Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0001496

Physical Location & Seq

Genomic Coordinates Forward (+)

9697855 .. 9702445

Gene Structure 4591 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG049000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGATTCTGCGTCGTCTAGAAACATCCACAGCATTCTCCCATATTCAAAAAAACCACCTGGTCCTCCATCCGCGGTGTTTCCAGACCTCTCCTTCAAAACTCTCCATCGCTCCCAAAATCGCTTCCGGCGTCCCAAACTCTTCATCCTCCGGTGATCGATCACAGTCTTCAGTTATGGCTACGGCGTCAGTGGCTTTCAAATCGAGGGAGGACCATCGAAAGCAGATTGAATTGGAGGAAGCACGTAAAGCTGGGCTAGCACCAGCTGAAGTTGATGAAGATGGGAAAGAGATCAATCCTCATATTCCTCAGTATATGTCATCTGCTCCTTGGTATCTTAACGCTGAGAAGCCGAGCTTGAAACATCAAAGGAAATGGAAATCAGATCCAAATTATACAAAATCCTGGTATGATAGAGGTGCGAAGATATTTCGGGCTGATAAGTACCGGAAAGGAGCTTGTGAAAACTGTGGGGCCATGACACATAATGCAAAGTCCTGCATGGAGAGGCCTAGAAAGAAAGGAGCAAAATGGACTAGCATGCACATTGCACCTGATGAAAAGATAGAGATCTTCGAGCTGGATTATGATGGCAAAAGGGATAGATGGAATGGTTTTGATGCTGCAACTTATGCTCGTGTCATTGAGAGATATGAAGCAAGGGATGAGGCTAGAAGGAAGTACCTCAAAGAGCAGCAGCTGAAAAGGTTAGAGGAGAAAAATAGTAAGCAGAATGGAGAGGGGGAGGTCAGTGATGACGATGAGTATGAAGATGCTCTGAAGGTTGATGAGGCCAAGGTTGATGAAAGCAAACAAATGGATTTTGCAAAGGTTGAGAAGCGTGTTCGCACAACCGGTGGTGGAAGCACAGGAACTGTCAGAAATTTGCGTATTCGGGAGGACACAGCGAAGTATCTTTTAAACCTTGATGTCAACTCTGCTTATTATGATCCCAAAACTCGGTCCATGCGTGAAGATCCTCTTCCTGATGCTGACCCAAATGAGAAGTTTTATGCAGGAGATAACAAATACAGAGTGAGTGGGCAAGCTTTAGATTTCAAGCAGCTCAATATTCATGCATGGGAAGCATTTGAAAAAGGACAAGACATGCACATGCAAGCTGCTCCATCTCAAGCGGAATTGCTTTTTAAGAACTATAAGGTCATTAAGGAGAAGTTGAAGTCGAAAATGAAAGATGCCATTATGGAAAAGTACGGGAATGCTGCAACTGTAGAAGAACTTCCTAAGGAGCTTCTTTTTGGACAAACTGAGAAAGAAGTTGAATATGACCGTGCTGGAAGAGTTATAAAGGGCATGGAGACATCCTTGCCGAAAAGCAAGTATGAGGAGGATGTTTACATCAATAACCACACAAGTGTCTGGGGGTCATGGTGGAAGGATCACCAATGGGGCTACAAGTGTTGCAAGCAAACAATTCAGAACAGTTATTGCACTGGTGCAGCTGGAATTGAGGCATCTGAGTCAGCTGCCAACCTAATGAAGGCAAATATTGACTGCAAAGCAGCATCTGAAGAGACCTCCTCTCCAACAGAAGAGAAAAGGCTTGCTACTTGGGGAGCTGATATACCTGAAGACTTGGAGCTTGACCAGAAAAAACTTGGTGATGCTCTTAAGAAGGTTACTCCCGAGGAGATGGAGGCATATCGGATGAAAAAGGTACATCATGATGATCCGATGAAAGATTTTGTGCGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

Slu7

Protein Analysis

571

Amino Acids

65.37

Weight (kDa)

7.57

Isoelectric Point (pI)

