Rh3AG054200

Release factor glutamine

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Reverse (-)
3820277 .. 3823495
3219 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG054200.1

Sequence Viewer

Length: 315 bp
ATGAGAGATGAAGGATCGAGAGAGTCTGATAGAGATGGACGAAGACAAACTGAGCTTAGCTGGAGTGATAGAGTTTGTATCGGCCGAAGACTGAGCTCATTGTTGATTTGGTGGGTGATGTGGCCGGTGAAGGATGAGGAGGGTTTAAGAGAGGGTTTGTGGGCAGATTTGGGGACTGGGAGTGGGGCTATTGCTATTGAGATTGGGAGGGTTTTGGGGACTGGTGGCAGAGTCATTGCAACTGATTTGAGTCCCACTGCGATTTCAGTTTTAATGTGGAGAGTGAGATTATGCAAGCAGTGGGAGGAGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

104

Amino Acids

11.82

Weight (kDa)

5.83

Isoelectric Point (pI)

45.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 22
AcoI YGGCCR 2 cut(s) 82, 122
AluBI AGCT 3 cut(s) 55, 60, 96
AluI AGCT 3 cut(s) 55, 60, 96
Alw21I GWGCWC 1 cut(s) 98
AlwI GGATC 1 cut(s) 22
AoxI GGCC 2 cut(s) 82, 122
AsuHPI GGTGA 2 cut(s) 127, 139
BanII GRGCYC 1 cut(s) 98
BbsI GAAGAC 2 cut(s) 49, 94
Bbv12I GWGCWC 1 cut(s) 98
BccI CCATC 1 cut(s) 29
BlpI GCTNAGC 1 cut(s) 56
BmrI ACTGGG 1 cut(s) 186
BmuI ACTGGG 1 cut(s) 186
BpiI GAAGAC 2 cut(s) 49, 94
BpmI CTGGAG 1 cut(s) 82
Bpu1102I GCTNAGC 1 cut(s) 56
Bse118I RCCGGY 1 cut(s) 124
Bse1I ACTGG 2 cut(s) 181, 226
Bse3DI GCAATG 1 cut(s) 234
BseGI GGATG 1 cut(s) 139
BseMI GCAATG 1 cut(s) 234
BseMII CTCAG 2 cut(s) 42, 83
BseNI ACTGG 2 cut(s) 181, 226
BseRI GAGGAG 1 cut(s) 152
BseX3I CGGCCG 1 cut(s) 82
Bsh1285I CGRYCG 1 cut(s) 85
BshFI GGCC 2 cut(s) 84, 124
BsiEI CGRYCG 1 cut(s) 85
BsiHKAI GWGCWC 1 cut(s) 98
BsiSI CCGG 1 cut(s) 125
BslFI GGGAC 3 cut(s) 187, 232, 237
BsmFI GGGAC 3 cut(s) 187, 232, 237
BsnI GGCC 2 cut(s) 84, 124
Bsp1286I GDGCHC 1 cut(s) 98
Bsp143I GATC 1 cut(s) 14
Bsp1720I GCTNAGC 1 cut(s) 56
BspANI GGCC 2 cut(s) 84, 124
BspCNI CTCAG 2 cut(s) 43, 84
BspPI GGATC 1 cut(s) 22
BsrDI GCAATG 1 cut(s) 234
BsrFI RCCGGY 1 cut(s) 124
BsrI ACTGG 2 cut(s) 181, 226
BssAI RCCGGY 1 cut(s) 124
BssMI GATC 1 cut(s) 14
BstC8I GCNNGC 1 cut(s) 296
BstDEI CTNAG 3 cut(s) 51, 56, 92
BstF5I GGATG 1 cut(s) 139
BstKTI GATC 1 cut(s) 17
BstMBI GATC 1 cut(s) 14
BstMCI CGRYCG 1 cut(s) 85
BstV2I GAAGAC 2 cut(s) 49, 94
BstZI CGGCCG 1 cut(s) 82
BsuRI GGCC 2 cut(s) 84, 124
BtsCI GGATG 1 cut(s) 139
BtsI GCAGTG 2 cut(s) 255, 305
BtsIMutI CAGTG 2 cut(s) 255, 305
Cac8I GCNNGC 1 cut(s) 296
Cfr10I RCCGGY 1 cut(s) 124
CviJI RGCY 6 cut(s) 55, 60, 84, 96, 124, 188
CviKI_1 RGCY 6 cut(s) 55, 60, 84, 96, 124, 188
DdeI CTNAG 3 cut(s) 51, 56, 92
DpnI GATC 1 cut(s) 16
DpnII GATC 1 cut(s) 14
EaeI YGGCCR 2 cut(s) 82, 122
EagI CGGCCG 1 cut(s) 82
Ecl136II GAGCTC 1 cut(s) 96
EclXI CGGCCG 1 cut(s) 82
Eco24I GRGCYC 1 cut(s) 98
Eco52I CGGCCG 1 cut(s) 82
Eco53kI GAGCTC 1 cut(s) 96
EcoICRI GAGCTC 1 cut(s) 96
EcoT38I GRGCYC 1 cut(s) 98
FaiI YATR 1 cut(s) 292
FaqI GGGAC 3 cut(s) 187, 232, 237
FokI GGATG 1 cut(s) 146
FriOI GRGCYC 1 cut(s) 98
GsuI CTGGAG 1 cut(s) 82
HaeIII GGCC 2 cut(s) 84, 124
HapII CCGG 1 cut(s) 125
HinfI GANTC 3 cut(s) 23, 231, 250
HpaII CCGG 1 cut(s) 125
HphI GGTGA 2 cut(s) 127, 139
Hpy188I TCNGA 1 cut(s) 28
Hpy188III TCNNGA 1 cut(s) 18
HpyAV CCTTC 2 cut(s) 5, 124
HpyCH4V TGCA 2 cut(s) 239, 294
HpyF3I CTNAG 3 cut(s) 51, 56, 92
Kzo9I GATC 1 cut(s) 14
LmnI GCTCC 1 cut(s) 307
LpnPI CCDG 4 cut(s) 46, 138, 162, 207
MalI GATC 1 cut(s) 16
MboI GATC 1 cut(s) 14
MboII GAAGA 2 cut(s) 54, 99
MhlI GDGCHC 1 cut(s) 98
MlyI GAGTC 3 cut(s) 32, 240, 259
MnlI CCTC 5 cut(s) 130, 133, 145, 201, 298
MseI TTAA 2 cut(s) 146, 272
MspI CCGG 1 cut(s) 125
NdeII GATC 1 cut(s) 14
PleI GAGTC 3 cut(s) 31, 239, 258
PpsI GAGTC 3 cut(s) 31, 239, 258
Psp124BI GAGCTC 1 cut(s) 98
SacI GAGCTC 1 cut(s) 98
SaqAI TTAA 2 cut(s) 146, 272
Sau3AI GATC 1 cut(s) 14
SchI GAGTC 3 cut(s) 32, 240, 259
SduI GDGCHC 1 cut(s) 98
SetI ASST 3 cut(s) 57, 62, 98
SgeI CNNG 6 cut(s) 30, 73, 137, 189, 234, 307
SstI GAGCTC 1 cut(s) 98
TaqI TCGA 1 cut(s) 17
Tru1I TTAA 2 cut(s) 146, 272
Tru9I TTAA 2 cut(s) 146, 272
TscAI CASTG 2 cut(s) 262, 305
TspDTI ATGAA 1 cut(s) 24
TspRI CASTG 2 cut(s) 262, 305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.