Rmu_sc0005899.1_g000015

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005899.1
Physical Location & Seq
Forward (+)
53829 .. 56637
2809 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005899.1_g000015.1.cds

Sequence Viewer

Length: 2043 bp
atggctaccgtggctgtgtttattttctctgtcttcactcatcttctgcttctttactccgctgagagttgtccctccttctgtaataatacgaaagtgggtcctatcgtcttcccctttaaaaacataacagcgagtcgtcctgaatgcggattgttcactgtcaactgttctgaccgccttaatccgaagatccaactcaaagatggaggatactggtttcaactggaaagcatgaatcgatccgattccgttgattccgttgttatcaatgacagccatcttcaggagcgcatagagcacttaaaaggagatacctgtgatgatggtgtttttaatgatttatgtcttccaggcccttctcccttcttccgtacatccacaaacaaccttacactgttcaaatgcaacaacagcacccaggagaaaactctttccaaggatcttcaccatgcttgcaggagtgtaaatcatatttactatactgtatcaagttatagtttagagtgcccaaccattcagatccccatacatccaaattctccttccaatgtctataatcgttcagcattgactgctagattcgaccttcaactacaacttaccgcagaatgttggcagtgcgatgatactggaggtaaatgcgtggatgacaatggaccattcaaatgtgcccacccccaatgctgggatgagaagggacaattcaattgttccctcgcagaagaaggtaaatgccacgatgagaaggaggaacgcaaatgtgccaaagcaggaaatcatcatttgggtttgaagctaggactcggtattggacttggaggtgcagcactacttggactccttgcagcatgcttgtttcttttcaggcgttacaaaaaaaagctggcttcttcaaacgtagtctccaggaacatttcttctcagccctactcaaaatcagacctagaagggggcaatgcctactttggtgtttcagtcttcacctacgaggaacttgaagaagccactaatcattttgacagtgaaaaagagcttggagatggaggttttggaactgtctactatggcaaactcaaagatggccgggaagttgcagtcaagcgtttgtacgagcacaattacaaacgtgtggaacagtttatgaatgaaattgaaattctcacccgtctgcgccacaaaaacttagtctccctctatggttgcacttcacgccgcagccgtgaactcatccttgtctatgaatacattcccaatggcactgttgctgatcatctccacggcgacctagcagaacatggtttactcacatggcctattcgtatgagcattgccatagaaactgccaatgcactgtcttacctccatgtttctgatattgtgcatcgtgatgtgaagactaccaacattctccttgacaacaatttctgtgttaaagttgcagatttcgggctctcgcggctttttccccttgatgtcactcatgtctctactgcgccacaagggacccctggttatgttgacccagagtatcaccagtgttaccagctaactagtaagagtgatgtttatagttttggagttgtcctcattgagctgatatcatctctgccagcagttgatataactaggcataggcatgagatcaatttgtctaacatagccataaacaagattcaaagaggtttatacagtgagctggttgattcatgtcttgggtttgagtcggatcatgaagttaaaaggatgacaattgcagtggcagagttggcattccaatgtttgcagcaggacaatgatgcgaggcctaccatgtctgaggttttggaaaccttgcagacgattgaaagtggaaaagatgttccagagaatttgaaggagaactttggtgatgttgagatgagaaagagtatacagccaccatcttcaccagaatgtgatgagcttcagttgttgaagaacatgaggccaccattttcaccgatttccgtgacccaaaattggcctagcactaggtctattacacctaatgccagttgctga

Protein Analysis

680

Amino Acids

76.15

Weight (kDa)

5.8

Isoelectric Point (pI)

