Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001947

Physical Location & Seq

Genomic Coordinates Reverse (-)

44978259 .. 44982471

Gene Structure 4213 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0277200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGAAGATCAACGTCAATCAAATGACTCGCCGAGTCGAGGTCGACAATCGCTACCCTCTCCGATTCTACTACCGCATCGCCGATAATCTCCTCAAACAGGCTAGTATATACCGTGAGGAGAAGAACATTATAGAGTTGTATGTCATACTTGTCCGATTTTCGAGTTTGGTGTCTGAAACTATACCGTGTCATCGAGACTATCAGGCGATTCTTCCGAAAGAGAGGAGTCTATATAAGAAGAAACTGTTGAGTGTACTGGATGAGCTCGAGTCTTTGAAGCCAGAATTCCAACGCCGTGCCAGTGAACATAATGAGGCCGCTGCAGCTTCTCAGCTTCCTGAACTTGAAAGCACTTCATATGGCTTGCAGACGTCTTCTTTAGAATGGCCTCCTGTGAACAATAAATCATTGAGCATGAATGTCAGGCAGCCTGCTAGCCTGACATCTCAGTCGTCATGGAAGTATAAAAATGATTTTTCACGGGGTACAACAAGTACTGTACAAATCGACAAGCAGTTCCAGAATCTATCTTTTAATCTACCTCTTCCAAATAAAGAGACTTTGTCTAGACACTCATTTTTGGGTCCAAATGGTCTTCAGGGTCAGTGGCGAGGACCCAGCGCAAAAGTTAAGGTTCAATATCCAAGCGGTACTGACTTAATCCCTAGTGAAAATTCAGGCCTCAATCAGGCTATACAATATGATCTTGTGGGAGTAAAAGAAGGTGATCCAGGTGGGGTGAATTCTACCATGGAATCAGTGCTCTCGTTGGACAATGGTGATTGGTTACGCACTGCTCAGGAATCATGTCCTTCATGGATTAGTGAAGCAAAGGAAGATCCTTTTCCATTGGTCAAACAACCTTCTCCTCCTCCTGTTCTTGCTCGAGTGCAGCAGGAAATGGCTCCAATTCATCCTTCAAAAGTGGCAGATCCAAGACCAGGACCTGCAAGTCCATCTCAGGATGGGATGCCAAGTTCTAATTCATATCAGCATTTACACGTTCCAATAAAAATGATGGAAGATTTCTTAAGATTGGCTCGGAAAAATACAGAAAAAAACTTAGAAACATGTGGTGTTCTTGCTGGTTCATTGAAAAACAAGGTTTTTCATATCACTACGCTAATAATCCCAAAGCAAGAGTCAACTTCTGATTCGTGTCAAACATTGAATGAGGAAGAAATATTTGAGGTTCAAGACAGACTATCTCTTTTTCCTCTTGGGTGGATTCATACACACCCATCACAGACCTGTTTCATGTCATCAGTTGATCTGCACACTCATTACTCATACCAGATTATGTTACCAGAAGCAATTGCAATTGTTATGGCTCCAACAGACACATCCAGTCCACATGGCATATTTCACTTATCTGACCCAGGTGGTGTATCCGTTATTCGTAACTGTCAACAGCGTGGATTTCATCCTCATGAGGAGCCTTCGGATGGAACCTCAATATATGAGCATTGTTCTCACGTGTATATTAATTCTAATTTGAAGATCGATGTTGTTGATCTGCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

507

Amino Acids

57.06

Weight (kDa)

6.2

Isoelectric Point (pI)

54.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
USP8_dimer	PF08969	6 - 99	2.5e-13	USP8 dimerisation domain
JAB	PF01398	329 - 437	6.3e-19	JAB1/Mov34/MPN/PAD-1 ubiquitin protease
