Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0001947

Physical Location & Seq

Genomic Coordinates Reverse (-)

9496142 .. 9498898

Gene Structure 2757 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006664

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGGCTCCTTTCACTTTGTTTATTTCATTTCTTCTCACTAATCTTGCTGCTCTTCACTGTGCTAAAGCAGAGAGAAACCACACACGTTGTACATCATACTTGTGTAACGGTAGCAACATCTCTTTCCCCTTCAAATATCGGAAGGATCCTCCTGAATGCGGATTGTATTCTGTTAAGTGTTCTGAAGGCTCTCCTCCGAGGATTCAATTCAAAGAGAGAGGATACTGGTATGAATTTACAAGCATCTCTAACAATAATATTTCGATCATCATCAACAAAGAGCTTCAGGACCGCTTAGAAAGAATTCAACCAATTCATTGCGATGATAAAAGCTTCGAGGAATTAAGTCTTCCCAGGCCTTCTCCAATATCTAATGTGTCCGCCCCATCCAATCTGACCCTGTTCAAATGCAGCAACATGCTGTCCGTTCCGGATCTCGAATTCTGCTGCAGCAGTGCTTCCCATACCAATTATTATAATATTTCTCCCAATTATATACCAAGACCTCCTCCACTGTGTTCAGTTGTTCAGCTCCCCCTTCCGGATTATTGGAATCTTTTGAATCAATCTCACCCTAACCTCACTGTTAACTTCACCCTTCAAGTGACAGTATCCGAAAACTGTTCTGCATGCTATGATAGAGGTGGCATATGCCGGCTGGCAGACGAGAGAGAATTTACTTGTTCTCCTCCATCAAAAGGAGAATGGCGGTTGATGCTAGGACTAGGTATCGGACTTGGAGTACCAACATTTCTTGCAGCATGCTTCTGTATCCTCTGGTGTTACAGACAAAAATGTGCTTCTTTAAACTTGGTATTATCAAGGAACATTTCAAATTCAGACCCAGAAGGGCGCAGTGTCTCCTTTGGTGTTTCAGTCTTCACCTACAAAGAACTTGAGGAAGCAACTAATCATTTTGATAGTGACAAAGAAATTGGAGATGGAGGTTTTGGAATTGTATACCATGGCAAACTTAAAGATGGCCGAGAAGTTGCAGTCAAGCGATTATACGAACACAATTACAGACGTGCAGAACAATTTATGAATGAAATTGAGATTCTTACCCATCTGCGCCACAAAAATTTAGTCACCTTGTATGGATGTACTTCACGCCACAGCCGCGATCTCCTTCTTGTATACGAGTACATTGCCAATGGTACTGTTGATGATCATCTCCATGGAGACCGAGCTGCCACAGGCTCACTCCCCTGGCCTATTCGCATGAGCATTGCCAAAGAAACTGCAAGCGCATTGTGTTACCTACATGCTTCTGATATAGTACACCGAGATGTGAAGACTACCAACATTCTCCTGGAAAAAAACTTTTGTGTAAAAGTTGCGGATTTTGGGATTTCTCGCCTCTTCCCCCTTAATGCCACTCATGTCTCAACTGCTCCGCAGGGGACCCCTGGTTATGTTGATCCAGAGTATCACCAATGCTACCAGCTAACTCCCAAGAGTGATGTTTATAGTTTTGGGGTTGTTCTCATTGAGCTTATATCATCTTTACCAGCAGTTGATATAACAAGGCATAGGGATGAAATCAATCTGTCTAACATAGCAATAAACAAGATTCAAAATAGCTTATACTGTGAGCTGGTGGATTCACGTCTTGGTTTTGAGTCAGATCCTGAAGTTAAAAGGATGACAATTGCAGTAGCAGACTTGGCTTTTCAATGTCTTCGGCAGGATAGGGATGCAAGGCCTAACATGTGGGAGGTTTTGGAGGCTTTGGAGAAGACCGAAAGCAGGAGCGATGTACCAAAGAATCTAAACACAGCATTCTGTGATGCAGGGATGGGAGAGAGTATCCAGCCATCTCCTTCACCAGATTGTGACCGGATTGGGTTGTTGAAGAGCACGAAGGCACAATCTTCACCAAATTCCGTGATGGAAAAATGGTCTAGCACTAGGTCTACTACACCTAATGCCAGTGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

647

Amino Acids

72.49

Weight (kDa)