50.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 1062, 1912
AccII CGCG 1 cut(s) 1459
AciI CCGC 6 cut(s) 60, 150, 178, 606, 1216, 1459
AclWI GGATC 5 cut(s) 187, 237, 450, 517, 1737
AcoI YGGCCR 1 cut(s) 1084
AcsI RAATTY 3 cut(s) 538, 1158, 1870
AcuI CTGAAG 2 cut(s) 269, 1931
AfaI GTAC 2 cut(s) 376, 1112
AfiI CCNNNNNNNGG 6 cut(s) 149, 286, 687, 688, 952, 2001
AflIII ACRYGT 1 cut(s) 1129
AhlI ACTAGT 1 cut(s) 1553
AjnI CCWGG 4 cut(s) 352, 420, 908, 1510
AjuI GAANNNNNNNTTGG 4 cut(s) 529, 561, 1020, 1052
AloI GAACNNNNNNTCC 2 cut(s) 1845, 1877
AluBI AGCT 7 cut(s) 799, 886, 1036, 1549, 1597, 1699, 1945
AluI AGCT 7 cut(s) 799, 886, 1036, 1549, 1597, 1699, 1945
Alw21I GWGCWC 2 cut(s) 303, 1119
Alw26I GTCTC 3 cut(s) 910, 1195, 1492
AlwI GGATC 5 cut(s) 187, 237, 450, 517, 1737
AlwNI CAGNNNCTG 1 cut(s) 2040
AoxI GGCC 6 cut(s) 355, 1084, 1313, 1805, 1967, 2003
ApeKI GCWGC 4 cut(s) 827, 848, 1218, 1786
ApoI RAATTY 3 cut(s) 538, 1158, 1870
ArsI GACNNNNNNTTYG 2 cut(s) 1173, 1205
Asp700I GAANNNNTTC 1 cut(s) 1248
AspLEI GCGC 3 cut(s) 294, 1176, 1498
AspS9I GGNCC 4 cut(s) 101, 356, 659, 1506
AsuC2I CCSGG 1 cut(s) 1088
AsuHPI GGTGA 7 cut(s) 440, 976, 1156, 1526, 1901, 1920, 1971
AvaII GGWCC 3 cut(s) 101, 659, 1506
BaeGI GKGCMC 2 cut(s) 512, 676
BanII GRGCYC 1 cut(s) 1455
BbsI GAAGAC 5 cut(s) 25, 103, 341, 973, 1403
Bbv12I GWGCWC 2 cut(s) 303, 1119
BbvI GCAGC 4 cut(s) 839, 860, 1230, 1798
BccI CCATC 6 cut(s) 200, 288, 320, 1037, 1076, 1930
BceAI ACGGC 2 cut(s) 1206, 1297
BciT130I CCWGG 4 cut(s) 354, 422, 910, 1512
BciVI GTATCC 1 cut(s) 206
BclI TGATCA 1 cut(s) 1270
BcnI CCSGG 1 cut(s) 1088
BcoDI GTCTC 3 cut(s) 910, 1195, 1492
BcuI ACTAGT 1 cut(s) 1553
BfaI CTAG 8 cut(s) 579, 800, 947, 1289, 1554, 1629, 2007, 2013
BfuI GTATCC 1 cut(s) 206
BisI GCNGC 6 cut(s) 828, 849, 1216, 1219, 1460, 1787
BlsI GCNGC 6 cut(s) 829, 850, 1217, 1220, 1461, 1788
Bme1390I CCNGG 5 cut(s) 354, 422, 910, 1088, 1512
Bme18I GGWCC 3 cut(s) 101, 659, 1506
BmgT120I GGNCC 4 cut(s) 101, 356, 659, 1506
BmiI GGNNCC 3 cut(s) 102, 1507, 1508
BmrFI CCNGG 5 cut(s) 354, 422, 910, 1088, 1512
BmsI GCATC 2 cut(s) 1393, 1789
BpiI GAAGAC 5 cut(s) 25, 103, 341, 973, 1403
BplI GAGNNNNNCTC 2 cut(s) 1572, 1604
BpmI CTGGAG 2 cut(s) 654, 892
BpuMI CCSGG 1 cut(s) 1088
Bsa29I ATCGAT 1 cut(s) 241