Prok-JAB	PF14464	346 - 429	6.5e-06	Prokaryotic homologs of the JAB domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001947)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G25390 AT1G25390
fragaria_vesca	FvH4_4g26830 FvH4_4g26840 FvH4_4g26841 FvH4_4g26841
malus_domestica	MD13G1036100.v1.1 MD16G1037800.v1.1 MD16G1038800.v1.1
prunus_persica	Prupe.1G315200_v2.0.a1 Prupe.1G315900_v2.0.a1 Prupe.1G315900_v2.0.a1 Prupe.1G315900_v2.0.a1
pyrus_communis	pycom13g03150
rosa_chinensis	RchiOBHm_Chr4g0434491 RchiOBHm_Chr4g0434531 RchiOBHm_Chr4g0434541 RchiOBHm_Chr4g0434651
rosa_laevigata	RLG00000006663 RLG00000006664 RLG00000006665
rosa_multiflora	Rmu_co8505535.1_g000001 Rmu_sc0005783.1_g000005 Rmu_sc0005783.1_g000006 Rmu_sc0005783.1_g000008 Rmu_sc0005899.1_g000015 Rmu_sc0008439.1_g000007
rosa_roxburghii	Rroxscaffold_5G00375850
rosa_rugosa	Rorug04G0277200 Rorug04G0277200 Rorug04G0277200
rosa_samantha	Rh4AG333000 Rh4AG333900 Rh4BG340700 Rh4BG340800 Rh4BG341100 Rh4BG341600 Rh4BG341900 Rh4BG342100 Rh4BG342300 Rh4DG336000
rosa_wichuraiana	Rw4G028860 Rw4G028870 Rw4G028880 Rw4G028890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	448, 951
AatII	GACGTC	1 cut(s)	374
Acc36I	ACCTGC	1 cut(s)	955
AccI	GTMKAC	1 cut(s)	42
AciI	CCGC	4 cut(s)	73, 318, 648, 1519
AclWI	GGATC	3 cut(s)	722, 833, 926
AcsI	RAATTY	3 cut(s)	284, 673, 742
AcuI	CTGAAG	1 cut(s)	581
AcvI	CACGTG	1 cut(s)	1477
AcyI	GRCGYC	1 cut(s)	371
AfaI	GTAC	5 cut(s)	255, 487, 496, 501, 652
AfiI	CCNNNNNNNGG	5 cut(s)	37, 97, 688, 941, 1445
AflII	CTTAAG	1 cut(s)	1030
AflIII	ACRYGT	3 cut(s)	1000, 1070, 1476
AgsI	TTSAA	8 cut(s)	277, 347, 638, 921, 1096, 1171, 1196, 1498
AjnI	CCWGG	3 cut(s)	730, 940, 1378
AjuI	GAANNNNNNNTTGG	4 cut(s)	901, 933, 967, 999
AloI	GAACNNNNNNTCC	2 cut(s)	961, 993
AluBI	AGCT	3 cut(s)	265, 326, 334
AluI	AGCT	3 cut(s)	265, 326, 334
Alw21I	GWGCWC	2 cut(s)	267, 765
Alw26I	GTCTC	2 cut(s)	189, 551
AlwI	GGATC	3 cut(s)	722, 833, 926
AlwNI	CAGNNNCTG	1 cut(s)	947
Ama87I	CYCGRG	2 cut(s)	266, 885
AoxI	GGCC	3 cut(s)	315, 386, 679
ApeKI	GCWGC	4 cut(s)	320, 323, 427, 892
ApoI	RAATTY	3 cut(s)	284, 673, 742
ArsI	GACNNNNNNTTYG	2 cut(s)	1127, 1159
AseI	ATTAAT	1 cut(s)	1485
AspLEI	GCGC	1 cut(s)	623