45.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Slu7	PF11708	194 - 463	4.2e-95	Pre-mRNA splicing Prp18-interacting factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001496)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65660 AT3G45950 AT4G37120
fragaria_vesca	FvH4_2g21480 FvH4_4g03640 FvH4_5g13320
malus_domestica	MD05G1197300.v1.1 MD10G1184000.v1.1 MD16G1219100.v1.1
prunus_persica	Prupe.1G039500_v2.0.a1 Prupe.1G039500_v2.0.a1 Prupe.1G039500_v2.0.a1 Prupe.1G039500_v2.0.a1 Prupe.1G039500_v2.0.a1 Prupe.1G039500_v2.0.a1 Prupe.1G039500_v2.0.a1 Prupe.8G223800_v2.0.a1
pyrus_communis	pycom05g18440 pycom10g15930 pycom16g18260
rosa_chinensis	RchiOBHm_Chr4g0393021 RchiOBHm_Chr6g0288131 RchiOBHm_Chr7g0183821
rosa_laevigata	RLG00000005020 RLG00000009774
rosa_multiflora	Rmu_sc0003610.1_g000043 Rmu_sc0010766.1_g000006 Rmu_sc0034700.1_g000001
rosa_roxburghii	Rroxscaffold_3G00270180 Rroxscaffold_5G00338120 Rroxscaffold_7G00180470
rosa_rugosa	Rorug04G0002700 Rorug04G0002800 Rorug06G0194300 Rorug06G0460700 Rorug06G0460800
rosa_samantha	Rh4AG045400 Rh4BG041400 Rh4CG049000 Rh4DG043300 Rh6AG304700 Rh6BG310700 Rh6CG318800 Rh6DG303700 Rh7AG061400 Rh7BG061500 Rh7CG063100 Rh7DG061500
rosa_wichuraiana	Rw4G003580 Rw6G026360 Rw7G005100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1307
AccII	CGCG	1 cut(s)	73
AciI	CCGC	3 cut(s)	71, 73, 1136
AclWI	GGATC	5 cut(s)	380, 944, 971, 1407, 1685
AcsI	RAATTY	1 cut(s)	883
AcuI	CTGAAG	5 cut(s)	153, 288, 800, 1551, 1611
AcyI	GRCGYC	2 cut(s)	129, 185
AfaI	GTAC	4 cut(s)	446, 683, 1214, 1680
AfiI	CCNNNNNNNGG	2 cut(s)	960, 1501
AflII	CTTAAG	1 cut(s)	1631
AgeI	ACCGGT	1 cut(s)	854
AgsI	TTSAA	9 cut(s)	47, 96, 199, 230, 361, 1060, 1094, 1180, 1283
AjnI	CCWGG	2 cut(s)	57, 404
AleI	CACNNNNGTG	1 cut(s)	1374
Alw26I	GTCTC	2 cut(s)	1313, 1529
AlwI	GGATC	5 cut(s)	380, 944, 971, 1407, 1685
AlwNI	CAGNNNCTG	3 cut(s)	700, 875, 1529
Ama87I	CYCGRG	1 cut(s)	1646
AoxI	GGCC	3 cut(s)	474, 509, 792
ApeKI	GCWGC	9 cut(s)	623, 694, 697, 1063, 1121, 1223, 1460, 1487, 1523
ApoI	RAATTY	1 cut(s)	883
AsiGI	ACCGGT	1 cut(s)	854
Asp700I	GAANNNNTTC	1 cut(s)	1239
AspLEI	GCGC	1 cut(s)	1713
AspS9I	GGNCC	4 cut(s)	61, 211, 474, 963