BsaJI CCNNGG 5 cut(s) 9, 420, 438, 1279, 1510
BsaXI ACNNNNNCTCC 6 cut(s) 825, 855, 890, 920, 1175, 1205
Bsc4I CCNNNNNNNGG 6 cut(s) 149, 286, 687, 688, 952, 2001
Bse1I ACTGG 5 cut(s) 221, 231, 637, 1537, 2034
Bse3DI GCAATG 2 cut(s) 964, 1329
BseBI CCWGG 4 cut(s) 354, 422, 910, 1512
BseCI ATCGAT 1 cut(s) 241
BseDI CCNNGG 5 cut(s) 9, 420, 438, 1279, 1510
BseGI GGATG 6 cut(s) 377, 532, 655, 697, 1230, 1752
BseLI CCNNNNNNNGG 6 cut(s) 149, 286, 687, 688, 952, 2001
BseMI GCAATG 2 cut(s) 964, 1329
BseMII CTCAG 3 cut(s) 54, 938, 1809
BseNI ACTGG 5 cut(s) 221, 231, 637, 1537, 2034
BseSI GKGCMC 2 cut(s) 512, 676
BseXI GCAGC 4 cut(s) 839, 860, 1230, 1798
BseYI CCCAGC 1 cut(s) 687
BsgI GTGCAG 1 cut(s) 846
Bsh1236I CGCG 1 cut(s) 1459
BshFI GGCC 6 cut(s) 357, 1086, 1315, 1807, 1969, 2005
BshVI ATCGAT 1 cut(s) 241
BsiHKAI GWGCWC 2 cut(s) 303, 1119
BsiSI CCGG 1 cut(s) 1087
BslFI GGGAC 3 cut(s) 57, 714, 1519
BslI CCNNNNNNNGG 6 cut(s) 149, 286, 687, 688, 952, 2001
BsmAI GTCTC 3 cut(s) 910, 1195, 1492
BsmFI GGGAC 3 cut(s) 57, 714, 1519
BsmI GAATGC 2 cut(s) 152, 1772
BsnI GGCC 6 cut(s) 357, 1086, 1315, 1807, 1969, 2005
Bsp1286I GDGCHC 5 cut(s) 303, 512, 676, 1119, 1455
Bsp143I GATC 7 cut(s) 192, 242, 442, 522, 1270, 1644, 1729
BspACI CCGC 6 cut(s) 60, 150, 178, 606, 1216, 1459
BspANI GGCC 6 cut(s) 357, 1086, 1315, 1807, 1969, 2005
BspCNI CTCAG 3 cut(s) 55, 937, 1810
BspDI ATCGAT 1 cut(s) 241
BspFNI CGCG 1 cut(s) 1459
BspHI TCATGA 1 cut(s) 1732
BspLI GGNNCC 3 cut(s) 102, 1507, 1508
BspPI GGATC 5 cut(s) 187, 237, 450, 517, 1737
BsrDI GCAATG 2 cut(s) 964, 1329
BsrI ACTGG 5 cut(s) 221, 231, 637, 1537, 2034
BssECI CCNNGG 5 cut(s) 9, 420, 438, 1279, 1510
BssMI GATC 7 cut(s) 192, 242, 442, 522, 1270, 1644, 1729
BssNAI GTATAC 1 cut(s) 1913
BssT1I CCWWGG 1 cut(s) 438
Bst1107I GTATAC 1 cut(s) 1913
Bst2UI CCWGG 4 cut(s) 354, 422, 910, 1512
BstAPI GCANNNNNTGC 1 cut(s) 575
BstC8I GCNNGC 4 cut(s) 457, 853, 888, 1614
BstDEI CTNAG 4 cut(s) 63, 924, 1186, 1818
BstDSI CCRYGG 2 cut(s) 9, 1279
BstF5I GGATG 6 cut(s) 377, 532, 655, 697, 1230, 1752
BstFNI CGCG 1 cut(s) 1459
BstHHI GCGC 3 cut(s) 294, 1176, 1498
BstKTI GATC 7 cut(s) 195, 245, 445, 525, 1273, 1647, 1732
BstMAI GTCTC 3 cut(s) 910, 1195, 1492
BstMBI GATC 7 cut(s) 192, 242, 442, 522, 1270, 1644, 1729
