Rh1CG018500

Release factor glutamine

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
3082364 .. 3092594
10231 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG018500.1

Sequence Viewer

Length: 264 bp
ATGATCGATCTCTGTCGAGTTGTTGGGTTGTGCGAGTTGTTTGAAGAAAGGGTTTTGATTCCGAGGCCGGAGACTGAGCTCATTGTTGATTTGGTGGGTGATGTGGTGAAGGATGAGGAGGGTTTCAGACAGGAGACTAAGGTAGAGTGTTTGAAAAAATATGACGAGAGGAGTAGTGCCCGAGAGTCTTCAAGAGCATGCAAGTACCTAAATTTGGACATTATTGAGAATAAGGGAATTGTTATTGAGCGTCTAAACTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

87

Amino Acids

10.07

Weight (kDa)

4.8

Isoelectric Point (pI)

58.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 211
AfaI GTAC 1 cut(s) 206
AfiI CCNNNNNNNGG 1 cut(s) 214
AgsI TTSAA 3 cut(s) 44, 154, 192
AluBI AGCT 1 cut(s) 79
AluI AGCT 1 cut(s) 79
Alw21I GWGCWC 1 cut(s) 81
Alw26I GTCTC 2 cut(s) 65, 128
Ama87I CYCGRG 1 cut(s) 180
AoxI GGCC 1 cut(s) 65
ApoI RAATTY 1 cut(s) 211
AsuHPI GGTGA 2 cut(s) 110, 118
AvaI CYCGRG 1 cut(s) 180
BaeGI GKGCMC 1 cut(s) 181
BanII GRGCYC 1 cut(s) 81
BbsI GAAGAC 1 cut(s) 180
Bbv12I GWGCWC 1 cut(s) 81
BcoDI GTCTC 2 cut(s) 65, 128
BmeT110I CYCGRG 1 cut(s) 180
BpiI GAAGAC 1 cut(s) 180
Bsa29I ATCGAT 1 cut(s) 6
BsaJI CCNNGG 1 cut(s) 62
Bsc4I CCNNNNNNNGG 1 cut(s) 214
BseCI ATCGAT 1 cut(s) 6
BseDI CCNNGG 1 cut(s) 62
BseGI GGATG 1 cut(s) 118
BseLI CCNNNNNNNGG 1 cut(s) 214
BseMII CTCAG 1 cut(s) 66
BseRI GAGGAG 2 cut(s) 131, 184
BseSI GKGCMC 1 cut(s) 181
BshFI GGCC 1 cut(s) 67
BshVI ATCGAT 1 cut(s) 6
BsiHKAI GWGCWC 1 cut(s) 81
BsiHKCI CYCGRG 1 cut(s) 180
BsiSI CCGG 1 cut(s) 68
BslI CCNNNNNNNGG 1 cut(s) 214
BsmAI GTCTC 2 cut(s) 65, 128
BsnI GGCC 1 cut(s) 67
BsoBI CYCGRG 1 cut(s) 180
Bsp1286I GDGCHC 2 cut(s) 81, 181
Bsp143I GATC 2 cut(s) 3, 7
BspANI GGCC 1 cut(s) 67
BspCNI CTCAG 1 cut(s) 67
BspDI ATCGAT 1 cut(s) 6
BssECI CCNNGG 1 cut(s) 62
BssMI GATC 2 cut(s) 3, 7
BstC8I GCNNGC 1 cut(s) 199
BstDEI CTNAG 2 cut(s) 75, 138
BstF5I GGATG 1 cut(s) 118
BstKTI GATC 2 cut(s) 6, 10
BstMAI GTCTC 2 cut(s) 65, 128
BstMBI GATC 2 cut(s) 3, 7
BstNSI RCATGY 1 cut(s) 201
BstSLI GKGCMC 1 cut(s) 181
BstV2I GAAGAC 1 cut(s) 180
Bsu15I ATCGAT 1 cut(s) 6
BsuRI GGCC 1 cut(s) 67
BsuTUI ATCGAT 1 cut(s) 6
BtsCI GGATG 1 cut(s) 118
Cac8I GCNNGC 1 cut(s) 199
ClaI ATCGAT 1 cut(s) 6
CseI GACGC 1 cut(s) 239
Csp6I GTAC 1 cut(s) 205
CviAII CATG 1 cut(s) 198
CviJI RGCY 2 cut(s) 67, 79
CviKI_1 RGCY 2 cut(s) 67, 79
CviQI GTAC 1 cut(s) 205
DdeI CTNAG 2 cut(s) 75, 138
DpnI GATC 2 cut(s) 5, 9
DpnII GATC 2 cut(s) 3, 7
Ecl136II GAGCTC 1 cut(s) 79
Eco24I GRGCYC 1 cut(s) 81
Eco53kI GAGCTC 1 cut(s) 79
Eco88I CYCGRG 1 cut(s) 180
EcoICRI GAGCTC 1 cut(s) 79
EcoT38I GRGCYC 1 cut(s) 81
FaeI CATG 1 cut(s) 201
FaiI YATR 2 cut(s) 162, 199
FatI CATG 1 cut(s) 197
FokI GGATG 1 cut(s) 125
FriOI GRGCYC 1 cut(s) 81
HaeIII GGCC 1 cut(s) 67
HapII CCGG 1 cut(s) 68
HgaI GACGC 1 cut(s) 239
Hin1II CATG 1 cut(s) 201
HinfI GANTC 2 cut(s) 58, 185
HpaII CCGG 1 cut(s) 68
HphI GGTGA 2 cut(s) 110, 118
Hpy188I TCNGA 2 cut(s) 63, 128
Hpy188III TCNNGA 1 cut(s) 192
HpyAV CCTTC 1 cut(s) 103
HpyCH4V TGCA 1 cut(s) 201
HpyF3I CTNAG 2 cut(s) 75, 138
Hsp92II CATG 1 cut(s) 201
Kzo9I GATC 2 cut(s) 3, 7
LpnPI CCDG 2 cut(s) 81, 116
MalI GATC 2 cut(s) 5, 9
MboI GATC 2 cut(s) 3, 7
MboII GAAGA 2 cut(s) 56, 180
MhlI GDGCHC 2 cut(s) 81, 181
MluCI AATT 2 cut(s) 211, 237
MlyI GAGTC 1 cut(s) 194
MnlI CCTC 4 cut(s) 57, 109, 112, 162
MspI CCGG 1 cut(s) 68
NdeII GATC 2 cut(s) 3, 7
NlaIII CATG 1 cut(s) 201
NspI RCATGY 1 cut(s) 201
PaeI GCATGC 1 cut(s) 201
PfeI GAWTC 1 cut(s) 58
PleI GAGTC 1 cut(s) 193
PpsI GAGTC 1 cut(s) 193
Psp124BI GAGCTC 1 cut(s) 81
RsaI GTAC 1 cut(s) 206
RsaNI GTAC 1 cut(s) 205
SacI GAGCTC 1 cut(s) 81
Sau3AI GATC 2 cut(s) 3, 7
SchI GAGTC 1 cut(s) 194
SduI GDGCHC 2 cut(s) 81, 181
SetI ASST 3 cut(s) 81, 144, 210
SphI GCATGC 1 cut(s) 201
Sse9I AATT 2 cut(s) 211, 237
SstI GAGCTC 1 cut(s) 81
TaqI TCGA 2 cut(s) 6, 16
TasI AATT 2 cut(s) 211, 237
TfiI GAWTC 1 cut(s) 58
XapI RAATTY 1 cut(s) 211
XceI RCATGY 1 cut(s) 201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.