Belongs to the FPP GGPP synthase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| polyprenyl_synt | PF00348 | 183 - 300 | 2.1e-16 | Polyprenyl synthetase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 132 |
| AccII | CGCG | 4 cut(s) | 110, 233, 518, 716 |
| AccIII | TCCGGA | 1 cut(s) | 418 |
| AclWI | GGATC | 3 cut(s) | 500, 574, 592 |
| AcoI | YGGCCR | 2 cut(s) | 180, 347 |
| AcyI | GRCGYC | 2 cut(s) | 129, 449 |
| AfaI | GTAC | 1 cut(s) | 881 |
| AfeI | AGCGCT | 1 cut(s) | 702 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 27, 285, 382, 383, 405, 425, 775, 844 |
| AgsI | TTSAA | 2 cut(s) | 391, 914 |
| AjiI | CACGTC | 1 cut(s) | 859 |
| AjnI | CCWGG | 6 cut(s) | 21, 278, 398, 424, 462, 873 |
| AluBI | AGCT | 8 cut(s) | 7, 115, 145, 238, 268, 437, 784, 905 |
| AluI | AGCT | 8 cut(s) | 7, 115, 145, 238, 268, 437, 784, 905 |
| Alw21I | GWGCWC | 3 cut(s) | 72, 726, 873 |
| AlwI | GGATC | 3 cut(s) | 500, 574, 592 |
| Aor13HI | TCCGGA | 1 cut(s) | 418 |
| Aor51HI | AGCGCT | 1 cut(s) | 702 |
| AoxI | GGCC | 6 cut(s) | 180, 347, 396, 413, 466, 561 |
| ApeKI | GCWGC | 4 cut(s) | 62, 371, 477, 639 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 702 |
| AspLEI | GCGC | 3 cut(s) | 518, 569, 703 |
| AspS9I | GGNCC | 2 cut(s) | 276, 466 |
| AsuC2I | CCSGG | 1 cut(s) | 790 |
| AsuHPI | GGTGA | 1 cut(s) | 452 |
| AvaII | GGWCC | 1 cut(s) | 276 |
| BalI | TGGCCA | 1 cut(s) | 182 |
| BbsI | GAAGAC | 1 cut(s) | 681 |
| Bbv12I | GWGCWC | 3 cut(s) | 72, 726, 873 |
| BbvI | GCAGC | 4 cut(s) | 74, 383, 464, 626 |
| BccI | CCATC | 7 cut(s) | 160, 172, 283, 295, 325, 376, 463 |
| BceAI | ACGGC | 4 cut(s) | 334, 554, 598, 758 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 166, 200, 289, 323, 501, 535, 662, 696 |
| BciT130I | CCWGG | 6 cut(s) | 23, 280, 400, 426, 464, 875 |
| BcnI | CCSGG | 1 cut(s) | 790 |
| BfaI | CTAG | 2 cut(s) | 728, 759 |
| BfoI | RGCGCY | 1 cut(s) | 704 |
| BglII | AGATCT | 1 cut(s) | 336 |
| BisI | GCNGC | 9 cut(s) | 32, 63, 108, 231, 372, 452, 478, 561, 640 |
| BlsI | GCNGC | 9 cut(s) | 33, 64, 109, 232, 373, 453, 479, 562, 641 |
| Bme1390I | CCNGG | 7 cut(s) | 23, 280, 400, 426, 464, 790, 875 |
| Bme18I | GGWCC | 1 cut(s) | 276 |
| BmgBI | CACGTC | 1 cut(s) | 859 |
| BmgT120I | GGNCC | 2 cut(s) | 276, 466 |
| BmiI | GGNNCC | 1 cut(s) | 423 |
| BmrFI | CCNGG | 7 cut(s) | 23, 280, 400, 426, 464, 790, 875 |
| BmsI | GCATC | 5 cut(s) | 48, 73, 109, 232, 756 |
| BpiI | GAAGAC | 1 cut(s) | 681 |
| BpmI | CTGGAG | 2 cut(s) | 887, 896 |
| BpuMI | CCSGG | 1 cut(s) | 790 |
| BsaBI | GATNNNNATC | 2 cut(s) | 335, 504 |
| BsaHI | GRCGYC | 2 cut(s) | 129, 449 |
| BsaJI | CCNNGG | 9 cut(s) | 21, 108, 231, 279, 377, 399, 425, 463, 774 |