BstMWI GCNNNNNNNGC 7 cut(s) 11, 298, 414, 575, 1212, 1459, 1769
BstNI CCWGG 4 cut(s) 354, 422, 910, 1512
BstNSI RCATGY 1 cut(s) 855
BstSCI CCNGG 5 cut(s) 352, 420, 908, 1086, 1510
BstSLI GKGCMC 2 cut(s) 512, 676
BstUI CGCG 1 cut(s) 1459
BstV1I GCAGC 4 cut(s) 839, 860, 1230, 1798
BstV2I GAAGAC 5 cut(s) 25, 103, 341, 973, 1403
BstX2I RGATCY 3 cut(s) 192, 442, 522
BstYI RGATCY 3 cut(s) 192, 442, 522
BstZ17I GTATAC 1 cut(s) 1913
Bsu15I ATCGAT 1 cut(s) 241
BsuI GTATCC 1 cut(s) 206
BsuRI GGCC 6 cut(s) 357, 1086, 1315, 1807, 1969, 2005
BsuTUI ATCGAT 1 cut(s) 241
BtgI CCRYGG 2 cut(s) 9, 1279
BtgZI GCGATG 1 cut(s) 639
BtsCI GGATG 6 cut(s) 377, 532, 655, 697, 1230, 1752
BtsI GCAGTG 2 cut(s) 626, 1764
BtsIMutI CAGTG 9 cut(s) 159, 395, 626, 1030, 1260, 1352, 1544, 1699, 1764
Cac8I GCNNGC 4 cut(s) 457, 853, 888, 1614
CaiI CAGNNNCTG 1 cut(s) 2040
CciI TCATGA 1 cut(s) 1732
CfoI GCGC 3 cut(s) 294, 1176, 1498
Cfr13I GGNCC 4 cut(s) 101, 356, 659, 1506
ClaI ATCGAT 1 cut(s) 241
Csp6I GTAC 2 cut(s) 375, 1111
CspCI CAANNNNNGTGG 2 cut(s) 1740, 1775
CviQI GTAC 2 cut(s) 375, 1111
DdeI CTNAG 4 cut(s) 63, 924, 1186, 1818
DpnI GATC 7 cut(s) 194, 244, 444, 524, 1272, 1646, 1731
DpnII GATC 7 cut(s) 192, 242, 442, 522, 1270, 1644, 1729
DraI TTTAAA 1 cut(s) 121
EaeI YGGCCR 1 cut(s) 1084
Eco130I CCWWGG 1 cut(s) 438
Eco147I AGGCCT 1 cut(s) 1807
Eco24I GRGCYC 1 cut(s) 1455
Eco32I GATATC 1 cut(s) 1602
Eco47I GGWCC 3 cut(s) 101, 659, 1506
Eco57I CTGAAG 2 cut(s) 269, 1931
EcoO109I RGGNCCY 3 cut(s) 101, 356, 1506
EcoRII CCWGG 4 cut(s) 352, 420, 908, 1510
EcoRV GATATC 1 cut(s) 1602
EcoT14I CCWWGG 1 cut(s) 438
EcoT38I GRGCYC 1 cut(s) 1455
ErhI CCWWGG 1 cut(s) 438
FalI AAGNNNNNCTT 2 cut(s) 1868, 1900
FaqI GGGAC 3 cut(s) 57, 714, 1519
FbaI TGATCA 1 cut(s) 1270
FblI GTMKAC 2 cut(s) 1062, 1912
Fnu4HI GCNGC 6 cut(s) 828, 849, 1216, 1219, 1460, 1787
FokI GGATG 6 cut(s) 364, 519, 662, 704, 1217, 1759
FriOI GRGCYC 1 cut(s) 1455
Fsp4HI GCNGC 6 cut(s) 828, 849, 1216, 1219, 1460, 1787
FspBI CTAG 8 cut(s) 579, 800, 947, 1289, 1554, 1629, 2007, 2013
GlaI GCGC 3 cut(s) 293, 1175, 1497
GluI GCNGC 6 cut(s) 828, 849, 1216, 1219, 1460, 1787
GsaI CCCAGC 1 cut(s) 691
GsuI CTGGAG 2 cut(s) 654, 892
HaeIII GGCC 6 cut(s) 357, 1086, 1315, 1807, 1969, 2005
HapII CCGG 1 cut(s) 1087