6.24

Isoelectric Point (pI)

44.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	30 - 91	2.2e-06	Wall-associated receptor kinase galacturonan-binding
Pkinase	PF00069	307 - 576	3.4e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	309 - 578	2.5e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001947)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25390 AT1G25390
fragaria_vesca	FvH4_4g26830 FvH4_4g26840 FvH4_4g26841 FvH4_4g26841
malus_domestica	MD13G1036100.v1.1 MD16G1037800.v1.1 MD16G1038800.v1.1
prunus_persica	Prupe.1G315200_v2.0.a1 Prupe.1G315900_v2.0.a1 Prupe.1G315900_v2.0.a1 Prupe.1G315900_v2.0.a1
pyrus_communis	pycom13g03150
rosa_chinensis	RchiOBHm_Chr4g0434491 RchiOBHm_Chr4g0434531 RchiOBHm_Chr4g0434541 RchiOBHm_Chr4g0434651
rosa_laevigata	RLG00000006663 RLG00000006664 RLG00000006665
rosa_multiflora	Rmu_co8505535.1_g000001 Rmu_sc0005783.1_g000005 Rmu_sc0005783.1_g000006 Rmu_sc0005783.1_g000008 Rmu_sc0005899.1_g000015 Rmu_sc0008439.1_g000007
rosa_roxburghii	Rroxscaffold_5G00375850
rosa_rugosa	Rorug04G0277200 Rorug04G0277200 Rorug04G0277200
rosa_samantha	Rh4AG333000 Rh4AG333900 Rh4BG340700 Rh4BG340800 Rh4BG341100 Rh4BG341600 Rh4BG341900 Rh4BG342100 Rh4BG342300 Rh4DG336000
rosa_wichuraiana	Rw4G028860 Rw4G028870 Rw4G028880 Rw4G028890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	477
AccI	GTMKAC	3 cut(s)	960, 1137, 1916
AccII	CGCG	1 cut(s)	1122
AccIII	TCCGGA	2 cut(s)	430, 541
AciI	CCGC	7 cut(s)	159, 292, 381, 709, 1120, 1340, 1397
AclWI	GGATC	5 cut(s)	140, 153, 441, 1415, 1622
AcoI	YGGCCR	1 cut(s)	982
AcsI	RAATTY	7 cut(s)	233, 303, 440, 674, 835, 1081, 1882
AcuI	CTGAAG	3 cut(s)	204, 269, 1653
AfaI	GTAC	7 cut(s)	91, 744, 1105, 1145, 1159, 1281, 1761
AfiI	CCNNNNNNNGG	4 cut(s)	158, 541, 698, 1749
AflIII	ACRYGT	2 cut(s)	83, 1710
AjiI	CACGTC	2 cut(s)	1028, 1610
AjnI	CCWGG	4 cut(s)	353, 1208, 1311, 1408
AluBI	AGCT	8 cut(s)	283, 333, 532, 1190, 1447, 1495, 1584, 1597
AluI	AGCT	8 cut(s)	283, 333, 532, 1190, 1447, 1495, 1584, 1597
Alw21I	GWGCWC	1 cut(s)	1862
Alw26I	GTCTC	3 cut(s)	865, 1176, 1390
AlwI	GGATC	5 cut(s)	140, 153, 441, 1415, 1622
AlwNI	CAGNNNCTG	2 cut(s)	1631, 1938
Aor13HI	TCCGGA	2 cut(s)	430, 541
AoxI	GGCC	4 cut(s)	356, 982, 1211, 1703
ApeKI	GCWGC	6 cut(s)	47, 411, 447, 450, 758, 1190
ApoI	RAATTY	7 cut(s)	233, 303, 440, 674, 835, 1081, 1882