AsuHPI	GGTGA	3 cut(s)	164, 1394, 1634
AsuNHI	GCTAGC	1 cut(s)	256
AvaI	CYCGRG	1 cut(s)	1646
AvaII	GGWCC	3 cut(s)	61, 211, 963
AxyI	CCTNAGG	1 cut(s)	1245
BarI	GAAGNNNNNNTAC	2 cut(s)	1224, 1256
BauI	CACGAG	1 cut(s)	636
BbsI	GAAGAC	2 cut(s)	159, 1599
BbvI	GCAGC	9 cut(s)	610, 706, 709, 1075, 1108, 1210, 1472, 1474, 1535
BccI	CCATC	8 cut(s)	75, 113, 222, 275, 584, 600, 1135, 1648
BceAI	ACGGC	1 cut(s)	198
BciT130I	CCWGG	2 cut(s)	59, 406
BcoDI	GTCTC	2 cut(s)	1313, 1529
BfaI	CTAG	6 cut(s)	17, 257, 513, 537, 672, 1714
BfmI	CTRYAG	1 cut(s)	1230
BfrI	CTTAAG	1 cut(s)	1631
BglII	AGATCT	1 cut(s)	570
BisI	GCNGC	9 cut(s)	624, 695, 698, 1064, 1122, 1224, 1461, 1488, 1524
BlsI	GCNGC	9 cut(s)	625, 696, 699, 1065, 1123, 1225, 1462, 1489, 1525
Bme1390I	CCNGG	2 cut(s)	59, 406
Bme18I	GGWCC	3 cut(s)	61, 211, 963
BmeT110I	CYCGRG	1 cut(s)	1646
BmgT120I	GGNCC	4 cut(s)	61, 211, 474, 963
BmiI	GGNNCC	1 cut(s)	475
BmrFI	CCNGG	2 cut(s)	59, 406
BmsI	GCATC	7 cut(s)	610, 763, 979, 1186, 1484, 1535, 1615
BmtI	GCTAGC	1 cut(s)	260
BpiI	GAAGAC	2 cut(s)	159, 1599
BplI	GAGNNNNNCTC	2 cut(s)	1526, 1558
BpuEI	CTTGAG	1 cut(s)	1116
Bsa29I	ATCGAT	1 cut(s)	157
BsaAI	YACGTR	1 cut(s)	245
BsaBI	GATNNNNATC	1 cut(s)	569
BsaHI	GRCGYC	2 cut(s)	129, 185
BsaI	GGTCTC	1 cut(s)	1529
BsaJI	CCNNGG	4 cut(s)	71, 329, 795, 1647
BsaWI	WCCGGW	3 cut(s)	149, 447, 854
BsaXI	ACNNNNNCTCC	2 cut(s)	1528, 1558
Bsc4I	CCNNNNNNNGG	2 cut(s)	960, 1501
Bse118I	RCCGGY	1 cut(s)	854
Bse1I	ACTGG	1 cut(s)	1459
Bse21I	CCTNAGG	1 cut(s)	1245
Bse3DI	GCAATG	1 cut(s)	546
Bse8I	GATNNNNATC	1 cut(s)	569
BseBI	CCWGG	2 cut(s)	59, 406
BseCI	ATCGAT	1 cut(s)	157
BseDI	CCNNGG	4 cut(s)	71, 329, 795, 1647
BseGI	GGATG	7 cut(s)	23, 67, 143, 670, 1322, 1357, 1674
BseJI	GATNNNNATC	1 cut(s)	569
BseLI	CCNNNNNNNGG	2 cut(s)	960, 1501
BseMI	GCAATG	1 cut(s)	546
BseMII	CTCAG	4 cut(s)	323, 336, 1260, 1470
BseNI	ACTGG	1 cut(s)	1459
BseRI	GAGGAG	4 cut(s)	728, 1361, 1531, 1664
BseXI	GCAGC	9 cut(s)	610, 706, 709, 1075, 1108, 1210, 1472, 1474, 1535
BseYI	CCCAGC	1 cut(s)	251
BsgI	GTGCAG	1 cut(s)	1479
Bsh1236I	CGCG	1 cut(s)	73
BshFI	GGCC	3 cut(s)	476, 511, 794
BshTI	ACCGGT	1 cut(s)	854
BshVI	ATCGAT	1 cut(s)	157
BsiHKCI	CYCGRG	1 cut(s)	1646
BsiSI	CCGG	4 cut(s)	126, 150, 448, 855