AspS9I	GGNCC	3 cut(s)	584, 614, 944
AsuHPI	GGTGA	3 cut(s)	737, 751, 791
AsuNHI	GCTAGC	1 cut(s)	434
AvaI	CYCGRG	2 cut(s)	266, 885
AvaII	GGWCC	3 cut(s)	584, 614, 944
BanII	GRGCYC	1 cut(s)	267
BbrPI	CACGTG	1 cut(s)	1477
BbsI	GAAGAC	2 cut(s)	366, 587
Bbv12I	GWGCWC	2 cut(s)	267, 765
BbvI	GCAGC	4 cut(s)	307, 335, 439, 904
BccI	CCATC	5 cut(s)	959, 964, 1012, 1249, 1439
BceAI	ACGGC	1 cut(s)	279
BciT130I	CCWGG	3 cut(s)	732, 942, 1380
BciVI	GTATCC	1 cut(s)	1399
BcoDI	GTCTC	2 cut(s)	189, 551
BfaI	CTAG	4 cut(s)	102, 435, 567, 666
BfmI	CTRYAG	1 cut(s)	321
BfrI	CTTAAG	1 cut(s)	1030
BfuAI	ACCTGC	1 cut(s)	955
BfuI	GTATCC	1 cut(s)	1399
BisI	GCNGC	5 cut(s)	318, 321, 324, 428, 893
BlsI	GCNGC	5 cut(s)	319, 322, 325, 429, 894
BmcAI	AGTACT	1 cut(s)	496
Bme1390I	CCNGG	3 cut(s)	732, 942, 1380
Bme18I	GGWCC	3 cut(s)	584, 614, 944
BmeT110I	CYCGRG	2 cut(s)	266, 885
BmgT120I	GGNCC	3 cut(s)	584, 614, 944
BmiI	GGNNCC	6 cut(s)	585, 616, 906, 1332, 1437, 1450
BmrFI	CCNGG	3 cut(s)	732, 942, 1380
BmsI	GCATC	2 cut(s)	84, 960
BmtI	GCTAGC	1 cut(s)	438
BpiI	GAAGAC	2 cut(s)	366, 587
Bpu10I	CCTNAGC	1 cut(s)	798
Bsa29I	ATCGAT	1 cut(s)	1503
BsaAI	YACGTR	1 cut(s)	1477
BsaHI	GRCGYC	1 cut(s)	371
BsaJI	CCNNGG	2 cut(s)	750, 1378
Bsc4I	CCNNNNNNNGG	5 cut(s)	37, 97, 688, 941, 1445
Bse1I	ACTGG	3 cut(s)	261, 300, 1347
BseBI	CCWGG	3 cut(s)	732, 942, 1380
BseCI	ATCGAT	1 cut(s)	1503
BseDI	CCNNGG	2 cut(s)	750, 1378
BseGI	GGATG	7 cut(s)	265, 913, 970, 975, 1343, 1423, 1450
BseLI	CCNNNNNNNGG	5 cut(s)	37, 97, 688, 941, 1445
BseMII	CTCAG	4 cut(s)	344, 461, 812, 974
BseNI	ACTGG	3 cut(s)	261, 300, 1347
BseRI	GAGGAG	6 cut(s)	80, 131, 238, 858, 861, 1448
BseXI	GCAGC	4 cut(s)	307, 335, 439, 904
BseYI	CCCAGC	1 cut(s)	617
BsgI	GTGCAG	2 cut(s)	911, 1259
BshFI	GGCC	3 cut(s)	317, 388, 681
BshVI	ATCGAT	1 cut(s)	1503
BsiHKAI	GWGCWC	2 cut(s)	267, 765
BsiHKCI	CYCGRG	2 cut(s)	266, 885
BslI	CCNNNNNNNGG	5 cut(s)	37, 97, 688, 941, 1445
BsmAI	GTCTC	2 cut(s)	189, 551
BsnI	GGCC	3 cut(s)	317, 388, 681
BsoBI	CYCGRG	2 cut(s)	266, 885
Bsp1286I	GDGCHC	2 cut(s)	267, 765
Bsp1407I	TGTACA	1 cut(s)	499
Bsp143I	GATC	8 cut(s)	6, 703, 727, 838, 931, 1270, 1500, 1513
Bsp19I	CCATGG	1 cut(s)	750
BspACI	CCGC	4 cut(s)	73, 318, 648, 1519