| BsaWI | WCCGGW | 1 cut(s) | 418 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 72, 102 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 27, 285, 382, 383, 405, 425, 775, 844 |
| Bse118I | RCCGGY | 1 cut(s) | 556 |
| Bse1I | ACTGG | 2 cut(s) | 320, 870 |
| Bse8I | GATNNNNATC | 2 cut(s) | 335, 504 |
| BseAI | TCCGGA | 1 cut(s) | 418 |
| BseBI | CCWGG | 6 cut(s) | 23, 280, 400, 426, 464, 875 |
| BseDI | CCNNGG | 9 cut(s) | 21, 108, 231, 279, 377, 399, 425, 463, 774 |
| BseGI | GGATG | 6 cut(s) | 18, 145, 171, 294, 387, 765 |
| BseJI | GATNNNNATC | 2 cut(s) | 335, 504 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 27, 285, 382, 383, 405, 425, 775, 844 |
| BseMII | CTCAG | 2 cut(s) | 531, 834 |
| BseNI | ACTGG | 2 cut(s) | 320, 870 |
| BseRI | GAGGAG | 2 cut(s) | 371, 374 |
| BseXI | GCAGC | 4 cut(s) | 74, 383, 464, 626 |
| Bsh1236I | CGCG | 4 cut(s) | 110, 233, 518, 716 |
| Bsh1285I | CGRYCG | 1 cut(s) | 720 |
| BshFI | GGCC | 6 cut(s) | 182, 349, 398, 415, 468, 563 |
| BsiEI | CGRYCG | 1 cut(s) | 720 |
| BsiHKAI | GWGCWC | 3 cut(s) | 72, 726, 873 |
| BsiSI | CCGG | 4 cut(s) | 197, 419, 557, 790 |
| BslFI | GGGAC | 1 cut(s) | 876 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 27, 285, 382, 383, 405, 425, 775, 844 |
| BsmFI | GGGAC | 1 cut(s) | 876 |
| BsnI | GGCC | 6 cut(s) | 182, 349, 398, 415, 468, 563 |
| Bsp1286I | GDGCHC | 3 cut(s) | 72, 726, 873 |
| Bsp13I | TCCGGA | 1 cut(s) | 418 |
| Bsp143I | GATC | 6 cut(s) | 336, 505, 525, 579, 597, 631 |
| BspANI | GGCC | 6 cut(s) | 182, 349, 398, 415, 468, 563 |
| BspCNI | CTCAG | 2 cut(s) | 532, 835 |
| BspEI | TCCGGA | 1 cut(s) | 418 |
| BspFNI | CGCG | 4 cut(s) | 110, 233, 518, 716 |
| BspLI | GGNNCC | 1 cut(s) | 423 |
| BspPI | GGATC | 3 cut(s) | 500, 574, 592 |
| BspQI | GCTCTTC | 2 cut(s) | 774, 912 |
| BsrFI | RCCGGY | 1 cut(s) | 556 |
| BsrI | ACTGG | 2 cut(s) | 320, 870 |
| BssAI | RCCGGY | 1 cut(s) | 556 |
| BssECI | CCNNGG | 9 cut(s) | 21, 108, 231, 279, 377, 399, 425, 463, 774 |
| BssMI | GATC | 6 cut(s) | 336, 505, 525, 579, 597, 631 |
| BssNI | GRCGYC | 2 cut(s) | 129, 449 |
| Bst2UI | CCWGG | 6 cut(s) | 23, 280, 400, 426, 464, 875 |
| Bst4CI | ACNGT | 1 cut(s) | 742 |
| Bst6I | CTCTTC | 3 cut(s) | 208, 774, 912 |
| BstACI | GRCGYC | 2 cut(s) | 129, 449 |
| BstC8I | GCNNGC | 6 cut(s) | 72, 520, 558, 565, 694, 786 |
| BstDEI | CTNAG | 3 cut(s) | 470, 540, 843 |
| BstDSI | CCRYGG | 4 cut(s) | 108, 231, 377, 774 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 283, 403 |
| BstF5I | GGATG | 6 cut(s) | 18, 145, 171, 294, 387, 765 |
| BstFNI | CGCG | 4 cut(s) | 110, 233, 518, 716 |
| BstH2I | RGCGCY | 1 cut(s) | 704 |
| BstHHI | GCGC | 3 cut(s) | 518, 569, 703 |