BslFI	GGGAC	1 cut(s)	116
BslI	CCNNNNNNNGG	2 cut(s)	960, 1501
BsmAI	GTCTC	2 cut(s)	1313, 1529
BsmFI	GGGAC	1 cut(s)	116
BsmI	GAATGC	2 cut(s)	32, 1225
BsnI	GGCC	3 cut(s)	476, 511, 794
Bso31I	GGTCTC	1 cut(s)	1529
BsoBI	CYCGRG	1 cut(s)	1646
Bsp143I	GATC	9 cut(s)	154, 158, 291, 385, 570, 949, 976, 1399, 1690
BspACI	CCGC	3 cut(s)	71, 73, 1136
BspANI	GGCC	3 cut(s)	476, 511, 794
BspCNI	CTCAG	4 cut(s)	322, 337, 1261, 1471
BspDI	ATCGAT	1 cut(s)	157
BspFNI	CGCG	1 cut(s)	73
BspHI	TCATGA	1 cut(s)	1684
BspLI	GGNNCC	1 cut(s)	475
BspOI	GCTAGC	1 cut(s)	260
BspPI	GGATC	5 cut(s)	380, 944, 971, 1407, 1685
BspTI	CTTAAG	1 cut(s)	1631
BspTNI	GGTCTC	1 cut(s)	1529
BsrDI	GCAATG	1 cut(s)	546
BsrFI	RCCGGY	1 cut(s)	854
BsrI	ACTGG	1 cut(s)	1459
BssAI	RCCGGY	1 cut(s)	854
BssECI	CCNNGG	4 cut(s)	71, 329, 795, 1647
BssMI	GATC	9 cut(s)	154, 158, 291, 385, 570, 949, 976, 1399, 1690
BssNI	GRCGYC	2 cut(s)	129, 185
BssSI	CACGAG	1 cut(s)	636
BssT1I	CCWWGG	2 cut(s)	329, 795
Bst2BI	CACGAG	1 cut(s)	636
Bst2UI	CCWGG	2 cut(s)	59, 406
Bst4CI	ACNGT	6 cut(s)	165, 470, 877, 1231, 1292, 1445
Bst6I	CTCTTC	5 cut(s)	145, 987, 1294, 1527, 1548
BstACI	GRCGYC	2 cut(s)	129, 185
BstAFI	CTTAAG	1 cut(s)	1631
BstAPI	GCANNNNNTGC	1 cut(s)	632
BstBAI	YACGTR	1 cut(s)	245
BstC8I	GCNNGC	6 cut(s)	258, 542, 1047, 1119, 1427, 1566
BstDEI	CTNAG	5 cut(s)	309, 345, 1245, 1269, 1479
BstDSI	CCRYGG	1 cut(s)	71
BstENI	CCTNNNNNAGG	1 cut(s)	1499
BstF5I	GGATG	7 cut(s)	23, 67, 143, 670, 1322, 1357, 1674
BstFNI	CGCG	1 cut(s)	73
BstHHI	GCGC	1 cut(s)	1713
BstKTI	GATC	9 cut(s)	157, 161, 294, 388, 573, 952, 979, 1402, 1693
BstMAI	GTCTC	2 cut(s)	1313, 1529
BstMBI	GATC	9 cut(s)	154, 158, 291, 385, 570, 949, 976, 1399, 1690
BstMWI	GCNNNNNNNGC	5 cut(s)	191, 248, 257, 632, 1085
BstNI	CCWGG	2 cut(s)	59, 406
BstNSI	RCATGY	3 cut(s)	544, 1111, 1117
BstSCI	CCNGG	2 cut(s)	57, 404
BstSFI	CTRYAG	1 cut(s)	1230
BstUI	CGCG	1 cut(s)	73
BstV1I	GCAGC	9 cut(s)	610, 706, 709, 1075, 1108, 1210, 1472, 1474, 1535
BstV2I	GAAGAC	2 cut(s)	159, 1599
BstX2I	RGATCY	3 cut(s)	385, 570, 976
BstYI	RGATCY	3 cut(s)	385, 570, 976
Bsu15I	ATCGAT	1 cut(s)	157
Bsu36I	CCTNAGG	1 cut(s)	1245
BsuRI	GGCC	3 cut(s)	476, 511, 794
BsuTUI	ATCGAT	1 cut(s)	157