BspANI	GGCC	3 cut(s)	317, 388, 681
BspCNI	CTCAG	4 cut(s)	343, 460, 811, 973
BspDI	ATCGAT	1 cut(s)	1503
BspHI	TCATGA	1 cut(s)	1429
BspLI	GGNNCC	6 cut(s)	585, 616, 906, 1332, 1437, 1450
BspMAI	CTGCAG	1 cut(s)	325
BspMI	ACCTGC	1 cut(s)	955
BspOI	GCTAGC	1 cut(s)	438
BspPI	GGATC	3 cut(s)	722, 833, 926
BspTI	CTTAAG	1 cut(s)	1030
BsrGI	TGTACA	1 cut(s)	499
BsrI	ACTGG	3 cut(s)	261, 300, 1347
BssECI	CCNNGG	2 cut(s)	750, 1378
BssMI	GATC	8 cut(s)	6, 703, 727, 838, 931, 1270, 1500, 1513
BssNI	GRCGYC	1 cut(s)	371
BssT1I	CCWWGG	1 cut(s)	750
Bst2UI	CCWGG	3 cut(s)	732, 942, 1380
Bst4CI	ACNGT	5 cut(s)	113, 186, 246, 499, 1406
Bst6I	CTCTTC	1 cut(s)	549
BstACI	GRCGYC	1 cut(s)	371
BstAFI	CTTAAG	1 cut(s)	1030
BstAUI	TGTACA	1 cut(s)	499
BstBAI	YACGTR	1 cut(s)	1477
BstC8I	GCNNGC	3 cut(s)	365, 432, 436
BstDEI	CTNAG	5 cut(s)	330, 447, 798, 960, 1063
BstDSI	CCRYGG	1 cut(s)	750
BstENI	CCTNNNNNAGG	2 cut(s)	95, 686
BstF5I	GGATG	7 cut(s)	265, 913, 970, 975, 1343, 1423, 1450
BstHHI	GCGC	1 cut(s)	623
BstKTI	GATC	8 cut(s)	9, 706, 730, 841, 934, 1273, 1503, 1516
BstMAI	GTCTC	2 cut(s)	189, 551
BstMBI	GATC	8 cut(s)	6, 703, 727, 838, 931, 1270, 1500, 1513
BstMWI	GCNNNNNNNGC	1 cut(s)	323
BstNI	CCWGG	3 cut(s)	732, 942, 1380
BstNSI	RCATGY	1 cut(s)	1074
BstSCI	CCNGG	3 cut(s)	730, 940, 1378
BstSFI	CTRYAG	1 cut(s)	321
BstV1I	GCAGC	4 cut(s)	307, 335, 439, 904
BstV2I	GAAGAC	2 cut(s)	366, 587
BstX2I	RGATCY	2 cut(s)	838, 931
BstYI	RGATCY	2 cut(s)	838, 931
Bsu15I	ATCGAT	1 cut(s)	1503
BsuI	GTATCC	1 cut(s)	1399
BsuRI	GGCC	3 cut(s)	317, 388, 681
BsuTUI	ATCGAT	1 cut(s)	1503
BtgI	CCRYGG	1 cut(s)	750
BtgZI	GCGATG	1 cut(s)	61
BtsCI	GGATG	7 cut(s)	265, 913, 970, 975, 1343, 1423, 1450
BtsI	GCAGTG	1 cut(s)	792
BtsIMutI	CAGTG	4 cut(s)	307, 611, 765, 792
BveI	ACCTGC	1 cut(s)	955
Cac8I	GCNNGC	3 cut(s)	365, 432, 436
CaiI	CAGNNNCTG	1 cut(s)	947
CciI	TCATGA	1 cut(s)	1429
CfoI	GCGC	1 cut(s)	623
Cfr13I	GGNCC	3 cut(s)	584, 614, 944
ClaI	ATCGAT	1 cut(s)	1503
Csp6I	GTAC	5 cut(s)	254, 486, 495, 500, 651
CviAII	CATG	9 cut(s)	415, 456, 751, 807, 816, 1071, 1258, 1355, 1430
CviQI	GTAC	5 cut(s)	254, 486, 495, 500, 651
DdeI	CTNAG	5 cut(s)	330, 447, 798, 960, 1063
