Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0001496

Physical Location & Seq

Genomic Coordinates Reverse (-)

57594854 .. 57599927

Gene Structure 5074 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009774

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGCATCGTCCTATGGGTCTTATTGCAGTGGCTTTCAAATCGAGGGAGGATCATCGAAAGCAAATTGAATTGGAGGAAGCACGTAAAGCTGGGCTAGCACCAGCTGAAGTTGATGAAGATGGGAAAGAGATCAATCCTCATATTCCGCAGTATATGTCATCCGCTCCTTGGTATCTTAATGCTGAGAAGCCGAGCTTGAAACATCAAAGGAAATGGAAATCAGATCCAAATTATACAAAATCGTGGTATGACAGAGGTGCGAAGATATTTCGGGCTGATAAGTACCGGAAAGGAGCTTGTGAAAACTGTGGGGCCATGACACACAATGCAAAGTCCTGTATGGAGAGGCCTAGAAAGAAAGGAGCAAAATGGACTAGCATGCACATTGCACCTGATGAAAAGATAGAGATTTTTGAGCTGGATTATGATGGCAAAAGGGATAGATGGAATGGTTTTGATGCAGCAACCTATGCTCGTGTCATTGAGAGATACGAAGCAAGGGATGAGGCTAGAAGGAAATATCTGAAAGAGCAGCAGCTGAAAAGGTTAGAGGAGAAAAATAGTAAGCAGAGTGGAGAAGGGGAGGTCAGTGATGATGACGAGGATGAAGATGCTCTGAAGGTCGATGAGGCCAAGGTTGATGAAAGCAAACAAATGGATTTTGCTAAGGTTGAGAAGCGTGTTCGCACAACCGGTGGTGGAAGTACGGGAACTGTCAGAAATTTGCGTATTCGGGAGGACACAGCGAAGTATCTTTTAAACCTTGATGTCAACTCTGCTTATTATGATCCCAAAACTCGGTCCATGCGTGAAGATCCTCTTCCTGATGCTGACCCAAATGAGAAGTTTTACGCAGGAGATAACAGATACAGAGTGAGTGGGCAAGCTTTAGAGTTCAAGCAGCTCAATATTCATGCATGGGAAGCATTTGAAAAAGGACAAGACTTTCACATGCAAGCTGCTCCATCTCAAGCGGAATTGCTTTTTAAGAACTATAAGGTCATTAAGGAGAAGTTGAAGTCAAAAATGAAAGATGCCATTATGGAGAAGTATGGGAATGCTGCAACTGTAGAAGAACTTCCTAAGGAGCTTCTTTTTGGACAAACTGAGAAAGAAGTTGAATATGACCGTGCTGGAAGAGTTATAAAGGGAATGGAGACATCCTTGCCGAAAAGCAAGTATGAGGAGGATGTTTTCATCAATAACCACACAAGCGTCTGGGGGTCATGGTGGAAGGATCACCAATGGGGATACAAGTGTTGCAAGCAAACAATTCGGAACAGTTATTGCACTGGTGCAGCTGGAATTGAGGCATCTGAGTCAGCTGCCAACCTAATGAAGGCAAATATTGACCGCAAAGCAGCCTCTGAAGAGACCTCTCCAACAGAAGAGAAAAGGCTTGCTACTTGGGGAGCTGATATACCTGAAGACTTGGTGCTTGACCAGAAAAAACTTGGTGATGCTCTTAAGAAGGAGGATGAGAGAAGGAAGGAAGAGAAGGATGAAAGAAAGCGTAAATATAATGTTACATGGAATGATGTGGTTACTCCTGAGGAGATGGAGGCATATCGGATGAAAAAGGCCACCGCAAACGGCGTCCACAGACCCACCGCAAACGGCGACCACAGGCTGTCAAACCACAGCGGCGGCGGCAACTGGCACCAGCGCTACTACCCCCCAATGACGCCGTATCGGTCCTCGTCCTCGTCAGCATCGTTCAAAGGCTGCTGCTGCTGCCTCTTCCTGCTCTTCTCCTTCCTGGTGCTCCTGGTCCTGGCCATCGTCCTCGTGATAATCCTGGCCGTGAAACCCAAGAAGCTGCAGTTCGATCTCCAACAAGTAGGAGTCCAGTACATGGGCATCAACTCACCCAATTCCACCACCGACCCGAACCTGGCCTCCTCCGCCTCTCTCTCCCTCAGCATTCGCCTGCTCTTCTCCGCCGTGAACCCCAACAAGGTCGGAATCAAGTACGGCGAGTCTAGGTTCACTGTCATGTACCACGGCATCCCTTTGGGCAAGGCCTCCGTCCCCGGCTTCTTTCAGCAGGCCCACAGCGTCAGGCAGGTCGTCGCCACCATTGCCGTCGATCCCGCCAATCTCATTCAGGCCGATGCCGCAGATTTAATCCGCGACGCCTCCCTCAACGACCGGGTCGAGCTCCGGGTCTTGGATGACGTCGGCGCCAAGATCCGCGTCTTGAACATCAATTCTCCAGGGTGGAAGGCGACGGGGCCGATTCGATCAAGACGTTCGATCAAGGTTGCGATGCACTGCCATCAGTTACAGGCGAGACGGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Slu7

Protein Analysis

768

Amino Acids

87.22

Weight (kDa)

8.93

Isoelectric Point (pI)

44.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Slu7	PF11708	140 - 409	2.2e-95	Pre-mRNA splicing Prp18-interacting factor
LEA_2	PF03168	648 - 727	1.6e-09	Late embryogenesis abundant protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001496)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65660 AT3G45950 AT4G37120
fragaria_vesca	FvH4_2g21480 FvH4_4g03640 FvH4_5g13320
malus_domestica	MD05G1197300.v1.1 MD10G1184000.v1.1 MD16G1219100.v1.1
prunus_persica	Prupe.1G039500_v2.0.a1 Prupe.1G039500_v2.0.a1 Prupe.1G039500_v2.0.a1 Prupe.1G039500_v2.0.a1 Prupe.1G039500_v2.0.a1 Prupe.1G039500_v2.0.a1 Prupe.1G039500_v2.0.a1 Prupe.8G223800_v2.0.a1
pyrus_communis	pycom05g18440 pycom10g15930 pycom16g18260
rosa_chinensis	RchiOBHm_Chr4g0393021 RchiOBHm_Chr6g0288131 RchiOBHm_Chr7g0183821
rosa_laevigata	RLG00000005020 RLG00000009774
rosa_multiflora	Rmu_sc0003610.1_g000043 Rmu_sc0010766.1_g000006 Rmu_sc0034700.1_g000001
rosa_roxburghii	Rroxscaffold_3G00270180 Rroxscaffold_5G00338120 Rroxscaffold_7G00180470
rosa_rugosa	Rorug04G0002700 Rorug04G0002800 Rorug06G0194300 Rorug06G0460700 Rorug06G0460800
rosa_samantha	Rh4AG045400 Rh4BG041400 Rh4CG049000 Rh4DG043300 Rh6AG304700 Rh6BG310700 Rh6CG318800 Rh6DG303700 Rh7AG061400 Rh7BG061500 Rh7CG063100 Rh7DG061500
rosa_wichuraiana	Rw4G003580 Rw6G026360 Rw7G005100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1145
AatII	GACGTC	1 cut(s)	2181
Acc36I	ACCTGC	1 cut(s)	2056
AccB1I	GGYRCC	2 cut(s)	1659, 2183
AccB7I	CCANNNNNTGG	1 cut(s)	1855