BtgI	CCRYGG	1 cut(s)	71
BtgZI	GCGATG	1 cut(s)	91
BtsCI	GGATG	7 cut(s)	23, 67, 143, 670, 1322, 1357, 1674
BtsIMutI	CAGTG	3 cut(s)	195, 757, 1452
Cac8I	GCNNGC	6 cut(s)	258, 542, 1047, 1119, 1427, 1566
CaiI	CAGNNNCTG	3 cut(s)	700, 875, 1529
CciI	TCATGA	1 cut(s)	1684
CfoI	GCGC	1 cut(s)	1713
Cfr10I	RCCGGY	1 cut(s)	854
Cfr13I	GGNCC	4 cut(s)	61, 211, 474, 963
Cfr42I	CCGCGG	1 cut(s)	74
ClaI	ATCGAT	1 cut(s)	157
CseI	GACGC	2 cut(s)	118, 174
CsiI	ACCWGGT	1 cut(s)	57
Csp6I	GTAC	4 cut(s)	445, 682, 1213, 1679
CspAI	ACCGGT	1 cut(s)	854
CviQI	GTAC	4 cut(s)	445, 682, 1213, 1679
DdeI	CTNAG	5 cut(s)	309, 345, 1245, 1269, 1479
DpnI	GATC	9 cut(s)	156, 160, 293, 387, 572, 951, 978, 1401, 1692
DpnII	GATC	9 cut(s)	154, 158, 291, 385, 570, 949, 976, 1399, 1690
DraI	TTTAAA	1 cut(s)	921
Eam1104I	CTCTTC	5 cut(s)	145, 987, 1294, 1527, 1548
EarI	CTCTTC	5 cut(s)	145, 987, 1294, 1527, 1548
Eco130I	CCWWGG	2 cut(s)	329, 795
Eco147I	AGGCCT	1 cut(s)	511
Eco31I	GGTCTC	1 cut(s)	1529
Eco47I	GGWCC	3 cut(s)	61, 211, 963
Eco57I	CTGAAG	5 cut(s)	153, 288, 800, 1551, 1611
Eco81I	CCTNAGG	1 cut(s)	1245
Eco88I	CYCGRG	1 cut(s)	1646
EcoNI	CCTNNNNNAGG	1 cut(s)	1499
EcoRII	CCWGG	2 cut(s)	57, 404
EcoT14I	CCWWGG	2 cut(s)	329, 795
EcoT22I	ATGCAT	1 cut(s)	1081
ErhI	CCWWGG	2 cut(s)	329, 795
FalI	AAGNNNNNCTT	4 cut(s)	341, 373, 966, 998
FaqI	GGGAC	1 cut(s)	116
Fnu4HI	GCNGC	9 cut(s)	624, 695, 698, 1064, 1122, 1224, 1461, 1488, 1524
FokI	GGATG	7 cut(s)	10, 54, 130, 677, 1309, 1364, 1681
Fsp4HI	GCNGC	9 cut(s)	624, 695, 698, 1064, 1122, 1224, 1461, 1488, 1524
FspBI	CTAG	6 cut(s)	17, 257, 513, 537, 672, 1714
GlaI	GCGC	1 cut(s)	1712
GluI	GCNGC	9 cut(s)	624, 695, 698, 1064, 1122, 1224, 1461, 1488, 1524
GsaI	CCCAGC	1 cut(s)	255
HaeIII	GGCC	3 cut(s)	476, 511, 794
HapII	CCGG	4 cut(s)	126, 150, 448, 855
HgaI	GACGC	2 cut(s)	118, 174
HhaI	GCGC	1 cut(s)	1713
Hin1I	GRCGYC	2 cut(s)	129, 185
Hin6I	GCGC	1 cut(s)	1711
HinP1I	GCGC	1 cut(s)	1711
HincII	GTYRAC	1 cut(s)	934
HindII	GTYRAC	1 cut(s)	934
HindIII	AAGCTT	1 cut(s)	1047
HinfI	GANTC	2 cut(s)	4, 1481
HpaII	CCGG	4 cut(s)	126, 150, 448, 855
HphI	GGTGA	3 cut(s)	164, 1394, 1634
Hpy166II	GTNNAC	2 cut(s)	934, 1357
Hpy188I	TCNGA	8 cut(s)	385, 780, 881, 1440, 1480, 1531, 1668, 1695