DpnI	GATC	8 cut(s)	8, 705, 729, 840, 933, 1272, 1502, 1515
DpnII	GATC	8 cut(s)	6, 703, 727, 838, 931, 1270, 1500, 1513
DrdI	GACNNNNNNGTC	2 cut(s)	448, 951
DseDI	GACNNNNNNGTC	2 cut(s)	448, 951
Eam1104I	CTCTTC	1 cut(s)	549
EarI	CTCTTC	1 cut(s)	549
Ecl136II	GAGCTC	1 cut(s)	265
Eco130I	CCWWGG	1 cut(s)	750
Eco147I	AGGCCT	1 cut(s)	681
Eco24I	GRGCYC	1 cut(s)	267
Eco47I	GGWCC	3 cut(s)	584, 614, 944
Eco53kI	GAGCTC	1 cut(s)	265
Eco57I	CTGAAG	1 cut(s)	581
Eco72I	CACGTG	1 cut(s)	1477
Eco88I	CYCGRG	2 cut(s)	266, 885
EcoICRI	GAGCTC	1 cut(s)	265
EcoNI	CCTNNNNNAGG	2 cut(s)	95, 686
EcoO109I	RGGNCCY	2 cut(s)	614, 944
EcoRI	GAATTC	2 cut(s)	284, 742
EcoRII	CCWGG	3 cut(s)	730, 940, 1378
EcoT14I	CCWWGG	1 cut(s)	750
EcoT38I	GRGCYC	1 cut(s)	267
ErhI	CCWWGG	1 cut(s)	750
FaeI	CATG	9 cut(s)	418, 459, 754, 810, 819, 1074, 1261, 1358, 1433
FatI	CATG	9 cut(s)	414, 455, 750, 806, 815, 1070, 1257, 1354, 1429
FauNDI	CATATG	1 cut(s)	358
FblI	GTMKAC	1 cut(s)	42
Fnu4HI	GCNGC	5 cut(s)	318, 321, 324, 428, 893
FokI	GGATG	7 cut(s)	272, 900, 977, 982, 1330, 1410, 1457
FriOI	GRGCYC	1 cut(s)	267
Fsp4HI	GCNGC	5 cut(s)	318, 321, 324, 428, 893
FspBI	CTAG	4 cut(s)	102, 435, 567, 666
GlaI	GCGC	1 cut(s)	622
GluI	GCNGC	5 cut(s)	318, 321, 324, 428, 893
GsaI	CCCAGC	1 cut(s)	621
HaeIII	GGCC	3 cut(s)	317, 388, 681
HhaI	GCGC	1 cut(s)	623
Hin1I	GRCGYC	1 cut(s)	371
Hin1II	CATG	9 cut(s)	418, 459, 754, 810, 819, 1074, 1261, 1358, 1433
Hin6I	GCGC	1 cut(s)	621
HinP1I	GCGC	1 cut(s)	621
HincII	GTYRAC	3 cut(s)	43, 1146, 1409
HindII	GTYRAC	3 cut(s)	43, 1146, 1409
HphI	GGTGA	3 cut(s)	737, 751, 791
Hpy166II	GTNNAC	7 cut(s)	43, 254, 305, 397, 1146, 1352, 1409
Hpy188I	TCNGA	8 cut(s)	62, 155, 175, 216, 1044, 1153, 1375, 1444
Hpy188III	TCNNGA	8 cut(s)	194, 338, 520, 567, 800, 962, 1196, 1430
Hpy8I	GTNNAC	7 cut(s)	43, 254, 305, 397, 1146, 1352, 1409
HpyAV	CCTTC	5 cut(s)	716, 822, 873, 927, 1449
HpyCH4III	ACNGT	5 cut(s)	113, 186, 246, 499, 1406
HpyCH4IV	ACGT	4 cut(s)	12, 371, 1002, 1476
HpyCH4V	TGCA	6 cut(s)	323, 367, 892, 950, 1276, 1319
HpyF10VI	GCNNNNNNNGC	1 cut(s)	323
HpyF3I	CTNAG	5 cut(s)	330, 447, 798, 960, 1063
HpySE526I	ACGT	4 cut(s)	12, 371, 1002, 1476
Hsp92I	GRCGYC	1 cut(s)	371
