RLG00000009431

Release factor glutamine

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
52726918 .. 52727958
1041 bp
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UTR
Exon/CDS
Intron
RLM00000009431

Sequence Viewer

Length: 393 bp
ATGGTAACTGAACTACTTCCGGTTGATGTTATCATAGAACAATGCTCCCTCACTTTCAGAAATGAACTTGGGAGTACTGGGACCAGTTGTTCTACAATGATTGCATCAAGGAAGCAGAGATTTATCAGGGCAGAAATGGTCATACAAGAAGGGGTTTTGATTCCGAGGCCGGAGACTGAGCTCATCATTGATTTGGTGGGTGATGTGGTGAAGGATGAGGAGGGTTTCAGAGAGGGTTTGTGGGCAGATTTGGGGACTGGGAGTGGGGCTATTGCTATTGGGATTGGGAGGGTTTTGGGGACTGGTGTCAGAGTCATTGTAACTGATTTGAGTCTCATTGCGATTTCGGTTGCGGGTTTTAATGTGGAGAGGGAGGTATGGTTTACAGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

131

Amino Acids

14.02

Weight (kDa)

4.53

Isoelectric Point (pI)

23.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 353
AfaI GTAC 1 cut(s) 76
AloI GAACNNNNNNTCC 2 cut(s) 73, 105
AluBI AGCT 1 cut(s) 181
AluI AGCT 1 cut(s) 181
Alw21I GWGCWC 1 cut(s) 183
Alw26I GTCTC 2 cut(s) 167, 338
AoxI GGCC 1 cut(s) 167
Asp700I GAANNNNTTC 1 cut(s) 15
AspS9I GGNCC 1 cut(s) 81
AsuHPI GGTGA 2 cut(s) 212, 220
AvaII GGWCC 1 cut(s) 81
BanII GRGCYC 1 cut(s) 183
Bbv12I GWGCWC 1 cut(s) 183
BcoDI GTCTC 2 cut(s) 167, 338
BmcAI AGTACT 1 cut(s) 76
Bme18I GGWCC 1 cut(s) 81
BmgT120I GGNCC 1 cut(s) 81
BmiI GGNNCC 1 cut(s) 82
BmrI ACTGGG 2 cut(s) 87, 267
BmsI GCATC 1 cut(s) 113
BmuI ACTGGG 2 cut(s) 87, 267
BoxI GACNNNNGTC 1 cut(s) 305
BsaJI CCNNGG 1 cut(s) 164
BsaWI WCCGGW 1 cut(s) 19
BsaXI ACNNNNNCTCC 1 cut(s) 365
Bse1I ACTGG 4 cut(s) 82, 84, 262, 307
Bse3DI GCAATG 1 cut(s) 336
BseDI CCNNGG 1 cut(s) 164
BseGI GGATG 1 cut(s) 220
BseMI GCAATG 1 cut(s) 336
BseMII CTCAG 1 cut(s) 168
BseNI ACTGG 4 cut(s) 82, 84, 262, 307
BseRI GAGGAG 1 cut(s) 233
BshFI GGCC 1 cut(s) 169
BsiHKAI GWGCWC 1 cut(s) 183
BsiSI CCGG 2 cut(s) 20, 170
BslFI GGGAC 3 cut(s) 94, 268, 313
BsmAI GTCTC 2 cut(s) 167, 338
BsmFI GGGAC 3 cut(s) 94, 268, 313
BsnI GGCC 1 cut(s) 169
Bsp1286I GDGCHC 1 cut(s) 183
BspACI CCGC 1 cut(s) 353
BspANI GGCC 1 cut(s) 169
BspCNI CTCAG 1 cut(s) 169
BspLI GGNNCC 1 cut(s) 82
BsrDI GCAATG 1 cut(s) 336
BsrI ACTGG 4 cut(s) 82, 84, 262, 307