AccBSI	CCGCTC	1 cut(s)	164
AccII	CGCG	2 cut(s)	2133, 2196
AclWI	GGATC	7 cut(s)	57, 218, 782, 809, 1245, 2084, 2185
AcoI	YGGCCR	2 cut(s)	1776, 1800
AcsI	RAATTY	1 cut(s)	721
AcuI	CTGAAG	4 cut(s)	126, 638, 1389, 1446
AcyI	GRCGYC	5 cut(s)	1596, 1685, 2136, 2178, 2184
AfaI	GTAC	5 cut(s)	284, 706, 1853, 1973, 2000
AfeI	AGCGCT	1 cut(s)	1667
AfiI	CCNNNNNNNGG	8 cut(s)	168, 798, 1339, 1774, 1855, 1894, 1957, 2170
AflII	CTTAAG	1 cut(s)	1466
AgeI	ACCGGT	1 cut(s)	692
AgsI	TTSAA	9 cut(s)	37, 68, 199, 898, 932, 1018, 1121, 1720, 2203
AjnI	CCWGG	6 cut(s)	1758, 1767, 1773, 1797, 1893, 2215
AloI	GAACNNNNNNTCC	2 cut(s)	1883, 1915
Alw21I	GWGCWC	2 cut(s)	1767, 2163
Alw26I	GTCTC	3 cut(s)	1151, 1367, 2287
AlwI	GGATC	7 cut(s)	57, 218, 782, 809, 1245, 2084, 2185
AlwNI	CAGNNNCTG	2 cut(s)	538, 1367
Aor51HI	AGCGCT	1 cut(s)	1667
ApoI	RAATTY	1 cut(s)	721
AsiGI	ACCGGT	1 cut(s)	692
Asp700I	GAANNNNTTC	1 cut(s)	1077
AspLEI	GCGC	2 cut(s)	1668, 2186
AspS9I	GGNCC	6 cut(s)	312, 801, 1695, 1771, 2050, 2234
AsuC2I	CCSGG	3 cut(s)	2034, 2153, 2165
AsuHPI	GGTGA	3 cut(s)	1232, 1469, 1860
AsuNHI	GCTAGC	1 cut(s)	94
AvaII	GGWCC	3 cut(s)	801, 1695, 1771
AxyI	CCTNAGG	2 cut(s)	1083, 1551
BaeI	ACNNNNGTAYC	2 cut(s)	1243, 1276
BalI	TGGCCA	1 cut(s)	1778
BanI	GGYRCC	2 cut(s)	1659, 2183
BanII	GRGCYC	1 cut(s)	2163
BarI	GAAGNNNNNNTAC	2 cut(s)	1062, 1094
BauI	CACGAG	2 cut(s)	474, 1787
BbsI	GAAGAC	1 cut(s)	1434
Bbv12I	GWGCWC	2 cut(s)	1767, 2163
BbvCI	CCTCAGC	1 cut(s)	1919
BccI	CCATC	7 cut(s)	113, 422, 438, 973, 1552, 1787, 2286
BceAI	ACGGC	8 cut(s)	1609, 1633, 1672, 1787, 1928, 1990, 2020, 2069
BcgI	CGANNNNNNTGC	2 cut(s)	1256, 1290
BciT130I	CCWGG	6 cut(s)	1760, 1769, 1775, 1799, 1895, 2217
BciVI	GTATCC	1 cut(s)	1244
BcnI	CCSGG	3 cut(s)	2034, 2153, 2165
BcoDI	GTCTC	3 cut(s)	1151, 1367, 2287
BfaI	CTAG	5 cut(s)	95, 351, 375, 510, 1983
BfmI	CTRYAG	2 cut(s)	1068, 1820
BfoI	RGCGCY	2 cut(s)	1669, 2187
BfrI	CTTAAG	1 cut(s)	1466
BfuAI	ACCTGC	1 cut(s)	2056
BfuI	GTATCC	1 cut(s)	1244
Bme1390I	CCNGG	9 cut(s)	1760, 1769, 1775, 1799, 1895, 2034, 2153, 2165, 2217
Bme18I	GGWCC	3 cut(s)	801, 1695, 1771
BmgT120I	GGNCC	6 cut(s)	312, 801, 1695, 1771, 2050, 2234