| BstKTI | GATC | 6 cut(s) | 339, 508, 528, 582, 600, 634 |
| BstMBI | GATC | 6 cut(s) | 336, 505, 525, 579, 597, 631 |
| BstMCI | CGRYCG | 1 cut(s) | 720 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 71, 193, 316, 474, 566, 689, 698 |
| BstNI | CCWGG | 6 cut(s) | 23, 280, 400, 426, 464, 875 |
| BstSCI | CCNGG | 7 cut(s) | 21, 278, 398, 424, 462, 788, 873 |
| BstUI | CGCG | 4 cut(s) | 110, 233, 518, 716 |
| BstV1I | GCAGC | 4 cut(s) | 74, 383, 464, 626 |
| BstV2I | GAAGAC | 1 cut(s) | 681 |
| BstX2I | RGATCY | 1 cut(s) | 336 |
| BstYI | RGATCY | 1 cut(s) | 336 |
| BsuRI | GGCC | 6 cut(s) | 182, 349, 398, 415, 468, 563 |
| BtgI | CCRYGG | 4 cut(s) | 108, 231, 377, 774 |
| BtgZI | GCGATG | 2 cut(s) | 191, 314 |
| BtrI | CACGTC | 1 cut(s) | 859 |
| BtsCI | GGATG | 6 cut(s) | 18, 145, 171, 294, 387, 765 |
| BtsIMutI | CAGTG | 1 cut(s) | 327 |
| Cac8I | GCNNGC | 6 cut(s) | 72, 520, 558, 565, 694, 786 |
| CfoI | GCGC | 3 cut(s) | 518, 569, 703 |
| Cfr10I | RCCGGY | 1 cut(s) | 556 |
| Cfr13I | GGNCC | 2 cut(s) | 276, 466 |
| Cfr42I | CCGCGG | 2 cut(s) | 111, 234 |
| CseI | GACGC | 3 cut(s) | 118, 457, 483 |
| Csp6I | GTAC | 1 cut(s) | 880 |
| CviAII | CATG | 2 cut(s) | 184, 553 |
| CviQI | GTAC | 1 cut(s) | 880 |
| DdeI | CTNAG | 3 cut(s) | 470, 540, 843 |
| DpnI | GATC | 6 cut(s) | 338, 507, 527, 581, 599, 633 |
| DpnII | GATC | 6 cut(s) | 336, 505, 525, 579, 597, 631 |
| EaeI | YGGCCR | 2 cut(s) | 180, 347 |
| Eam1104I | CTCTTC | 3 cut(s) | 208, 774, 912 |
| EarI | CTCTTC | 3 cut(s) | 208, 774, 912 |
| EciI | GGCGGA | 1 cut(s) | 49 |
| Eco147I | AGGCCT | 2 cut(s) | 398, 415 |
| Eco32I | GATATC | 1 cut(s) | 835 |
| Eco47I | GGWCC | 1 cut(s) | 276 |
| Eco47III | AGCGCT | 1 cut(s) | 702 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 283, 403 |
| EcoO109I | RGGNCCY | 2 cut(s) | 276, 466 |
| EcoRII | CCWGG | 6 cut(s) | 21, 278, 398, 424, 462, 873 |
| EcoRV | GATATC | 1 cut(s) | 835 |
| EcoT22I | ATGCAT | 1 cut(s) | 749 |
| FaeI | CATG | 2 cut(s) | 187, 556 |
| FaiI | YATR | 8 cut(s) | 126, 185, 249, 308, 554, 620, 745, 884 |
| FaqI | GGGAC | 1 cut(s) | 876 |
| FatI | CATG | 2 cut(s) | 183, 552 |
| FauI | CCCGC | 1 cut(s) | 811 |
| FblI | GTMKAC | 1 cut(s) | 132 |
| Fnu4HI | GCNGC | 9 cut(s) | 32, 63, 108, 231, 372, 452, 478, 561, 640 |
| FokI | GGATG | 6 cut(s) | 25, 152, 178, 301, 394, 752 |
| Fsp4HI | GCNGC | 9 cut(s) | 32, 63, 108, 231, 372, 452, 478, 561, 640 |
| FspBI | CTAG | 2 cut(s) | 728, 759 |
| GlaI | GCGC | 3 cut(s) | 517, 568, 702 |
| GluI | GCNGC | 9 cut(s) | 32, 63, 108, 231, 372, 452, 478, 561, 640 |
| GsuI | CTGGAG | 2 cut(s) | 887, 896 |
| HaeII | RGCGCY | 1 cut(s) | 704 |
| HaeIII | GGCC | 6 cut(s) | 182, 349, 398, 415, 468, 563 |
