI CTAG 1 cut(s) 1163
BfmI CTRYAG 2 cut(s) 858, 1134
BfrI CTTAAG 1 cut(s) 556
BfuAI ACCTGC 1 cut(s) 989
BglII AGATCT 1 cut(s) 903
BisI GCNGC 7 cut(s) 115, 246, 414, 809, 855, 858, 1116
BlsI GCNGC 7 cut(s) 116, 247, 415, 810, 856, 859, 1117
Bme1390I CCNGG 2 cut(s) 128, 465
Bme18I GGWCC 1 cut(s) 66
BmgT120I GGNCC 1 cut(s) 66
BmiI GGNNCC 3 cut(s) 109, 379, 812
BmrFI CCNGG 2 cut(s) 128, 465
BmrI ACTGGG 1 cut(s) 924
BmsI GCATC 1 cut(s) 708
BmuI ACTGGG 1 cut(s) 924
BpmI CTGGAG 1 cut(s) 780
BpuMI CCSGG 2 cut(s) 128, 465
BsaJI CCNNGG 2 cut(s) 806, 1042
BsaWI WCCGGW 3 cut(s) 101, 400, 541
BsaXI ACNNNNNCTCC 2 cut(s) 725, 755
Bsc4I CCNNNNNNNGG 3 cut(s) 63, 230, 608
Bse118I RCCGGY 5 cut(s) 14, 101, 110, 230, 380
Bse1I ACTGG 2 cut(s) 763, 919
Bse3DI GCAATG 3 cut(s) 408, 690, 894
BseDI CCNNGG 2 cut(s) 806, 1042
BseGI GGATG 2 cut(s) 802, 1078
BseLI CCNNNNNNNGG 3 cut(s) 63, 230, 608
BseMI GCAATG 3 cut(s) 408, 690, 894
BseMII CTCAG 1 cut(s) 436
BseNI ACTGG 2 cut(s) 763, 919
BseRI GAGGAG 3 cut(s) 441, 638, 641
BseX3I CGGCCG 1 cut(s) 129
BseXI GCAGC 3 cut(s) 844, 866, 1102
Bsh1236I CGCG 2 cut(s) 808, 877
Bsh1285I CGRYCG 1 cut(s) 132
BshFI GGCC 5 cut(s) 5, 117, 131, 218, 770
BshNI GGYRCC 1 cut(s) 107
BshTI ACCGGT 1 cut(s) 101
BsiEI CGRYCG 1 cut(s) 132
BsiHKAI GWGCWC 2 cut(s) 153, 423
BsiSI CCGG 9 cut(s) 15, 102, 111, 128, 231, 381, 401, 465, 542
BslFI GGGAC 3 cut(s) 23, 206, 236
BslI CCNNNNNNNGG 3 cut(s) 63, 230, 608
BsmFI GGGAC 3 cut(s) 23, 206, 236
BsmI GAATGC 1 cut(s) 460
BsnI GGCC 5 cut(s) 5, 117, 131, 218, 770
Bsp1286I GDGCHC 2 cut(s) 153, 423
Bsp143I GATC 6 cut(s) 81, 315, 358, 372, 841, 903
Bsp68I TCGCGA 1 cut(s) 877
BspANI GGCC 5 cut(s) 5, 117, 131, 218, 770
BspCNI CTCAG 1 cut(s) 435
BspFNI CGCG 2 cut(s) 808, 877
BspLI GGNNCC 3 cut(s) 109, 379, 812
BspMAI CTGCAG 1 cut(s) 862
BspMI ACCTGC 1 cut(s) 989
BspPI GGATC 2 cut(s) 353, 849
BspT107I GGYRCC 1 cut(s) 107
BspTI CTTAAG 1 cut(s) 556
BsrDI GCAATG 3 cut(s) 408, 690, 894
BsrFI RCCGGY 5 cut(s) 14, 101, 110, 230, 380
BsrI ACTGG 2 cut(s) 763, 919
BssAI RCCGGY 5 cut(s) 14, 101, 110, 230, 380
BssECI CCNNGG 2 cut(s) 806, 1042
BssMI GATC 6 cut(s) 81, 315, 358, 372, 841, 903
BssT1I CCWWGG 1 cut(s) 1042
Bst6I CTCTTC 1 cut(s) 1053
BstAFI CTTAAG 1 cut(s) 556