BmiI	GGNNCC	4 cut(s)	313, 1661, 2185, 2235
BmrFI	CCNGG	9 cut(s)	1760, 1769, 1775, 1799, 1895, 2034, 2153, 2165, 2217
BmtI	GCTAGC	1 cut(s)	98
BpiI	GAAGAC	1 cut(s)	1434
BpmI	CTGGAG	1 cut(s)	2199
Bpu10I	CCTNAGC	2 cut(s)	666, 1919
BpuEI	CTTGAG	1 cut(s)	954
BpuMI	CCSGG	3 cut(s)	2034, 2153, 2165
BsaAI	YACGTR	1 cut(s)	83
BsaHI	GRCGYC	5 cut(s)	1596, 1685, 2136, 2178, 2184
BsaI	GGTCTC	1 cut(s)	1367
BsaJI	CCNNGG	5 cut(s)	167, 633, 2002, 2032, 2216
BsaWI	WCCGGW	2 cut(s)	285, 692
BsaXI	ACNNNNNCTCC	2 cut(s)	1883, 1913
Bsc4I	CCNNNNNNNGG	8 cut(s)	168, 798, 1339, 1774, 1855, 1894, 1957, 2170
Bse118I	RCCGGY	1 cut(s)	692
Bse1I	ACTGG	3 cut(s)	1297, 1661, 1849
Bse21I	CCTNAGG	2 cut(s)	1083, 1551
Bse3DI	GCAATG	2 cut(s)	384, 2079
BseBI	CCWGG	6 cut(s)	1760, 1769, 1775, 1799, 1895, 2217
BseDI	CCNNGG	5 cut(s)	167, 633, 2002, 2032, 2216
BseLI	CCNNNNNNNGG	8 cut(s)	168, 798, 1339, 1774, 1855, 1894, 1957, 2170
BseMI	GCAATG	2 cut(s)	384, 2079
BseMII	CTCAG	5 cut(s)	174, 1098, 1308, 1542, 1933
BseNI	ACTGG	3 cut(s)	1297, 1661, 1849
BseRI	GAGGAG	4 cut(s)	566, 1199, 1568, 1891
BseYI	CCCAGC	1 cut(s)	89
BsgI	GTGCAG	1 cut(s)	1317
Bsh1236I	CGCG	2 cut(s)	2133, 2196
Bsh1285I	CGRYCG	1 cut(s)	2152
BshNI	GGYRCC	2 cut(s)	1659, 2183
BshTI	ACCGGT	1 cut(s)	692
BsiEI	CGRYCG	1 cut(s)	2152
BsiHKAI	GWGCWC	2 cut(s)	1767, 2163
BsiSI	CCGG	5 cut(s)	286, 693, 2034, 2152, 2164
BslFI	GGGAC	1 cut(s)	2015
BslI	CCNNNNNNNGG	8 cut(s)	168, 798, 1339, 1774, 1855, 1894, 1957, 2170
BsmAI	GTCTC	3 cut(s)	1151, 1367, 2287
BsmBI	CGTCTC	1 cut(s)	2287
BsmFI	GGGAC	1 cut(s)	2015
BsmI	GAATGC	2 cut(s)	1063, 1923
Bso31I	GGTCTC	1 cut(s)	1367
Bsp1286I	GDGCHC	2 cut(s)	1767, 2163
BspCNI	CTCAG	5 cut(s)	175, 1099, 1309, 1543, 1932
BspFNI	CGCG	2 cut(s)	2133, 2196
BspLI	GGNNCC	4 cut(s)	313, 1661, 2185, 2235
BspMAI	CTGCAG	1 cut(s)	1824
BspMI	ACCTGC	1 cut(s)	2056
BspOI	GCTAGC	1 cut(s)	98
BspPI	GGATC	7 cut(s)	57, 218, 782, 809, 1245, 2084, 2185
BspQI	GCTCTTC	2 cut(s)	1754, 1940
BspT107I	GGYRCC	2 cut(s)	1659, 2183
BspTI	CTTAAG	1 cut(s)	1466
BspTNI	GGTCTC	1 cut(s)	1367
BsrBI	CCGCTC	1 cut(s)	164
BsrDI	GCAATG	2 cut(s)	384, 2079
BsrFI	RCCGGY	1 cut(s)	692