| HapII | CCGG | 4 cut(s) | 197, 419, 557, 790 |
| HgaI | GACGC | 3 cut(s) | 118, 457, 483 |
| HhaI | GCGC | 3 cut(s) | 518, 569, 703 |
| Hin1I | GRCGYC | 2 cut(s) | 129, 449 |
| Hin1II | CATG | 2 cut(s) | 187, 556 |
| Hin6I | GCGC | 3 cut(s) | 516, 567, 701 |
| HinP1I | GCGC | 3 cut(s) | 516, 567, 701 |
| HincII | GTYRAC | 2 cut(s) | 133, 256 |
| HindII | GTYRAC | 2 cut(s) | 133, 256 |
| HinfI | GANTC | 3 cut(s) | 200, 542, 762 |
| HpaII | CCGG | 4 cut(s) | 197, 419, 557, 790 |
| HphI | GGTGA | 1 cut(s) | 452 |
| Hpy166II | GTNNAC | 3 cut(s) | 133, 256, 738 |
| Hpy188III | TCNNGA | 4 cut(s) | 419, 574, 759, 911 |
| Hpy8I | GTNNAC | 3 cut(s) | 133, 256, 738 |
| Hpy99I | CGWCG | 6 cut(s) | 134, 137, 316, 451, 608, 860 |
| HpyAV | CCTTC | 3 cut(s) | 388, 721, 765 |
| HpyCH4III | ACNGT | 1 cut(s) | 742 |
| HpyCH4IV | ACGT | 3 cut(s) | 314, 678, 858 |
| HpyCH4V | TGCA | 4 cut(s) | 86, 223, 683, 747 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 71, 193, 316, 474, 566, 689, 698 |
| HpyF3I | CTNAG | 3 cut(s) | 470, 540, 843 |
| HpySE526I | ACGT | 3 cut(s) | 314, 678, 858 |
| Hsp92I | GRCGYC | 2 cut(s) | 129, 449 |
| Hsp92II | CATG | 2 cut(s) | 187, 556 |
| HspAI | GCGC | 3 cut(s) | 516, 567, 701 |
| Kpn2I | TCCGGA | 1 cut(s) | 418 |
| KroI | GCCGGC | 1 cut(s) | 556 |
| KroNI | GCCGGC | 1 cut(s) | 558 |
| KspI | CCGCGG | 2 cut(s) | 111, 234 |
| Kzo9I | GATC | 6 cut(s) | 336, 505, 525, 579, 597, 631 |
| LguI | GCTCTTC | 2 cut(s) | 774, 912 |
| LmnI | GCTCC | 5 cut(s) | 4, 36, 112, 235, 868 |
| Lsp1109I | GCAGC | 4 cut(s) | 74, 383, 464, 626 |
| LweI | GCATC | 5 cut(s) | 48, 73, 109, 232, 756 |
| MaeI | CTAG | 2 cut(s) | 728, 759 |
| MaeII | ACGT | 3 cut(s) | 314, 678, 858 |
| MaeIII | GTNAC | 1 cut(s) | 547 |
| MalI | GATC | 6 cut(s) | 338, 507, 527, 581, 599, 633 |
| MboI | GATC | 6 cut(s) | 336, 505, 525, 579, 597, 631 |
| MflI | RGATCY | 1 cut(s) | 336 |
| MhlI | GDGCHC | 3 cut(s) | 72, 726, 873 |
| MlsI | TGGCCA | 1 cut(s) | 182 |
| MluCI | AATT | 1 cut(s) | 897 |
| MluNI | TGGCCA | 1 cut(s) | 182 |
| MlyI | GAGTC | 2 cut(s) | 194, 551 |
| MmeI | TCCRAC | 3 cut(s) | 333, 783, 879 |
| Mox20I | TGGCCA | 1 cut(s) | 182 |
| Mph1103I | ATGCAT | 1 cut(s) | 749 |
| MroI | TCCGGA | 1 cut(s) | 418 |
| MroNI | GCCGGC | 1 cut(s) | 556 |
| MroXI | GAANNNNTTC | 1 cut(s) | 702 |
| MscI | TGGCCA | 1 cut(s) | 182 |
| Msp20I | TGGCCA | 1 cut(s) | 182 |
| MspA1I | CMGCKG | 4 cut(s) | 65, 110, 233, 639 |
| MspI | CCGG | 4 cut(s) | 197, 419, 557, 790 |
| MspR9I | CCNGG | 7 cut(s) | 23, 280, 400, 426, 464, 790, 875 |
| MvaI | CCWGG | 6 cut(s) | 23, 280, 400, 426, 464, 875 |
| MvnI | CGCG | 4 cut(s) | 110, 233, 518, 716 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 71, 193, 316, 474, 566, 689, 698 |