BstC8I GCNNGC 4 cut(s) 16, 232, 879, 1006
BstDEI CTNAG 3 cut(s) 422, 573, 603
BstDSI CCRYGG 1 cut(s) 806
BstEII GGTNACC 1 cut(s) 23
BstF5I GGATG 2 cut(s) 802, 1078
BstFNI CGCG 2 cut(s) 808, 877
BstKTI GATC 6 cut(s) 84, 318, 361, 375, 844, 906
BstMBI GATC 6 cut(s) 81, 315, 358, 372, 841, 903
BstMCI CGRYCG 1 cut(s) 132
BstMWI GCNNNNNNNGC 8 cut(s) 11, 114, 210, 655, 829, 854, 995, 1112
BstNSI RCATGY 1 cut(s) 1154
BstPI GGTNACC 1 cut(s) 23
BstSCI CCNGG 2 cut(s) 126, 463
BstSFI CTRYAG 2 cut(s) 858, 1134
BstUI CGCG 2 cut(s) 808, 877
BstV1I GCAGC 3 cut(s) 844, 866, 1102
BstX2I RGATCY 2 cut(s) 841, 903
BstXI CCANNNNNNTGG 1 cut(s) 205
BstYI RGATCY 2 cut(s) 841, 903
BstZI CGGCCG 1 cut(s) 129
BsuRI GGCC 5 cut(s) 5, 117, 131, 218, 770
BtgI CCRYGG 1 cut(s) 806
BtsCI GGATG 2 cut(s) 802, 1078
BtuMI TCGCGA 1 cut(s) 877
BveI ACCTGC 1 cut(s) 989
Cac8I GCNNGC 4 cut(s) 16, 232, 879, 1006
CaiI CAGNNNCTG 1 cut(s) 721
Cfr10I RCCGGY 5 cut(s) 14, 101, 110, 230, 380
Cfr13I GGNCC 1 cut(s) 66
Cfr42I CCGCGG 1 cut(s) 809
CspAI ACCGGT 1 cut(s) 101
CviAII CATG 4 cut(s) 205, 365, 829, 1151
DdeI CTNAG 3 cut(s) 422, 573, 603
DpnI GATC 6 cut(s) 83, 317, 360, 374, 843, 905
DpnII GATC 6 cut(s) 81, 315, 358, 372, 841, 903
DraI TTTAAA 1 cut(s) 343
EaeI YGGCCR 3 cut(s) 3, 115, 129
EagI CGGCCG 1 cut(s) 129
Eam1104I CTCTTC 1 cut(s) 1053
EarI CTCTTC 1 cut(s) 1053
EciI GGCGGA 2 cut(s) 247, 260
Ecl136II GAGCTC 1 cut(s) 151
EclXI CGGCCG 1 cut(s) 129
Eco130I CCWWGG 1 cut(s) 1042
Eco147I AGGCCT 1 cut(s) 770
Eco24I GRGCYC 1 cut(s) 153
Eco47I GGWCC 1 cut(s) 66
Eco52I CGGCCG 1 cut(s) 129
Eco53kI GAGCTC 1 cut(s) 151
Eco57I CTGAAG 2 cut(s) 975, 1038
Eco91I GGTNACC 1 cut(s) 23
EcoICRI GAGCTC 1 cut(s) 151
EcoO109I RGGNCCY 1 cut(s) 66
EcoO65I GGTNACC 1 cut(s) 23
EcoT14I CCWWGG 1 cut(s) 1042
EcoT22I ATGCAT 1 cut(s) 834
EcoT38I GRGCYC 1 cut(s) 153
ErhI CCWWGG 1 cut(s) 1042
FaeI CATG 4 cut(s) 208, 368, 832, 1154
FalI AAGNNNNNCTT 4 cut(s) 722, 754, 1011, 1043
FaqI GGGAC 3 cut(s) 23, 206, 236
FatI CATG 4 cut(s) 204, 364, 828, 1150
FauI CCCGC 1 cut(s) 377
FauNDI CATATG 1 cut(s) 850
FbaI TGATCA 1 cut(s) 315
Fnu4HI GCNGC 7 cut(s) 115, 246, 414, 809, 855, 858, 1116
FokI GGATG 2 cut(s) 789, 1085
FriOI GRGCYC 1 cut(s) 153
Fsp4HI GCNGC 7 cut(s) 115, 246, 414, 809, 855, 858, 1116