Hsp92II	CATG	9 cut(s)	418, 459, 754, 810, 819, 1074, 1261, 1358, 1433
HspAI	GCGC	1 cut(s)	621
Kzo9I	GATC	8 cut(s)	6, 703, 727, 838, 931, 1270, 1500, 1513
LmnI	GCTCC	3 cut(s)	910, 1336, 1435
Lsp1109I	GCAGC	4 cut(s)	307, 335, 439, 904
LweI	GCATC	2 cut(s)	84, 960
MaeI	CTAG	4 cut(s)	102, 435, 567, 666
MaeII	ACGT	4 cut(s)	12, 371, 1002, 1476
MaeIII	GTNAC	3 cut(s)	786, 1302, 1400
MalI	GATC	8 cut(s)	8, 705, 729, 840, 933, 1272, 1502, 1515
MboI	GATC	8 cut(s)	6, 703, 727, 838, 931, 1270, 1500, 1513
MfeI	CAATTG	2 cut(s)	1314, 1320
MflI	RGATCY	2 cut(s)	838, 931
MhlI	GDGCHC	2 cut(s)	267, 765
MluCI	AATT	9 cut(s)	284, 673, 742, 909, 982, 1314, 1320, 1486, 1492
MlyI	GAGTC	5 cut(s)	19, 42, 235, 278, 1151
MmeI	TCCRAC	3 cut(s)	313, 750, 1358
MseI	TTAA	5 cut(s)	534, 630, 659, 1031, 1485
MslI	CAYNNNNRTG	1 cut(s)	1428
MspA1I	CMGCKG	1 cut(s)	320
MspCI	CTTAAG	1 cut(s)	1030
MspR9I	CCNGG	3 cut(s)	732, 942, 1380
MunI	CAATTG	2 cut(s)	1314, 1320
MvaI	CCWGG	3 cut(s)	732, 942, 1380
MwoI	GCNNNNNNNGC	1 cut(s)	323
NcoI	CCATGG	1 cut(s)	750
NdeI	CATATG	1 cut(s)	358
NdeII	GATC	8 cut(s)	6, 703, 727, 838, 931, 1270, 1500, 1513
NheI	GCTAGC	1 cut(s)	434
NlaIII	CATG	9 cut(s)	418, 459, 754, 810, 819, 1074, 1261, 1358, 1433
NlaIV	GGNNCC	6 cut(s)	585, 616, 906, 1332, 1437, 1450
NmeAIII	GCCGAG	1 cut(s)	56
NspI	RCATGY	1 cut(s)	1074
PaeR7I	CTCGAG	2 cut(s)	266, 885
PagI	TCATGA	1 cut(s)	1429
PceI	AGGCCT	1 cut(s)	681
PciI	ACATGT	1 cut(s)	1070
PfeI	GAWTC	7 cut(s)	63, 208, 523, 755, 803, 1154, 1228
PflFI	GACNNNGTC	1 cut(s)	562
PkrI	GCNGC	5 cut(s)	319, 322, 325, 429, 894
PleI	GAGTC	5 cut(s)	19, 41, 234, 277, 1150
PmaCI	CACGTG	1 cut(s)	1477
PmlI	CACGTG	1 cut(s)	1477
PpsI	GAGTC	5 cut(s)	19, 41, 234, 277, 1150
Ppu21I	YACGTR	1 cut(s)	1477
PpuMI	RGGWCCY	2 cut(s)	614, 944
PscI	ACATGT	1 cut(s)	1070
PshBI	ATTAAT	1 cut(s)	1485
Psp124BI	GAGCTC	1 cut(s)	267
Psp5II	RGGWCCY	2 cut(s)	614, 944
Psp6I	CCWGG	3 cut(s)	730, 940, 1378
PspCI	CACGTG	1 cut(s)	1477
PspFI	CCCAGC	1 cut(s)	617
PspGI	CCWGG	3 cut(s)	730, 940, 1378
PspN4I	GGNNCC	6 cut(s)	585, 616, 906, 1332, 1437, 1450
PspPI	GGNCC	3 cut(s)	584, 614, 944
PspPPI	RGGWCCY	2 cut(s)	614, 944
PspXI	VCTCGAGB	2 cut(s)	266, 885
PstI	CTGCAG	1 cut(s)	325