ArsI	GACNNNNNNTTYG	2 cut(s)	1071, 1103
Asp700I	GAANNNNTTC	1 cut(s)	303
AspLEI	GCGC	3 cut(s)	855, 1074, 1250
AspS9I	GGNCC	2 cut(s)	289, 1404
AsuHPI	GGTGA	7 cut(s)	563, 586, 874, 1081, 1424, 1818, 1869
AvaII	GGWCC	2 cut(s)	289, 1404
BamHI	GGATCC	1 cut(s)	145
BbsI	GAAGAC	5 cut(s)	341, 871, 1301, 1673, 1745
Bbv12I	GWGCWC	1 cut(s)	1862
BbvI	GCAGC	6 cut(s)	34, 423, 434, 462, 770, 1177
BccI	CCATC	8 cut(s)	394, 700, 935, 974, 1074, 1792, 1825, 1885
BcgI	CGANNNNNNTGC	2 cut(s)	1130, 1164
BciT130I	CCWGG	4 cut(s)	355, 1210, 1313, 1410
BciVI	GTATCC	4 cut(s)	215, 622, 782, 1820
BclI	TGATCA	1 cut(s)	1168
BcoDI	GTCTC	3 cut(s)	865, 1176, 1390
BfaI	CTAG	4 cut(s)	719, 725, 1905, 1911
BfmI	CTRYAG	1 cut(s)	448
BfuI	GTATCC	4 cut(s)	215, 622, 782, 1820
BisI	GCNGC	7 cut(s)	48, 412, 448, 451, 759, 1120, 1191
BlsI	GCNGC	7 cut(s)	49, 413, 449, 452, 760, 1121, 1192
Bme1390I	CCNGG	4 cut(s)	355, 1210, 1313, 1410
Bme18I	GGWCC	2 cut(s)	289, 1404
BmgBI	CACGTC	2 cut(s)	1028, 1610
BmgT120I	GGNCC	2 cut(s)	289, 1404
BmiI	GGNNCC	4 cut(s)	6, 147, 1405, 1406
BmrFI	CCNGG	4 cut(s)	355, 1210, 1313, 1410
BmsI	GCATC	4 cut(s)	252, 705, 1687, 1780
BpiI	GAAGAC	5 cut(s)	341, 871, 1301, 1673, 1745
BpuEI	CTTGAG	1 cut(s)	917
BsaBI	GATNNNNATC	2 cut(s)	269, 1170
BsaI	GGTCTC	1 cut(s)	1176
BsaJI	CCNNGG	6 cut(s)	197, 353, 964, 1177, 1208, 1408
BsaWI	WCCGGW	3 cut(s)	430, 541, 1839
BsaXI	ACNNNNNCTCC	2 cut(s)	670, 700
Bsc4I	CCNNNNNNNGG	4 cut(s)	158, 541, 698, 1749
Bse118I	RCCGGY	1 cut(s)	654
Bse1I	ACTGG	2 cut(s)	230, 1932
Bse3DI	GCAATG	3 cut(s)	316, 1146, 1227
Bse8I	GATNNNNATC	2 cut(s)	269, 1170
BseAI	TCCGGA	2 cut(s)	430, 541
BseBI	CCWGG	4 cut(s)	355, 1210, 1313, 1410
BseDI	CCNNGG	6 cut(s)	197, 353, 964, 1177, 1208, 1408
BseGI	GGATG	6 cut(s)	386, 1106, 1543, 1650, 1702, 1803
BseJI	GATNNNNATC	2 cut(s)	269, 1170
BseLI	CCNNNNNNNGG	4 cut(s)	158, 541, 698, 1749
BseMI	GCAATG	3 cut(s)	316, 1146, 1227
BseNI	ACTGG	2 cut(s)	230, 1932
BseRI	GAGGAG	3 cut(s)	183, 498, 678
BseXI	GCAGC	6 cut(s)	34, 423, 434, 462, 770, 1177
BsgI	GTGCAG	1 cut(s)	1050
Bsh1236I	CGCG	1 cut(s)	1122
BshFI	GGCC	4 cut(s)	358, 984, 1213, 1705
BsiHKAI	GWGCWC	1 cut(s)	1862
BsiSI	CCGG	4 cut(s)	431, 542, 655, 1840
BslFI	GGGAC	1 cut(s)	1417
BslI	CCNNNNNNNGG	4 cut(s)	158, 541, 698, 1749
BsmAI	GTCTC	3 cut(s)	865, 1176, 1390
BsmFI	GGGAC	1 cut(s)	1417
BsmI	GAATGC	2 cut(s)	161, 1781
BsnI	GGCC	4 cut(s)	358, 984, 1213, 1705