FspBI CTAG 1 cut(s) 1163
GluI GCNGC 7 cut(s) 115, 246, 414, 809, 855, 858, 1116
GsuI CTGGAG 1 cut(s) 780
HaeIII GGCC 5 cut(s) 5, 117, 131, 218, 770
HapII CCGG 9 cut(s) 15, 102, 111, 128, 231, 381, 401, 465, 542
Hin1II CATG 4 cut(s) 208, 368, 832, 1154
HindIII AAGCTT 1 cut(s) 434
HinfI GANTC 3 cut(s) 442, 538, 1031
HpaII CCGG 9 cut(s) 15, 102, 111, 128, 231, 381, 401, 465, 542
HphI GGTGA 7 cut(s) 17, 76, 276, 556, 623, 652, 933
Hpy166II GTNNAC 1 cut(s) 688
Hpy188I TCNGA 6 cut(s) 377, 425, 717, 933, 1099, 1110
Hpy188III TCNNGA 5 cut(s) 64, 79, 446, 876, 1176
Hpy8I GTNNAC 1 cut(s) 688
Hpy99I CGWCG 2 cut(s) 137, 149
HpyAV CCTTC 7 cut(s) 100, 631, 637, 724, 933, 950, 1096
HpyCH4IV ACGT 1 cut(s) 294
HpyCH4V TGCA 8 cut(s) 832, 854, 860, 887, 1004, 1052, 1118, 1145
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 114, 210, 655, 829, 854, 995, 1112
HpyF3I CTNAG 3 cut(s) 422, 573, 603
HpySE526I ACGT 1 cut(s) 294
Hsp92II CATG 4 cut(s) 208, 368, 832, 1154
KroI GCCGGC 2 cut(s) 14, 230
KroNI GCCGGC 2 cut(s) 16, 232
Ksp22I TGATCA 1 cut(s) 315
KspI CCGCGG 1 cut(s) 809
Kzo9I GATC 6 cut(s) 81, 315, 358, 372, 841, 903
LmnI GCTCC 3 cut(s) 273, 333, 816
Lsp1109I GCAGC 3 cut(s) 844, 866, 1102
LweI GCATC 1 cut(s) 708
MaeI CTAG 1 cut(s) 1163
MaeII ACGT 1 cut(s) 294
MaeIII GTNAC 3 cut(s) 7, 23, 282
MalI GATC 6 cut(s) 83, 317, 360, 374, 843, 905
MboI GATC 6 cut(s) 81, 315, 358, 372, 841, 903
MboII GAAGA 4 cut(s) 85, 293, 1031, 1070
MfeI CAATTG 2 cut(s) 475, 1053
MflI RGATCY 2 cut(s) 841, 903
MhlI GDGCHC 2 cut(s) 153, 423
MluCI AATT 5 cut(s) 344, 475, 703, 965, 1053
MmeI TCCRAC 1 cut(s) 705
Mph1103I ATGCAT 1 cut(s) 834
MroNI GCCGGC 2 cut(s) 14, 230
MroXI GAANNNNTTC 1 cut(s) 824
MseI TTAA 3 cut(s) 342, 557, 795
MslI CAYNNNNRTG 1 cut(s) 695
MspA1I CMGCKG 2 cut(s) 808, 857
MspCI CTTAAG 1 cut(s) 556
MspI CCGG 9 cut(s) 15, 102, 111, 128, 231, 381, 401, 465, 542
MspR9I CCNGG 2 cut(s) 128, 465
MunI CAATTG 2 cut(s) 475, 1053
Mva1269I GAATGC 1 cut(s) 460
MvnI CGCG 2 cut(s) 808, 877
MwoI GCNNNNNNNGC 8 cut(s) 11, 114, 210, 655, 829, 854, 995, 1112
NaeI GCCGGC 2 cut(s) 16, 232
NciI CCSGG 2 cut(s) 128, 465
NdeI CATATG 1 cut(s) 850
NdeII GATC 6 cut(s) 81, 315, 358, 372, 841, 903
NgoMIV GCCGGC 2 cut(s) 14, 230