HhaI GCGC 3 cut(s) 294, 1176, 1498
Hin6I GCGC 3 cut(s) 292, 1174, 1496
HinP1I GCGC 3 cut(s) 292, 1174, 1496
HincII GTYRAC 2 cut(s) 166, 1522
HindII GTYRAC 2 cut(s) 166, 1522
HpaII CCGG 1 cut(s) 1087
HphI GGTGA 7 cut(s) 440, 976, 1156, 1526, 1901, 1920, 1971
Hpy166II GTNNAC 7 cut(s) 159, 166, 1063, 1226, 1304, 1522, 1913
Hpy188I TCNGA 8 cut(s) 175, 189, 247, 522, 943, 1375, 1729, 1819
Hpy188III TCNNGA 5 cut(s) 143, 287, 1388, 1733, 1865
Hpy8I GTNNAC 7 cut(s) 159, 166, 1063, 1226, 1304, 1522, 1913
HpyCH4IV ACGT 2 cut(s) 900, 1129
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 298, 414, 575, 1212, 1459, 1769
HpyF3I CTNAG 4 cut(s) 63, 924, 1186, 1818
HpySE526I ACGT 2 cut(s) 900, 1129
HspAI GCGC 3 cut(s) 292, 1174, 1496
KflI GGGWCCC 1 cut(s) 1506
Ksp22I TGATCA 1 cut(s) 1270
Kzo9I GATC 7 cut(s) 192, 242, 442, 522, 1270, 1644, 1729
LmnI GCTCC 1 cut(s) 289
Lsp1109I GCAGC 4 cut(s) 839, 860, 1230, 1798
LweI GCATC 2 cut(s) 1393, 1789
MaeI CTAG 8 cut(s) 579, 800, 947, 1289, 1554, 1629, 2007, 2013
MaeII ACGT 2 cut(s) 900, 1129
MaeIII GTNAC 4 cut(s) 872, 1477, 1541, 1990
MalI GATC 7 cut(s) 194, 244, 444, 524, 1272, 1646, 1731
MboI GATC 7 cut(s) 192, 242, 442, 522, 1270, 1644, 1729
MfeI CAATTG 2 cut(s) 709, 1752
MflI RGATCY 3 cut(s) 192, 442, 522
MhlI GDGCHC 5 cut(s) 303, 512, 676, 1119, 1455
MlyI GAGTC 4 cut(s) 145, 798, 834, 1733
MmeI TCCRAC 2 cut(s) 220, 1707
MroXI GAANNNNTTC 1 cut(s) 1248
MseI TTAA 6 cut(s) 120, 183, 305, 336, 1434, 1740
MslI CAYNNNNRTG 5 cut(s) 667, 1389, 1638, 1777, 1933
MspA1I CMGCKG 1 cut(s) 62
MspI CCGG 1 cut(s) 1087
MspR9I CCNGG 5 cut(s) 354, 422, 910, 1088, 1512
MunI CAATTG 2 cut(s) 709, 1752
Mva1269I GAATGC 2 cut(s) 152, 1772
MvaI CCWGG 4 cut(s) 354, 422, 910, 1512
MvnI CGCG 1 cut(s) 1459
MwoI GCNNNNNNNGC 7 cut(s) 11, 298, 414, 575, 1212, 1459, 1769
NciI CCSGG 1 cut(s) 1088
NdeII GATC 7 cut(s) 192, 242, 442, 522, 1270, 1644, 1729
NlaIV GGNNCC 3 cut(s) 102, 1507, 1508
NmuCI GTSAC 2 cut(s) 1477, 1990
NspI RCATGY 1 cut(s) 855
PaeI GCATGC 1 cut(s) 855
PagI TCATGA 1 cut(s) 1732
PceI AGGCCT 1 cut(s) 1807
PcsI WCGNNNNNNNCGW 1 cut(s) 1219
PctI GAATGC 2 cut(s) 152, 1772
PdmI GAANNNNTTC 1 cut(s) 1248
PfeI GAWTC 6 cut(s) 238, 248, 257, 582, 1675, 1706
PfoI TCCNGGA 1 cut(s) 908
PkrI GCNGC 6 cut(s) 829, 850, 1217, 1220, 1461, 1788