Bso31I	GGTCTC	1 cut(s)	1176
Bsp1286I	GDGCHC	1 cut(s)	1862
Bsp13I	TCCGGA	2 cut(s)	430, 541
Bsp1407I	TGTACA	1 cut(s)	89
Bsp143I	GATC	7 cut(s)	145, 264, 433, 1123, 1168, 1420, 1627
Bsp19I	CCATGG	2 cut(s)	964, 1177
BspACI	CCGC	7 cut(s)	159, 292, 381, 709, 1120, 1340, 1397
BspANI	GGCC	4 cut(s)	358, 984, 1213, 1705
BspEI	TCCGGA	2 cut(s)	430, 541
BspFNI	CGCG	1 cut(s)	1122
BspLI	GGNNCC	4 cut(s)	6, 147, 1405, 1406
BspMAI	CTGCAG	1 cut(s)	452
BspPI	GGATC	5 cut(s)	140, 153, 441, 1415, 1622
BspQI	GCTCTTC	2 cut(s)	57, 1850
BspTNI	GGTCTC	1 cut(s)	1176
BsrDI	GCAATG	3 cut(s)	316, 1146, 1227
BsrFI	RCCGGY	1 cut(s)	654
BsrGI	TGTACA	1 cut(s)	89
BsrI	ACTGG	2 cut(s)	230, 1932
BssAI	RCCGGY	1 cut(s)	654
BssECI	CCNNGG	6 cut(s)	197, 353, 964, 1177, 1208, 1408
BssMI	GATC	7 cut(s)	145, 264, 433, 1123, 1168, 1420, 1627
BssNAI	GTATAC	2 cut(s)	961, 1138
BssT1I	CCWWGG	2 cut(s)	964, 1177
Bst1107I	GTATAC	2 cut(s)	961, 1138
Bst2UI	CCWGG	4 cut(s)	355, 1210, 1313, 1410
Bst4CI	ACNGT	8 cut(s)	59, 110, 516, 586, 610, 623, 1162, 1592
Bst6I	CTCTTC	3 cut(s)	57, 1367, 1850
BstAUI	TGTACA	1 cut(s)	89
BstC8I	GCNNGC	5 cut(s)	631, 656, 660, 763, 1246
BstDEI	CTNAG	1 cut(s)	295
BstDSI	CCRYGG	2 cut(s)	964, 1177
BstF5I	GGATG	6 cut(s)	386, 1106, 1543, 1650, 1702, 1803
BstFNI	CGCG	1 cut(s)	1122
BstHHI	GCGC	3 cut(s)	855, 1074, 1250
BstKTI	GATC	7 cut(s)	148, 267, 436, 1126, 1171, 1423, 1630
BstMAI	GTCTC	3 cut(s)	865, 1176, 1390
BstMBI	GATC	7 cut(s)	145, 264, 433, 1123, 1168, 1420, 1627
BstMWI	GCNNNNNNNGC	3 cut(s)	715, 1119, 1667
BstNI	CCWGG	4 cut(s)	355, 1210, 1313, 1410
BstNSI	RCATGY	5 cut(s)	421, 633, 765, 1268, 1714
BstSCI	CCNGG	4 cut(s)	353, 1208, 1311, 1408
BstSFI	CTRYAG	1 cut(s)	448
BstUI	CGCG	1 cut(s)	1122
BstV1I	GCAGC	6 cut(s)	34, 423, 434, 462, 770, 1177
BstV2I	GAAGAC	5 cut(s)	341, 871, 1301, 1673, 1745
BstX2I	RGATCY	3 cut(s)	145, 433, 1627
BstYI	RGATCY	3 cut(s)	145, 433, 1627
BstZ17I	GTATAC	2 cut(s)	961, 1138
BsuI	GTATCC	4 cut(s)	215, 622, 782, 1820
BsuRI	GGCC	4 cut(s)	358, 984, 1213, 1705
BtgI	CCRYGG	2 cut(s)	964, 1177
BtgZI	GCGATG	2 cut(s)	336, 1770
BtrI	CACGTC	2 cut(s)	1028, 1610
BtsCI	GGATG	6 cut(s)	386, 1106, 1543, 1650, 1702, 1803
BtsI	GCAGTG	2 cut(s)	460, 862
BtsIMutI	CAGTG	6 cut(s)	55, 460, 512, 582, 862, 1939
Cac8I	GCNNGC	5 cut(s)	631, 656, 660, 763, 1246
CaiI	CAGNNNCTG	2 cut(s)	1631, 1938
CfoI	GCGC	3 cut(s)	855, 1074, 1250