BsrI	ACTGG	3 cut(s)	1297, 1661, 1849
BssAI	RCCGGY	1 cut(s)	692
BssECI	CCNNGG	5 cut(s)	167, 633, 2002, 2032, 2216
BssNI	GRCGYC	5 cut(s)	1596, 1685, 2136, 2178, 2184
BssSI	CACGAG	2 cut(s)	474, 1787
BssT1I	CCWWGG	2 cut(s)	167, 633
Bst2BI	CACGAG	2 cut(s)	474, 1787
Bst2UI	CCWGG	6 cut(s)	1760, 1769, 1775, 1799, 1895, 2217
Bst4CI	ACNGT	6 cut(s)	308, 715, 1069, 1130, 1283, 1993
Bst6I	CTCTTC	8 cut(s)	825, 1132, 1365, 1383, 1488, 1745, 1754, 1940
BstACI	GRCGYC	5 cut(s)	1596, 1685, 2136, 2178, 2184
BstAFI	CTTAAG	1 cut(s)	1466
BstAPI	GCANNNNNTGC	1 cut(s)	470
BstBAI	YACGTR	1 cut(s)	83
BstC8I	GCNNGC	8 cut(s)	96, 380, 885, 957, 1265, 1401, 1931, 2049
BstDEI	CTNAG	7 cut(s)	183, 666, 1083, 1107, 1317, 1551, 1919
BstDSI	CCRYGG	1 cut(s)	2002
BstENI	CCTNNNNNAGG	1 cut(s)	1337
BstFNI	CGCG	2 cut(s)	2133, 2196
BstH2I	RGCGCY	2 cut(s)	1669, 2187
BstHHI	GCGC	2 cut(s)	1668, 2186
BstMAI	GTCTC	3 cut(s)	1151, 1367, 2287
BstMCI	CGRYCG	1 cut(s)	2152
BstNI	CCWGG	6 cut(s)	1760, 1769, 1775, 1799, 1895, 2217
BstNSI	RCATGY	2 cut(s)	382, 955
BstSCI	CCNGG	9 cut(s)	1758, 1767, 1773, 1797, 1893, 2032, 2151, 2163, 2215
BstSFI	CTRYAG	2 cut(s)	1068, 1820
BstUI	CGCG	2 cut(s)	2133, 2196
BstV2I	GAAGAC	1 cut(s)	1434
BstX2I	RGATCY	3 cut(s)	223, 814, 2190
BstYI	RGATCY	3 cut(s)	223, 814, 2190
Bsu36I	CCTNAGG	2 cut(s)	1083, 1551
BsuI	GTATCC	1 cut(s)	1244
BtgI	CCRYGG	1 cut(s)	2002
BtgZI	GCGATG	1 cut(s)	2282
BtsI	GCAGTG	2 cut(s)	33, 2272
BtsIMutI	CAGTG	5 cut(s)	33, 595, 1290, 1989, 2272
BveI	ACCTGC	1 cut(s)	2056
Cac8I	GCNNGC	8 cut(s)	96, 380, 885, 957, 1265, 1401, 1931, 2049
CaiI	CAGNNNCTG	2 cut(s)	538, 1367
CfoI	GCGC	2 cut(s)	1668, 2186
Cfr10I	RCCGGY	1 cut(s)	692
Cfr13I	GGNCC	6 cut(s)	312, 801, 1695, 1771, 2050, 2234
CseI	GACGC	6 cut(s)	1204, 1585, 1693, 2047, 2144, 2185
Csp6I	GTAC	5 cut(s)	283, 705, 1852, 1972, 1999
CspAI	ACCGGT	1 cut(s)	692
CviQI	GTAC	5 cut(s)	283, 705, 1852, 1972, 1999
DdeI	CTNAG	7 cut(s)	183, 666, 1083, 1107, 1317, 1551, 1919
DinI	GGCGCC	1 cut(s)	2185
DraI	TTTAAA	1 cut(s)	759
EaeI	YGGCCR	2 cut(s)	1776, 1800
Eam1104I	CTCTTC	8 cut(s)	825, 1132, 1365, 1383, 1488, 1745, 1754, 1940