NlaIII CATG 4 cut(s) 208, 368, 832, 1154
NlaIV GGNNCC 3 cut(s) 109, 379, 812
NmuCI GTSAC 3 cut(s) 7, 23, 282
NruI TCGCGA 1 cut(s) 877
NsiI ATGCAT 1 cut(s) 834
NspI RCATGY 1 cut(s) 1154
PaqCI CACCTGC 1 cut(s) 989
PceI AGGCCT 1 cut(s) 770
PcsI WCGNNNNNNNCGW 2 cut(s) 141, 234
PctI GAATGC 1 cut(s) 460
PdiI GCCGGC 2 cut(s) 16, 232
PdmI GAANNNNTTC 1 cut(s) 824
PfeI GAWTC 3 cut(s) 442, 538, 1031
PfoI TCCNGGA 1 cut(s) 463
PinAI ACCGGT 1 cut(s) 101
PkrI GCNGC 7 cut(s) 116, 247, 415, 810, 856, 859, 1117
PpuMI RGGWCCY 1 cut(s) 66
PsiI TTATAA 1 cut(s) 1013
Psp124BI GAGCTC 1 cut(s) 153
Psp5II RGGWCCY 1 cut(s) 66
PspEI GGTNACC 1 cut(s) 23
PspN4I GGNNCC 3 cut(s) 109, 379, 812
PspPI GGNCC 1 cut(s) 66
PspPPI RGGWCCY 1 cut(s) 66
PstI CTGCAG 1 cut(s) 862
PstNI CAGNNNCTG 1 cut(s) 721
PsuI RGATCY 2 cut(s) 841, 903
PvuII CAGCTG 1 cut(s) 857
RruI TCGCGA 1 cut(s) 877
RseI CAYNNNNRTG 1 cut(s) 695
SacI GAGCTC 1 cut(s) 153
SacII CCGCGG 1 cut(s) 809
SaqAI TTAA 3 cut(s) 342, 557, 795
SatI GCNGC 7 cut(s) 115, 246, 414, 809, 855, 858, 1116
Sau3AI GATC 6 cut(s) 81, 315, 358, 372, 841, 903
Sau96I GGNCC 1 cut(s) 66
ScrFI CCNGG 2 cut(s) 128, 465
SduI GDGCHC 2 cut(s) 153, 423
SfaNI GCATC 1 cut(s) 708
SfcI CTRYAG 2 cut(s) 858, 1134
Sfr303I CCGCGG 1 cut(s) 809
SgrAI CRCCGGYG 2 cut(s) 101, 110
SgrBI CCGCGG 1 cut(s) 809
SinI GGWCC 1 cut(s) 66
SmiMI CAYNNNNRTG 1 cut(s) 695
SmlI CTYRAG 1 cut(s) 556
SmoI CTYRAG 1 cut(s) 556
Sse9I AATT 5 cut(s) 344, 475, 703, 965, 1053
SseBI AGGCCT 1 cut(s) 770
SspMI CTAG 1 cut(s) 1163
SstI GAGCTC 1 cut(s) 153
StuI AGGCCT 1 cut(s) 770
StyD4I CCNGG 2 cut(s) 126, 463
StyI CCWWGG 1 cut(s) 1042
TaiI ACGT 1 cut(s) 297
TaqI TCGA 1 cut(s) 1034
TaqII GACCGA 1 cut(s) 11
TasI AATT 5 cut(s) 344, 475, 703, 965, 1053
TauI GCSGC 4 cut(s) 117, 248, 416, 811
TfiI GAWTC 3 cut(s) 442, 538, 1031
Tru1I TTAA 3 cut(s) 342, 557, 795
Tru9I TTAA 3 cut(s) 342, 557, 795
TseFI GTSAC 3 cut(s) 7, 23, 282
TseI GCWGC 3 cut(s) 854, 857, 1115
Tsp45I GTSAC 3 cut(s) 7, 23, 282
TspDTI ATGAA 4 cut(s) 733, 817, 1038, 1089
Vha464I CTTAAG 1 cut(s) 556
VpaK11BI GGWCC 1 cut(s) 66
XapI RAATTY 1 cut(s) 703
XceI RCATGY 1 cut(s) 1154
XmnI GAANNNNTTC 1 cut(s) 824
XspI CTAG 1 cut(s) 1163
Zsp2I ATGCAT 1 cut(s) 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.