Cfr10I	RCCGGY	1 cut(s)	654
Cfr13I	GGNCC	2 cut(s)	289, 1404
Csp6I	GTAC	7 cut(s)	90, 743, 1104, 1144, 1158, 1280, 1760
CspCI	CAANNNNNGTGG	2 cut(s)	68, 103
CviAII	CATG	9 cut(s)	418, 630, 762, 965, 1178, 1222, 1265, 1382, 1711
CviQI	GTAC	7 cut(s)	90, 743, 1104, 1144, 1158, 1280, 1760
DdeI	CTNAG	1 cut(s)	295
DpnI	GATC	7 cut(s)	147, 266, 435, 1125, 1170, 1422, 1629
DpnII	GATC	7 cut(s)	145, 264, 433, 1123, 1168, 1420, 1627
DraI	TTTAAA	1 cut(s)	807
EaeI	YGGCCR	1 cut(s)	982
Eam1104I	CTCTTC	3 cut(s)	57, 1367, 1850
EarI	CTCTTC	3 cut(s)	57, 1367, 1850
EciI	GGCGGA	1 cut(s)	370
Eco130I	CCWWGG	2 cut(s)	964, 1177
Eco147I	AGGCCT	2 cut(s)	358, 1705
Eco31I	GGTCTC	1 cut(s)	1176
Eco47I	GGWCC	2 cut(s)	289, 1404
Eco57I	CTGAAG	3 cut(s)	204, 269, 1653
EcoO109I	RGGNCCY	1 cut(s)	1404
EcoRI	GAATTC	2 cut(s)	303, 440
EcoRII	CCWGG	4 cut(s)	353, 1208, 1311, 1408
EcoT14I	CCWWGG	2 cut(s)	964, 1177
ErhI	CCWWGG	2 cut(s)	964, 1177
FaeI	CATG	9 cut(s)	421, 633, 765, 968, 1181, 1225, 1268, 1385, 1714
FaqI	GGGAC	1 cut(s)	1417
FatI	CATG	9 cut(s)	417, 629, 761, 964, 1177, 1221, 1264, 1381, 1710
FauNDI	CATATG	1 cut(s)	650
FbaI	TGATCA	1 cut(s)	1168
FblI	GTMKAC	3 cut(s)	960, 1137, 1916
Fnu4HI	GCNGC	7 cut(s)	48, 412, 448, 451, 759, 1120, 1191
FokI	GGATG	6 cut(s)	373, 1113, 1550, 1657, 1709, 1810
Fsp4HI	GCNGC	7 cut(s)	48, 412, 448, 451, 759, 1120, 1191
FspBI	CTAG	4 cut(s)	719, 725, 1905, 1911
GlaI	GCGC	3 cut(s)	854, 1073, 1249
GluI	GCNGC	7 cut(s)	48, 412, 448, 451, 759, 1120, 1191
HaeIII	GGCC	4 cut(s)	358, 984, 1213, 1705
HapII	CCGG	4 cut(s)	431, 542, 655, 1840
HhaI	GCGC	3 cut(s)	855, 1074, 1250
Hin1II	CATG	9 cut(s)	421, 633, 765, 968, 1181, 1225, 1268, 1385, 1714
Hin6I	GCGC	3 cut(s)	853, 1072, 1248
HinP1I	GCGC	3 cut(s)	853, 1072, 1248
HincII	GTYRAC	1 cut(s)	589
HindII	GTYRAC	1 cut(s)	589
HindIII	AAGCTT	1 cut(s)	331
HinfI	GANTC	8 cut(s)	202, 553, 562, 1057, 1573, 1604, 1622, 1768
HpaI	GTTAAC	1 cut(s)	589
HpaII	CCGG	4 cut(s)	431, 542, 655, 1840
HphI	GGTGA	7 cut(s)	563, 586, 874, 1081, 1424, 1818, 1869
Hpy166II	GTNNAC	5 cut(s)	589, 961, 1138, 1282, 1917
Hpy188I	TCNGA	9 cut(s)	141, 184, 198, 396, 616, 734, 841, 1273, 1627
Hpy188III	TCNNGA	7 cut(s)	152, 287, 431, 437, 542, 1424, 1631
Hpy8I	GTNNAC	5 cut(s)	589, 961, 1138, 1282, 1917
HpyCH4III	ACNGT	8 cut(s)	59, 110, 516, 586, 610, 623, 1162, 1592
HpyCH4IV	ACGT	3 cut(s)	85, 1027, 1609