EarI	CTCTTC	8 cut(s)	825, 1132, 1365, 1383, 1488, 1745, 1754, 1940
EciI	GGCGGA	2 cut(s)	1894, 1930
Ecl136II	GAGCTC	1 cut(s)	2161
Eco130I	CCWWGG	2 cut(s)	167, 633
Eco147I	AGGCCT	2 cut(s)	349, 2024
Eco24I	GRGCYC	1 cut(s)	2163
Eco31I	GGTCTC	1 cut(s)	1367
Eco47I	GGWCC	3 cut(s)	801, 1695, 1771
Eco47III	AGCGCT	1 cut(s)	1667
Eco53kI	GAGCTC	1 cut(s)	2161
Eco57I	CTGAAG	4 cut(s)	126, 638, 1389, 1446
Eco81I	CCTNAGG	2 cut(s)	1083, 1551
EcoICRI	GAGCTC	1 cut(s)	2161
EcoNI	CCTNNNNNAGG	1 cut(s)	1337
EcoRII	CCWGG	6 cut(s)	1758, 1767, 1773, 1797, 1893, 2215
EcoT14I	CCWWGG	2 cut(s)	167, 633
EcoT22I	ATGCAT	2 cut(s)	6, 919
EcoT38I	GRGCYC	1 cut(s)	2163
EgeI	GGCGCC	1 cut(s)	2185
EheI	GGCGCC	1 cut(s)	2185
ErhI	CCWWGG	2 cut(s)	167, 633
Esp3I	CGTCTC	1 cut(s)	2287
FalI	AAGNNNNNCTT	4 cut(s)	179, 211, 804, 836
FaqI	GGGAC	1 cut(s)	2015
FauI	CCCGC	1 cut(s)	2101
FriOI	GRGCYC	1 cut(s)	2163
FspBI	CTAG	5 cut(s)	95, 351, 375, 510, 1983
GlaI	GCGC	2 cut(s)	1667, 2185
GsaI	CCCAGC	1 cut(s)	93
GsuI	CTGGAG	1 cut(s)	2199
HaeII	RGCGCY	2 cut(s)	1669, 2187
HapII	CCGG	5 cut(s)	286, 693, 2034, 2152, 2164
HgaI	GACGC	6 cut(s)	1204, 1585, 1693, 2047, 2144, 2185
HhaI	GCGC	2 cut(s)	1668, 2186
Hin1I	GRCGYC	5 cut(s)	1596, 1685, 2136, 2178, 2184
Hin6I	GCGC	2 cut(s)	1666, 2184
HinP1I	GCGC	2 cut(s)	1666, 2184
HincII	GTYRAC	1 cut(s)	772
HindII	GTYRAC	1 cut(s)	772
HindIII	AAGCTT	1 cut(s)	885
HinfI	GANTC	5 cut(s)	1319, 1845, 1965, 1979, 2239
HpaII	CCGG	5 cut(s)	286, 693, 2034, 2152, 2164
HphI	GGTGA	3 cut(s)	1232, 1469, 1860
Hpy166II	GTNNAC	4 cut(s)	772, 1600, 1948, 1989
Hpy188I	TCNGA	9 cut(s)	223, 525, 618, 719, 1278, 1318, 1369, 1572, 1964
Hpy188III	TCNNGA	6 cut(s)	734, 824, 1550, 1789, 2200, 2247
Hpy8I	GTNNAC	4 cut(s)	772, 1600, 1948, 1989
Hpy99I	CGWCG	5 cut(s)	2075, 2090, 2138, 2183, 2233
HpyCH4III	ACNGT	6 cut(s)	308, 715, 1069, 1130, 1283, 1993
HpyCH4IV	ACGT	3 cut(s)	82, 2178, 2251
HpyF3I	CTNAG	7 cut(s)	183, 666, 1083, 1107, 1317, 1551, 1919
HpySE526I	ACGT	3 cut(s)	82, 2178, 2251
Hsp92I	GRCGYC	5 cut(s)	1596, 1685, 2136, 2178, 2184
HspAI	GCGC	2 cut(s)	1666, 2184
KasI	GGCGCC	1 cut(s)	2183
LguI	GCTCTTC	2 cut(s)	1754, 1940