Hpy188III	TCNNGA	6 cut(s)	17, 82, 896, 986, 1646, 1685
Hpy8I	GTNNAC	2 cut(s)	934, 1357
Hpy99I	CGWCG	1 cut(s)	15
HpyAV	CCTTC	6 cut(s)	102, 669, 775, 1390, 1495, 1630
HpyCH4III	ACNGT	6 cut(s)	165, 470, 877, 1231, 1292, 1445
HpyCH4IV	ACGT	1 cut(s)	244
HpyF10VI	GCNNNNNNNGC	5 cut(s)	191, 248, 257, 632, 1085
HpyF3I	CTNAG	5 cut(s)	309, 345, 1245, 1269, 1479
HpySE526I	ACGT	1 cut(s)	244
Hsp92I	GRCGYC	2 cut(s)	129, 185
HspAI	GCGC	1 cut(s)	1711
KspI	CCGCGG	1 cut(s)	74
Kzo9I	GATC	9 cut(s)	154, 158, 291, 385, 570, 949, 976, 1399, 1690
LmnI	GCTCC	8 cut(s)	115, 331, 455, 524, 1129, 1249, 1577, 1600
Lsp1109I	GCAGC	9 cut(s)	610, 706, 709, 1075, 1108, 1210, 1472, 1474, 1535
LweI	GCATC	7 cut(s)	610, 763, 979, 1186, 1484, 1535, 1615
MabI	ACCWGGT	1 cut(s)	57
MaeI	CTAG	6 cut(s)	17, 257, 513, 537, 672, 1714
MaeII	ACGT	1 cut(s)	244
MaeIII	GTNAC	1 cut(s)	1639
MalI	GATC	9 cut(s)	156, 160, 293, 387, 572, 951, 978, 1401, 1692
MboI	GATC	9 cut(s)	154, 158, 291, 385, 570, 949, 976, 1399, 1690
MflI	RGATCY	3 cut(s)	385, 570, 976
MluCI	AATT	6 cut(s)	230, 391, 883, 1139, 1434, 1467
MlyI	GAGTC	1 cut(s)	1490
MmeI	TCCRAC	1 cut(s)	1571
Mph1103I	ATGCAT	1 cut(s)	1081
MroXI	GAANNNNTTC	1 cut(s)	1239
MseI	TTAA	5 cut(s)	339, 920, 1149, 1167, 1632
MslI	CAYNNNNRTG	3 cut(s)	1112, 1374, 1686
MspA1I	CMGCKG	5 cut(s)	73, 266, 700, 1463, 1487
MspCI	CTTAAG	1 cut(s)	1631
MspI	CCGG	4 cut(s)	126, 150, 448, 855
MspR9I	CCNGG	2 cut(s)	59, 406
Mva1269I	GAATGC	2 cut(s)	32, 1225
MvaI	CCWGG	2 cut(s)	59, 406
MvnI	CGCG	1 cut(s)	73
MwoI	GCNNNNNNNGC	5 cut(s)	191, 248, 257, 632, 1085
NdeII	GATC	9 cut(s)	154, 158, 291, 385, 570, 949, 976, 1399, 1690
NheI	GCTAGC	1 cut(s)	256
NlaIV	GGNNCC	1 cut(s)	475
NmeAIII	GCCGAG	1 cut(s)	378
NsiI	ATGCAT	1 cut(s)	1081
NspI	RCATGY	3 cut(s)	544, 1111, 1117
OliI	CACNNNNGTG	1 cut(s)	1374
PaeI	GCATGC	1 cut(s)	544
PagI	TCATGA	1 cut(s)	1684
PceI	AGGCCT	1 cut(s)	511
PcsI	WCGNNNNNNNCGW	2 cut(s)	126, 967
PctI	GAATGC	2 cut(s)	32, 1225
PdmI	GAANNNNTTC	1 cut(s)	1239
PfeI	GAWTC	1 cut(s)	4
PinAI	ACCGGT	1 cut(s)	854
PkrI	GCNGC	9 cut(s)	625, 696, 699, 1065, 1123, 1225, 1462, 1489, 1525
PleI	GAGTC	1 cut(s)	1489
PpsI	GAGTC	1 cut(s)	1489
Ppu21I	YACGTR	1 cut(s)	245
