Rh5DG541600

Release factor glutamine

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
83354641 .. 83356010
1370 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG541600.1

Sequence Viewer

Length: 315 bp
ATGAACATATATATTCTCTTGATTTCTTTTATAAGCACATACTTGTTTTTTCATAATCTCTTGGTGCTGTATGTTCAAGAAGGGGTTTTGATTCTGAGGCCGGAGACTGAGCTCATTGTTGATTTGATGGGTGATGTGGTGAAGGATGAGGAGGGTTTTAGAGAGGGTTTGTGGGAGACTGGGAGTAGGGCTATTGCTATTGGGATTGGGAGGTTTTTGGGGACTGGTGTCAGAGTCATTGCAACTGATTTGAGTCTCACTGCGATTTCGGTTGCGGGTTTTAATGTGGAGAGGGAGGTATGGTTTACAGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

104

Amino Acids

11.61

Weight (kDa)

4.55

Isoelectric Point (pI)

29.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 32
AciI CCGC 1 cut(s) 275
AgsI TTSAA 1 cut(s) 77
AluBI AGCT 1 cut(s) 112
AluI AGCT 1 cut(s) 112
Alw21I GWGCWC 1 cut(s) 114
Alw26I GTCTC 3 cut(s) 98, 170, 260
AoxI GGCC 1 cut(s) 98
AsuHPI GGTGA 2 cut(s) 143, 151
BanII GRGCYC 1 cut(s) 114
Bbv12I GWGCWC 1 cut(s) 114
BccI CCATC 1 cut(s) 121
BcoDI GTCTC 3 cut(s) 98, 170, 260
BmrI ACTGGG 1 cut(s) 189
BmuI ACTGGG 1 cut(s) 189
BoxI GACNNNNGTC 1 cut(s) 227
BsaXI ACNNNNNCTCC 1 cut(s) 287
Bse1I ACTGG 2 cut(s) 184, 229
Bse3DI GCAATG 1 cut(s) 237
BseGI GGATG 1 cut(s) 151
BseMI GCAATG 1 cut(s) 237
BseMII CTCAG 2 cut(s) 86, 99
BseNI ACTGG 2 cut(s) 184, 229
BseRI GAGGAG 1 cut(s) 164
BshFI GGCC 1 cut(s) 100
BsiHKAI GWGCWC 1 cut(s) 114
BsiSI CCGG 1 cut(s) 101
BslFI GGGAC 1 cut(s) 235
BsmAI GTCTC 3 cut(s) 98, 170, 260
BsmFI GGGAC 1 cut(s) 235
BsnI GGCC 1 cut(s) 100
Bsp1286I GDGCHC 1 cut(s) 114
BspACI CCGC 1 cut(s) 275
BspANI GGCC 1 cut(s) 100
BspCNI CTCAG 2 cut(s) 87, 100
BsrDI GCAATG 1 cut(s) 237
BsrI ACTGG 2 cut(s) 184, 229
BstDEI CTNAG 2 cut(s) 95, 108
BstF5I GGATG 1 cut(s) 151
BstMAI GTCTC 3 cut(s) 98, 170, 260
BstPAI GACNNNNGTC 1 cut(s) 227
BsuRI GGCC 1 cut(s) 100
BtsCI GGATG 1 cut(s) 151
BtsI GCAGTG 1 cut(s) 258
BtsIMutI CAGTG 1 cut(s) 258
CviJI RGCY 3 cut(s) 100, 112, 191
CviKI_1 RGCY 3 cut(s) 100, 112, 191
DdeI CTNAG 2 cut(s) 95, 108
Ecl136II GAGCTC 1 cut(s) 112
Eco24I GRGCYC 1 cut(s) 114
Eco53kI GAGCTC 1 cut(s) 112
EcoICRI GAGCTC 1 cut(s) 112
EcoT38I GRGCYC 1 cut(s) 114
FaiI YATR 8 cut(s) 8, 10, 12, 32, 40, 54, 72, 301
FaqI GGGAC 1 cut(s) 235
FauI CCCGC 1 cut(s) 268
FokI GGATG 1 cut(s) 158
FriOI GRGCYC 1 cut(s) 114
HaeIII GGCC 1 cut(s) 100
HapII CCGG 1 cut(s) 101
HinfI GANTC 3 cut(s) 91, 234, 253
HpaII CCGG 1 cut(s) 101
HphI GGTGA 2 cut(s) 143, 151
Hpy166II GTNNAC 1 cut(s) 306
Hpy188I TCNGA 2 cut(s) 96, 233
Hpy188III TCNNGA 2 cut(s) 19, 77
Hpy8I GTNNAC 1 cut(s) 306
HpyAV CCTTC 2 cut(s) 74, 136
HpyCH4V TGCA 1 cut(s) 242
HpyF3I CTNAG 2 cut(s) 95, 108
LpnPI CCDG 4 cut(s) 114, 165, 210, 294
MhlI GDGCHC 1 cut(s) 114
MlyI GAGTC 2 cut(s) 243, 262
MnlI CCTC 7 cut(s) 90, 142, 145, 157, 204, 285, 289
MseI TTAA 1 cut(s) 282
MspI CCGG 1 cut(s) 101
PfeI GAWTC 1 cut(s) 91
PleI GAGTC 2 cut(s) 242, 261
PpsI GAGTC 2 cut(s) 242, 261
PshAI GACNNNNGTC 1 cut(s) 227
PsiI TTATAA 1 cut(s) 32
Psp124BI GAGCTC 1 cut(s) 114
SacI GAGCTC 1 cut(s) 114
SaqAI TTAA 1 cut(s) 282
SchI GAGTC 2 cut(s) 243, 262
SduI GDGCHC 1 cut(s) 114
SetI ASST 4 cut(s) 114, 215, 300, 313
SgeI CNNG 8 cut(s) 31, 55, 73, 89, 113, 192, 237, 288
SsiI CCGC 1 cut(s) 275
SstI GAGCTC 1 cut(s) 114
TfiI GAWTC 1 cut(s) 91
Tru1I TTAA 1 cut(s) 282
Tru9I TTAA 1 cut(s) 282
TscAI CASTG 1 cut(s) 265
TspDTI ATGAA 2 cut(s) 17, 41
TspRI CASTG 1 cut(s) 265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.