LmnI	GCTCC	8 cut(s)	169, 293, 362, 967, 1087, 1412, 1770, 2166
MaeI	CTAG	5 cut(s)	95, 351, 375, 510, 1983
MaeII	ACGT	3 cut(s)	82, 2178, 2251
MaeIII	GTNAC	3 cut(s)	1525, 1543, 2283
MbiI	CCGCTC	1 cut(s)	164
MflI	RGATCY	3 cut(s)	223, 814, 2190
MhlI	GDGCHC	2 cut(s)	1767, 2163
MlsI	TGGCCA	1 cut(s)	1778
MluCI	AATT	9 cut(s)	63, 68, 229, 721, 977, 1272, 1305, 1873, 2209
MluNI	TGGCCA	1 cut(s)	1778
Mly113I	GGCGCC	1 cut(s)	2184
MlyI	GAGTC	3 cut(s)	1328, 1854, 1988
MmeI	TCCRAC	3 cut(s)	1406, 1858, 1942
Mox20I	TGGCCA	1 cut(s)	1778
Mph1103I	ATGCAT	2 cut(s)	6, 919
MroXI	GAANNNNTTC	1 cut(s)	1077
MscI	TGGCCA	1 cut(s)	1778
MseI	TTAA	7 cut(s)	177, 758, 987, 1005, 1467, 2126, 2302
MslI	CAYNNNNRTG	1 cut(s)	1994
Msp20I	TGGCCA	1 cut(s)	1778
MspA1I	CMGCKG	5 cut(s)	104, 538, 1301, 1325, 1644
MspCI	CTTAAG	1 cut(s)	1466
MspI	CCGG	5 cut(s)	286, 693, 2034, 2152, 2164
MspR9I	CCNGG	9 cut(s)	1760, 1769, 1775, 1799, 1895, 2034, 2153, 2165, 2217
Mva1269I	GAATGC	2 cut(s)	1063, 1923
MvaI	CCWGG	6 cut(s)	1760, 1769, 1775, 1799, 1895, 2217
MvnI	CGCG	2 cut(s)	2133, 2196
NarI	GGCGCC	1 cut(s)	2184
NciI	CCSGG	3 cut(s)	2034, 2153, 2165
NheI	GCTAGC	1 cut(s)	94
NlaIV	GGNNCC	4 cut(s)	313, 1661, 2185, 2235
NmeAIII	GCCGAG	1 cut(s)	216
NsiI	ATGCAT	2 cut(s)	6, 919
NspI	RCATGY	2 cut(s)	382, 955
PaeI	GCATGC	1 cut(s)	382
PceI	AGGCCT	2 cut(s)	349, 2024
PciSI	GCTCTTC	2 cut(s)	1754, 1940
PcsI	WCGNNNNNNNCGW	4 cut(s)	805, 1712, 2154, 2248
PctI	GAATGC	2 cut(s)	1063, 1923
PdmI	GAANNNNTTC	1 cut(s)	1077
PfeI	GAWTC	2 cut(s)	1965, 2239
PflFI	GACNNNGTC	1 cut(s)	2153
PflMI	CCANNNNNTGG	1 cut(s)	1855
PinAI	ACCGGT	1 cut(s)	692
PleI	GAGTC	3 cut(s)	1327, 1853, 1987
PluTI	GGCGCC	1 cut(s)	2187
PpsI	GAGTC	3 cut(s)	1327, 1853, 1987
Ppu21I	YACGTR	1 cut(s)	83
PsiI	TTATAA	1 cut(s)	1145
Psp124BI	GAGCTC	1 cut(s)	2163
Psp6I	CCWGG	6 cut(s)	1758, 1767, 1773, 1797, 1893, 2215
PspFI	CCCAGC	1 cut(s)	89
PspGI	CCWGG	6 cut(s)	1758, 1767, 1773, 1797, 1893, 2215
PspN4I	GGNNCC	4 cut(s)	313, 1661, 2185, 2235
PspPI	GGNCC	6 cut(s)	312, 801, 1695, 1771, 2050, 2234
PstI	CTGCAG	1 cut(s)	1824
PstNI	CAGNNNCTG	2 cut(s)	538, 1367
PsuI	RGATCY	3 cut(s)	223, 814, 2190
PsyI	GACNNNGTC	1 cut(s)	2153