PsiI	TTATAA	1 cut(s)	1307
Psp6I	CCWGG	2 cut(s)	57, 404
PspFI	CCCAGC	1 cut(s)	251
PspGI	CCWGG	2 cut(s)	57, 404
PspN4I	GGNNCC	1 cut(s)	475
PspPI	GGNCC	4 cut(s)	61, 211, 474, 963
PstNI	CAGNNNCTG	3 cut(s)	700, 875, 1529
PsuI	RGATCY	3 cut(s)	385, 570, 976
PvuII	CAGCTG	4 cut(s)	266, 700, 1463, 1487
RsaI	GTAC	4 cut(s)	446, 683, 1214, 1680
RsaNI	GTAC	4 cut(s)	445, 682, 1213, 1679
RseI	CAYNNNNRTG	3 cut(s)	1112, 1374, 1686
SacII	CCGCGG	1 cut(s)	74
SaqAI	TTAA	5 cut(s)	339, 920, 1149, 1167, 1632
SatI	GCNGC	9 cut(s)	624, 695, 698, 1064, 1122, 1224, 1461, 1488, 1524
Sau3AI	GATC	9 cut(s)	154, 158, 291, 385, 570, 949, 976, 1399, 1690
Sau96I	GGNCC	4 cut(s)	61, 211, 474, 963
SchI	GAGTC	1 cut(s)	1490
ScrFI	CCNGG	2 cut(s)	59, 406
SexAI	ACCWGGT	1 cut(s)	57
SfaNI	GCATC	7 cut(s)	610, 763, 979, 1186, 1484, 1535, 1615
SfcI	CTRYAG	1 cut(s)	1230
Sfr303I	CCGCGG	1 cut(s)	74
SgrBI	CCGCGG	1 cut(s)	74
SinI	GGWCC	3 cut(s)	61, 211, 963
SmiMI	CAYNNNNRTG	3 cut(s)	1112, 1374, 1686
SmlI	CTYRAG	2 cut(s)	1131, 1631
SmoI	CTYRAG	2 cut(s)	1131, 1631
SphI	GCATGC	1 cut(s)	544
Sse9I	AATT	6 cut(s)	230, 391, 883, 1139, 1434, 1467
SseBI	AGGCCT	1 cut(s)	511
SsiI	CCGC	3 cut(s)	71, 73, 1136
SspI	AATATT	2 cut(s)	1072, 1510
SspMI	CTAG	6 cut(s)	17, 257, 513, 537, 672, 1714
StuI	AGGCCT	1 cut(s)	511
StyD4I	CCNGG	2 cut(s)	57, 404
StyI	CCWWGG	2 cut(s)	329, 795
TaaI	ACNGT	6 cut(s)	165, 470, 877, 1231, 1292, 1445
TaiI	ACGT	1 cut(s)	247
TaqI	TCGA	5 cut(s)	157, 203, 217, 576, 1184
TaqII	GACCGA	1 cut(s)	951
TasI	AATT	6 cut(s)	230, 391, 883, 1139, 1434, 1467
TfiI	GAWTC	1 cut(s)	4
Tru1I	TTAA	5 cut(s)	339, 920, 1149, 1167, 1632
Tru9I	TTAA	5 cut(s)	339, 920, 1149, 1167, 1632
TscAI	CASTG	3 cut(s)	195, 757, 1459
TseI	GCWGC	9 cut(s)	623, 694, 697, 1063, 1121, 1223, 1460, 1487, 1523
TspRI	CASTG	3 cut(s)	195, 757, 1459
Vha464I	CTTAAG	1 cut(s)	1631
VpaK11BI	GGWCC	3 cut(s)	61, 211, 963
XagI	CCTNNNNNAGG	1 cut(s)	1499
XapI	RAATTY	1 cut(s)	883
XbaI	TCTAGA	1 cut(s)	16
XceI	RCATGY	3 cut(s)	544, 1111, 1117
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1616
XmnI	GAANNNNTTC	1 cut(s)	1239
XspI	CTAG	6 cut(s)	17, 257, 513, 537, 672, 1714
Zsp2I	ATGCAT	1 cut(s)	1081

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.