HpyF10VI	GCNNNNNNNGC	3 cut(s)	715, 1119, 1667
HpyF3I	CTNAG	1 cut(s)	295
HpySE526I	ACGT	3 cut(s)	85, 1027, 1609
Hsp92II	CATG	9 cut(s)	421, 633, 765, 968, 1181, 1225, 1268, 1385, 1714
HspAI	GCGC	3 cut(s)	853, 1072, 1248
KflI	GGGWCCC	1 cut(s)	1404
Kpn2I	TCCGGA	2 cut(s)	430, 541
KroI	GCCGGC	1 cut(s)	654
KroNI	GCCGGC	1 cut(s)	656
Ksp22I	TGATCA	1 cut(s)	1168
KspAI	GTTAAC	1 cut(s)	589
Kzo9I	GATC	7 cut(s)	145, 264, 433, 1123, 1168, 1420, 1627
LguI	GCTCTTC	2 cut(s)	57, 1850
LmnI	GCTCC	4 cut(s)	10, 537, 1399, 1752
Lsp1109I	GCAGC	6 cut(s)	34, 423, 434, 462, 770, 1177
LweI	GCATC	4 cut(s)	252, 705, 1687, 1780
MaeI	CTAG	4 cut(s)	719, 725, 1905, 1911
MaeII	ACGT	3 cut(s)	85, 1027, 1609
MaeIII	GTNAC	7 cut(s)	104, 604, 782, 923, 1087, 1256, 1835
MalI	GATC	7 cut(s)	147, 266, 435, 1125, 1170, 1422, 1629
MboI	GATC	7 cut(s)	145, 264, 433, 1123, 1168, 1420, 1627
MfeI	CAATTG	1 cut(s)	1650
MflI	RGATCY	3 cut(s)	145, 433, 1627
MhlI	GDGCHC	1 cut(s)	1862
MlyI	GAGTC	1 cut(s)	1631
MroI	TCCGGA	2 cut(s)	430, 541
MroNI	GCCGGC	1 cut(s)	654
MroXI	GAANNNNTTC	1 cut(s)	303
MseI	TTAA	7 cut(s)	174, 344, 588, 806, 975, 1371, 1638
MslI	CAYNNNNRTG	5 cut(s)	100, 321, 1176, 1287, 1536
MspI	CCGG	4 cut(s)	431, 542, 655, 1840
MspR9I	CCNGG	4 cut(s)	355, 1210, 1313, 1410
MunI	CAATTG	1 cut(s)	1650
Mva1269I	GAATGC	2 cut(s)	161, 1781
MvaI	CCWGG	4 cut(s)	355, 1210, 1313, 1410
MvnI	CGCG	1 cut(s)	1122
MwoI	GCNNNNNNNGC	3 cut(s)	715, 1119, 1667
NaeI	GCCGGC	1 cut(s)	656
NcoI	CCATGG	2 cut(s)	964, 1177
NdeI	CATATG	1 cut(s)	650
NdeII	GATC	7 cut(s)	145, 264, 433, 1123, 1168, 1420, 1627
NgoMIV	GCCGGC	1 cut(s)	654
NlaIII	CATG	9 cut(s)	421, 633, 765, 968, 1181, 1225, 1268, 1385, 1714
NlaIV	GGNNCC	4 cut(s)	6, 147, 1405, 1406
NmeAIII	GCCGAG	1 cut(s)	1010
NmuCI	GTSAC	4 cut(s)	604, 923, 1087, 1835
NspI	RCATGY	5 cut(s)	421, 633, 765, 1268, 1714
PaeI	GCATGC	2 cut(s)	633, 765
PceI	AGGCCT	2 cut(s)	358, 1705
PciI	ACATGT	1 cut(s)	1710
PciSI	GCTCTTC	2 cut(s)	57, 1850
PctI	GAATGC	2 cut(s)	161, 1781
PdiI	GCCGGC	1 cut(s)	656
PdmI	GAANNNNTTC	1 cut(s)	303
PfeI	GAWTC	7 cut(s)	202, 553, 562, 1057, 1573, 1604, 1768
PfoI	TCCNGGA	1 cut(s)	1311
PkrI	GCNGC	7 cut(s)	49, 413, 449, 452, 760, 1121, 1192
PleI	GAGTC	1 cut(s)	1630
PpsI	GAGTC	1 cut(s)	1630
PpuMI	RGGWCCY	1 cut(s)	1404
PscI	ACATGT	1 cut(s)	1710
PsiI	TTATAA	1 cut(s)	477
Psp5II	RGGWCCY	1 cut(s)	1404