PvuII	CAGCTG	4 cut(s)	104, 538, 1301, 1325
RsaI	GTAC	5 cut(s)	284, 706, 1853, 1973, 2000
RsaNI	GTAC	5 cut(s)	283, 705, 1852, 1972, 1999
RseI	CAYNNNNRTG	1 cut(s)	1994
SacI	GAGCTC	1 cut(s)	2163
SapI	GCTCTTC	2 cut(s)	1754, 1940
SaqAI	TTAA	7 cut(s)	177, 758, 987, 1005, 1467, 2126, 2302
Sau96I	GGNCC	6 cut(s)	312, 801, 1695, 1771, 2050, 2234
SchI	GAGTC	3 cut(s)	1328, 1854, 1988
ScrFI	CCNGG	9 cut(s)	1760, 1769, 1775, 1799, 1895, 2034, 2153, 2165, 2217
SduI	GDGCHC	2 cut(s)	1767, 2163
SfcI	CTRYAG	2 cut(s)	1068, 1820
SfoI	GGCGCC	1 cut(s)	2185
SinI	GGWCC	3 cut(s)	801, 1695, 1771
SmiMI	CAYNNNNRTG	1 cut(s)	1994
SmlI	CTYRAG	2 cut(s)	969, 1466
SmoI	CTYRAG	2 cut(s)	969, 1466
SphI	GCATGC	1 cut(s)	382
Sse9I	AATT	9 cut(s)	63, 68, 229, 721, 977, 1272, 1305, 1873, 2209
SseBI	AGGCCT	2 cut(s)	349, 2024
SspDI	GGCGCC	1 cut(s)	2183
SspI	AATATT	2 cut(s)	910, 1348
SspMI	CTAG	5 cut(s)	95, 351, 375, 510, 1983
SstI	GAGCTC	1 cut(s)	2163
StuI	AGGCCT	2 cut(s)	349, 2024
StyD4I	CCNGG	9 cut(s)	1758, 1767, 1773, 1797, 1893, 2032, 2151, 2163, 2215
StyI	CCWWGG	2 cut(s)	167, 633
TaaI	ACNGT	6 cut(s)	308, 715, 1069, 1130, 1283, 1993
TaiI	ACGT	3 cut(s)	85, 2181, 2254
TaqI	TCGA	8 cut(s)	41, 55, 624, 1827, 2088, 2157, 2242, 2255
TaqII	GACCGA	2 cut(s)	789, 1683
TasI	AATT	9 cut(s)	63, 68, 229, 721, 977, 1272, 1305, 1873, 2209
TatI	WGTACW	1 cut(s)	1851
TauI	GCSGC	4 cut(s)	1647, 1650, 1653, 2120
TfiI	GAWTC	2 cut(s)	1965, 2239
Tru1I	TTAA	7 cut(s)	177, 758, 987, 1005, 1467, 2126, 2302
Tru9I	TTAA	7 cut(s)	177, 758, 987, 1005, 1467, 2126, 2302
TscAI	CASTG	5 cut(s)	33, 595, 1297, 1996, 2279
TspGWI	ACGGA	1 cut(s)	2017
TspRI	CASTG	5 cut(s)	33, 595, 1297, 1996, 2279
Tth111I	GACNNNGTC	1 cut(s)	2153
Van91I	CCANNNNNTGG	1 cut(s)	1855
Vha464I	CTTAAG	1 cut(s)	1466
VpaK11BI	GGWCC	3 cut(s)	801, 1695, 1771
XagI	CCTNNNNNAGG	1 cut(s)	1337
XapI	RAATTY	1 cut(s)	721
XceI	RCATGY	2 cut(s)	382, 955
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1451
XmnI	GAANNNNTTC	1 cut(s)	1077
XspI	CTAG	5 cut(s)	95, 351, 375, 510, 1983
ZraI	GACGTC	1 cut(s)	2179
Zsp2I	ATGCAT	2 cut(s)	6, 919

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.