PleI GAGTC 4 cut(s) 144, 798, 834, 1732
PpsI GAGTC 4 cut(s) 144, 798, 834, 1732
PpuMI RGGWCCY 2 cut(s) 101, 1506
Psp5II RGGWCCY 2 cut(s) 101, 1506
Psp6I CCWGG 4 cut(s) 352, 420, 908, 1510
PspFI CCCAGC 1 cut(s) 687
PspGI CCWGG 4 cut(s) 352, 420, 908, 1510
PspN4I GGNNCC 3 cut(s) 102, 1507, 1508
PspPI GGNCC 4 cut(s) 101, 356, 659, 1506
PspPPI RGGWCCY 2 cut(s) 101, 1506
PsrI GAACNNNNNNTAC 2 cut(s) 1287, 1319
PstNI CAGNNNCTG 1 cut(s) 2040
PsuI RGATCY 3 cut(s) 192, 442, 522
RsaI GTAC 2 cut(s) 376, 1112
RsaNI GTAC 2 cut(s) 375, 1111
RseI CAYNNNNRTG 5 cut(s) 667, 1389, 1638, 1777, 1933
SaqAI TTAA 6 cut(s) 120, 183, 305, 336, 1434, 1740
SatI GCNGC 6 cut(s) 828, 849, 1216, 1219, 1460, 1787
Sau3AI GATC 7 cut(s) 192, 242, 442, 522, 1270, 1644, 1729
Sau96I GGNCC 4 cut(s) 101, 356, 659, 1506
SchI GAGTC 4 cut(s) 145, 798, 834, 1733
ScrFI CCNGG 5 cut(s) 354, 422, 910, 1088, 1512
SduI GDGCHC 5 cut(s) 303, 512, 676, 1119, 1455
SfaNI GCATC 2 cut(s) 1393, 1789
SinI GGWCC 3 cut(s) 101, 659, 1506
SmiMI CAYNNNNRTG 5 cut(s) 667, 1389, 1638, 1777, 1933
SpeI ACTAGT 1 cut(s) 1553
SphI GCATGC 1 cut(s) 855
SseBI AGGCCT 1 cut(s) 1807
SsiI CCGC 6 cut(s) 60, 150, 178, 606, 1216, 1459
SspMI CTAG 8 cut(s) 579, 800, 947, 1289, 1554, 1629, 2007, 2013
StuI AGGCCT 1 cut(s) 1807
StyD4I CCNGG 5 cut(s) 352, 420, 908, 1086, 1510
StyI CCWWGG 1 cut(s) 438
TaiI ACGT 2 cut(s) 903, 1132
TaqI TCGA 2 cut(s) 241, 585
TauI GCSGC 2 cut(s) 1218, 1462
TfiI GAWTC 6 cut(s) 238, 248, 257, 582, 1675, 1706
Tru1I TTAA 6 cut(s) 120, 183, 305, 336, 1434, 1740
Tru9I TTAA 6 cut(s) 120, 183, 305, 336, 1434, 1740
TscAI CASTG 9 cut(s) 166, 402, 626, 1030, 1267, 1359, 1544, 1699, 1764
TseFI GTSAC 2 cut(s) 1477, 1990
TseI GCWGC 4 cut(s) 827, 848, 1218, 1786
Tsp45I GTSAC 2 cut(s) 1477, 1990
TspDTI ATGAA 6 cut(s) 251, 1160, 1164, 1257, 1698, 1749
TspGWI ACGGA 4 cut(s) 241, 250, 362, 1978
TspRI CASTG 9 cut(s) 166, 402, 626, 1030, 1267, 1359, 1544, 1699, 1764
VpaK11BI GGWCC 3 cut(s) 101, 659, 1506
XapI RAATTY 3 cut(s) 538, 1158, 1870
XceI RCATGY 1 cut(s) 855
XcmI CCANNNNNNNNNTGG 1 cut(s) 203
XmiI GTMKAC 2 cut(s) 1062, 1912
XmnI GAANNNNTTC 1 cut(s) 1248
XspI CTAG 8 cut(s) 579, 800, 947, 1289, 1554, 1629, 2007, 2013
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.