BssECI CCNNGG 1 cut(s) 164
BstDEI CTNAG 1 cut(s) 177
BstF5I GGATG 1 cut(s) 220
BstMAI GTCTC 2 cut(s) 167, 338
BstPAI GACNNNNGTC 1 cut(s) 305
BsuRI GGCC 1 cut(s) 169
BtsCI GGATG 1 cut(s) 220
Cfr13I GGNCC 1 cut(s) 81
Csp6I GTAC 1 cut(s) 75
CviJI RGCY 3 cut(s) 169, 181, 269
CviKI_1 RGCY 3 cut(s) 169, 181, 269
CviQI GTAC 1 cut(s) 75
DdeI CTNAG 1 cut(s) 177
Ecl136II GAGCTC 1 cut(s) 181
Eco24I GRGCYC 1 cut(s) 183
Eco47I GGWCC 1 cut(s) 81
Eco53kI GAGCTC 1 cut(s) 181
EcoICRI GAGCTC 1 cut(s) 181
EcoT38I GRGCYC 1 cut(s) 183
FaiI YATR 3 cut(s) 35, 143, 379
FaqI GGGAC 3 cut(s) 94, 268, 313
FauI CCCGC 1 cut(s) 346
FokI GGATG 1 cut(s) 227
FriOI GRGCYC 1 cut(s) 183
HaeIII GGCC 1 cut(s) 169
HapII CCGG 2 cut(s) 20, 170
HinfI GANTC 3 cut(s) 160, 312, 331
HpaII CCGG 2 cut(s) 20, 170
HphI GGTGA 2 cut(s) 212, 220
Hpy166II GTNNAC 1 cut(s) 384
Hpy188I TCNGA 4 cut(s) 59, 165, 230, 311
Hpy8I GTNNAC 1 cut(s) 384
HpyAV CCTTC 2 cut(s) 143, 205
HpyCH4V TGCA 1 cut(s) 104
HpyF3I CTNAG 1 cut(s) 177
LmnI GCTCC 1 cut(s) 50
LpnPI CCDG 8 cut(s) 33, 63, 97, 112, 183, 243, 288, 372
LweI GCATC 1 cut(s) 113
MaeIII GTNAC 2 cut(s) 4, 319
MhlI GDGCHC 1 cut(s) 183
MlyI GAGTC 2 cut(s) 321, 340
MnlI CCTC 8 cut(s) 59, 159, 211, 214, 226, 282, 363, 367
MroXI GAANNNNTTC 1 cut(s) 15
MseI TTAA 1 cut(s) 360
MspI CCGG 2 cut(s) 20, 170
NlaIV GGNNCC 1 cut(s) 82
PdmI GAANNNNTTC 1 cut(s) 15
PfeI GAWTC 1 cut(s) 160
PleI GAGTC 2 cut(s) 320, 339
PpsI GAGTC 2 cut(s) 320, 339
PshAI GACNNNNGTC 1 cut(s) 305
Psp124BI GAGCTC 1 cut(s) 183
PspN4I GGNNCC 1 cut(s) 82
PspPI GGNCC 1 cut(s) 81
RsaI GTAC 1 cut(s) 76
RsaNI GTAC 1 cut(s) 75
SacI GAGCTC 1 cut(s) 183
SaqAI TTAA 1 cut(s) 360
Sau96I GGNCC 1 cut(s) 81
ScaI AGTACT 1 cut(s) 76
SchI GAGTC 2 cut(s) 321, 340
SduI GDGCHC 1 cut(s) 183
SetI ASST 3 cut(s) 183, 378, 391
SfaNI GCATC 1 cut(s) 113
SinI GGWCC 1 cut(s) 81
SsiI CCGC 1 cut(s) 353
SstI GAGCTC 1 cut(s) 183
TatI WGTACW 1 cut(s) 74
TfiI GAWTC 1 cut(s) 160
Tru1I TTAA 1 cut(s) 360
Tru9I TTAA 1 cut(s) 360
TspDTI ATGAA 1 cut(s) 78
VpaK11BI GGWCC 1 cut(s) 81
XmnI GAANNNNTTC 1 cut(s) 15
ZrmI AGTACT 1 cut(s) 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.