Psp6I	CCWGG	4 cut(s)	353, 1208, 1311, 1408
PspGI	CCWGG	4 cut(s)	353, 1208, 1311, 1408
PspN4I	GGNNCC	4 cut(s)	6, 147, 1405, 1406
PspPI	GGNCC	2 cut(s)	289, 1404
PspPPI	RGGWCCY	1 cut(s)	1404
PstI	CTGCAG	1 cut(s)	452
PstNI	CAGNNNCTG	2 cut(s)	1631, 1938
PsuI	RGATCY	3 cut(s)	145, 433, 1627
RsaI	GTAC	7 cut(s)	91, 744, 1105, 1145, 1159, 1281, 1761
RsaNI	GTAC	7 cut(s)	90, 743, 1104, 1144, 1158, 1280, 1760
RseI	CAYNNNNRTG	5 cut(s)	100, 321, 1176, 1287, 1536
SapI	GCTCTTC	2 cut(s)	57, 1850
SaqAI	TTAA	7 cut(s)	174, 344, 588, 806, 975, 1371, 1638
SatI	GCNGC	7 cut(s)	48, 412, 448, 451, 759, 1120, 1191
Sau3AI	GATC	7 cut(s)	145, 264, 433, 1123, 1168, 1420, 1627
Sau96I	GGNCC	2 cut(s)	289, 1404
SchI	GAGTC	1 cut(s)	1631
ScrFI	CCNGG	4 cut(s)	355, 1210, 1313, 1410
SduI	GDGCHC	1 cut(s)	1862
SfaNI	GCATC	4 cut(s)	252, 705, 1687, 1780
SfcI	CTRYAG	1 cut(s)	448
SinI	GGWCC	2 cut(s)	289, 1404
SmiMI	CAYNNNNRTG	5 cut(s)	100, 321, 1176, 1287, 1536
SmlI	CTYRAG	1 cut(s)	896
SmoI	CTYRAG	1 cut(s)	896
SphI	GCATGC	2 cut(s)	633, 765
SseBI	AGGCCT	2 cut(s)	358, 1705
SsiI	CCGC	7 cut(s)	159, 292, 381, 709, 1120, 1340, 1397
SspI	AATATT	2 cut(s)	259, 481
SspMI	CTAG	4 cut(s)	719, 725, 1905, 1911
StuI	AGGCCT	2 cut(s)	358, 1705
StyD4I	CCNGG	4 cut(s)	353, 1208, 1311, 1408
StyI	CCWWGG	2 cut(s)	964, 1177
TaaI	ACNGT	8 cut(s)	59, 110, 516, 586, 610, 623, 1162, 1592
TaiI	ACGT	3 cut(s)	88, 1030, 1612
TaqI	TCGA	3 cut(s)	263, 336, 438
TaqII	GACCGA	2 cut(s)	1200, 1757
TatI	WGTACW	4 cut(s)	89, 1103, 1143, 1279
TauI	GCSGC	1 cut(s)	1122
TfiI	GAWTC	7 cut(s)	202, 553, 562, 1057, 1573, 1604, 1768
Tru1I	TTAA	7 cut(s)	174, 344, 588, 806, 975, 1371, 1638
Tru9I	TTAA	7 cut(s)	174, 344, 588, 806, 975, 1371, 1638
TscAI	CASTG	6 cut(s)	62, 460, 519, 589, 862, 1939
TseFI	GTSAC	4 cut(s)	604, 923, 1087, 1835
TseI	GCWGC	6 cut(s)	47, 411, 447, 450, 758, 1190
Tsp45I	GTSAC	4 cut(s)	604, 923, 1087, 1835
TspDTI	ATGAA	6 cut(s)	15, 246, 305, 1058, 1062, 1554
TspGWI	ACGGA	2 cut(s)	415, 1876
TspRI	CASTG	6 cut(s)	62, 460, 519, 589, 862, 1939
VpaK11BI	GGWCC	2 cut(s)	289, 1404
XapI	RAATTY	7 cut(s)	233, 303, 440, 674, 835, 1081, 1882
XceI	RCATGY	5 cut(s)	421, 633, 765, 1268, 1714
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1309
XmiI	GTMKAC	3 cut(s)	960, 1137, 1916
XmnI	GAANNNNTTC	1 cut(s)	303
XspI	CTAG	4 cut(s)	719, 725, 1905, 1911

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.