PstNI	CAGNNNCTG	1 cut(s)	947
PsuI	RGATCY	2 cut(s)	838, 931
PsyI	GACNNNGTC	1 cut(s)	562
RsaI	GTAC	5 cut(s)	255, 487, 496, 501, 652
RsaNI	GTAC	5 cut(s)	254, 486, 495, 500, 651
RseI	CAYNNNNRTG	1 cut(s)	1428
SacI	GAGCTC	1 cut(s)	267
SalI	GTCGAC	1 cut(s)	41
SaqAI	TTAA	5 cut(s)	534, 630, 659, 1031, 1485
SatI	GCNGC	5 cut(s)	318, 321, 324, 428, 893
Sau3AI	GATC	8 cut(s)	6, 703, 727, 838, 931, 1270, 1500, 1513
Sau96I	GGNCC	3 cut(s)	584, 614, 944
ScaI	AGTACT	1 cut(s)	496
SchI	GAGTC	5 cut(s)	19, 42, 235, 278, 1151
ScrFI	CCNGG	3 cut(s)	732, 942, 1380
SduI	GDGCHC	2 cut(s)	267, 765
SfaNI	GCATC	2 cut(s)	84, 960
SfcI	CTRYAG	1 cut(s)	321
Sfr274I	CTCGAG	2 cut(s)	266, 885
SinI	GGWCC	3 cut(s)	584, 614, 944
SlaI	CTCGAG	2 cut(s)	266, 885
SmiMI	CAYNNNNRTG	1 cut(s)	1428
SmlI	CTYRAG	3 cut(s)	266, 885, 1030
SmoI	CTYRAG	3 cut(s)	266, 885, 1030
Sse9I	AATT	9 cut(s)	284, 673, 742, 909, 982, 1314, 1320, 1486, 1492
SseBI	AGGCCT	1 cut(s)	681
SsiI	CCGC	4 cut(s)	73, 318, 648, 1519
SspI	AATATT	1 cut(s)	1185
SspMI	CTAG	4 cut(s)	102, 435, 567, 666
SstI	GAGCTC	1 cut(s)	267
StuI	AGGCCT	1 cut(s)	681
StyD4I	CCNGG	3 cut(s)	730, 940, 1378
StyI	CCWWGG	1 cut(s)	750
TaaI	ACNGT	5 cut(s)	113, 186, 246, 499, 1406
TaiI	ACGT	4 cut(s)	15, 374, 1005, 1479
TaqI	TCGA	8 cut(s)	36, 42, 161, 193, 267, 507, 886, 1503
TasI	AATT	9 cut(s)	284, 673, 742, 909, 982, 1314, 1320, 1486, 1492
TatI	WGTACW	3 cut(s)	253, 494, 499
TauI	GCSGC	1 cut(s)	320
TfiI	GAWTC	7 cut(s)	63, 208, 523, 755, 803, 1154, 1228
Tru1I	TTAA	5 cut(s)	534, 630, 659, 1031, 1485
Tru9I	TTAA	5 cut(s)	534, 630, 659, 1031, 1485
TscAI	CASTG	4 cut(s)	307, 611, 765, 799
TseI	GCWGC	4 cut(s)	320, 323, 427, 892
TspGWI	ACGGA	1 cut(s)	1381
TspRI	CASTG	4 cut(s)	307, 611, 765, 799
Tth111I	GACNNNGTC	1 cut(s)	562
Vha464I	CTTAAG	1 cut(s)	1030
VpaK11BI	GGWCC	3 cut(s)	584, 614, 944
VspI	ATTAAT	1 cut(s)	1485
XagI	CCTNNNNNAGG	2 cut(s)	95, 686
XapI	RAATTY	3 cut(s)	284, 673, 742
XbaI	TCTAGA	1 cut(s)	566
XceI	RCATGY	1 cut(s)	1074
XhoI	CTCGAG	2 cut(s)	266, 885
XmiI	GTMKAC	1 cut(s)	42
XspI	CTAG	4 cut(s)	102, 435, 567, 666
ZraI	GACGTC	1 cut(s)	372
ZrmI	AGTACT	1 cut(s)	496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.