| NaeI | GCCGGC | 1 cut(s) | 558 |
| NciI | CCSGG | 1 cut(s) | 790 |
| NdeII | GATC | 6 cut(s) | 336, 505, 525, 579, 597, 631 |
| NgoMIV | GCCGGC | 1 cut(s) | 556 |
| NlaIII | CATG | 2 cut(s) | 187, 556 |
| NlaIV | GGNNCC | 1 cut(s) | 423 |
| NsiI | ATGCAT | 1 cut(s) | 749 |
| PceI | AGGCCT | 2 cut(s) | 398, 415 |
| PciSI | GCTCTTC | 2 cut(s) | 774, 912 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 126, 675 |
| PdiI | GCCGGC | 1 cut(s) | 558 |
| PdmI | GAANNNNTTC | 1 cut(s) | 702 |
| PfeI | GAWTC | 1 cut(s) | 762 |
| PkrI | GCNGC | 9 cut(s) | 33, 64, 109, 232, 373, 453, 479, 562, 641 |
| PleI | GAGTC | 2 cut(s) | 194, 550 |
| PpsI | GAGTC | 2 cut(s) | 194, 550 |
| PpuMI | RGGWCCY | 1 cut(s) | 276 |
| Psp5II | RGGWCCY | 1 cut(s) | 276 |
| Psp6I | CCWGG | 6 cut(s) | 21, 278, 398, 424, 462, 873 |
| PspGI | CCWGG | 6 cut(s) | 21, 278, 398, 424, 462, 873 |
| PspN4I | GGNNCC | 1 cut(s) | 423 |
| PspPI | GGNCC | 2 cut(s) | 276, 466 |
| PspPPI | RGGWCCY | 1 cut(s) | 276 |
| PsuI | RGATCY | 1 cut(s) | 336 |
| RsaI | GTAC | 1 cut(s) | 881 |
| RsaNI | GTAC | 1 cut(s) | 880 |
| SacII | CCGCGG | 2 cut(s) | 111, 234 |
| SalI | GTCGAC | 1 cut(s) | 131 |
| SapI | GCTCTTC | 2 cut(s) | 774, 912 |
| SatI | GCNGC | 9 cut(s) | 32, 63, 108, 231, 372, 452, 478, 561, 640 |
| Sau3AI | GATC | 6 cut(s) | 336, 505, 525, 579, 597, 631 |
| Sau96I | GGNCC | 2 cut(s) | 276, 466 |
| SchI | GAGTC | 2 cut(s) | 194, 551 |
| ScrFI | CCNGG | 7 cut(s) | 23, 280, 400, 426, 464, 790, 875 |
| SduI | GDGCHC | 3 cut(s) | 72, 726, 873 |
| SfaNI | GCATC | 5 cut(s) | 48, 73, 109, 232, 756 |
| Sfr303I | CCGCGG | 2 cut(s) | 111, 234 |
| SgrBI | CCGCGG | 2 cut(s) | 111, 234 |
| SgrDI | CGTCGACG | 1 cut(s) | 131 |
| SinI | GGWCC | 1 cut(s) | 276 |
| Sse9I | AATT | 1 cut(s) | 897 |
| SseBI | AGGCCT | 2 cut(s) | 398, 415 |
| SspMI | CTAG | 2 cut(s) | 728, 759 |
| StuI | AGGCCT | 2 cut(s) | 398, 415 |
| StyD4I | CCNGG | 7 cut(s) | 21, 278, 398, 424, 462, 788, 873 |
| TaaI | ACNGT | 1 cut(s) | 742 |
| TaiI | ACGT | 3 cut(s) | 317, 681, 861 |
| TaqI | TCGA | 6 cut(s) | 90, 132, 410, 446, 720, 750 |
| TasI | AATT | 1 cut(s) | 897 |
| TatI | WGTACW | 1 cut(s) | 879 |
| TauI | GCSGC | 5 cut(s) | 34, 110, 233, 454, 563 |
| TfiI | GAWTC | 1 cut(s) | 762 |
| TscAI | CASTG | 1 cut(s) | 327 |
| TseI | GCWGC | 4 cut(s) | 62, 371, 477, 639 |
| TspRI | CASTG | 1 cut(s) | 327 |
| VpaK11BI | GGWCC | 1 cut(s) | 276 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 283, 403 |
| XbaI | TCTAGA | 1 cut(s) | 758 |
| XmiI | GTMKAC | 1 cut(s) | 132 |
| XmnI | GAANNNNTTC | 1 cut(s) | 702 |
| XspI | CTAG | 2 cut(s) | 728, 759 |
| Zsp2I | ATGCAT | 1 cut(s) | 749 |