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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g04690 |
| rosa_chinensis | RchiOBHm_Chr1g0384141 |
| rosa_laevigata | RLG00000026068 |
| rosa_multiflora | Rmu_sc0005139.1_g000009 Rmu_sc0005139.1_g000011 Rmu_sc0005139.1_g000012 Rmu_sc0005139.1_g000014 Rmu_sc0005139.1_g000015 Rmu_sc0014419.1_g000002 Rmu_sc0014419.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00276890 Rroxscaffold_4G00276900 Rroxscaffold_4G00276920 Rroxscaffold_4G00276950 Rroxscaffold_6G00397390 |
| rosa_rugosa | Rorug01G0445100 Rorug01G0445200 Rorug01G0445200 Rorug01G0445300 |
| rosa_samantha | Rh1AG470700 Rh1AG470800 Rh1BG428100 Rh1BG428200 Rh1BG428300 Rh1BG428400 Rh1CG440800 Rh1CG441000 Rh1CG441100 Rh1DG461100 Rh1DG461200 |
| rosa_wichuraiana | Rw1G040180 Rw1G040190 Rw1G040200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 18 |
| AciI | CCGC | 1 cut(s) | 482 |
| AclWI | GGATC | 2 cut(s) | 105, 554 |
| AcsI | RAATTY | 3 cut(s) | 37, 419, 431 |
| AfaI | GTAC | 3 cut(s) | 226, 235, 520 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 258 |
| AgsI | TTSAA | 6 cut(s) | 88, 158, 184, 314, 393, 425 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 417, 449 |
| AluBI | AGCT | 1 cut(s) | 451 |
| AluI | AGCT | 1 cut(s) | 451 |
| Alw26I | GTCTC | 1 cut(s) | 328 |
| AlwI | GGATC | 2 cut(s) | 105, 554 |
| Ama87I | CYCGRG | 1 cut(s) | 325 |
| AoxI | GGCC | 1 cut(s) | 166 |
| ApeKI | GCWGC | 1 cut(s) | 479 |
| ApoI | RAATTY | 3 cut(s) | 37, 419, 431 |
| AsuC2I | CCSGG | 1 cut(s) | 508 |
| AvaI | CYCGRG | 1 cut(s) | 325 |
| BbsI | GAAGAC | 1 cut(s) | 579 |
| BbvI | GCAGC | 1 cut(s) | 491 |
| BccI | CCATC | 1 cut(s) | 362 |
| BcnI | CCSGG | 1 cut(s) | 508 |
| BcoDI | GTCTC | 1 cut(s) | 328 |
| BfmI | CTRYAG | 1 cut(s) | 337 |
| BisI | GCNGC | 1 cut(s) | 480 |
| BlsI | GCNGC | 1 cut(s) | 481 |
| Bme1390I | CCNGG | 1 cut(s) | 508 |
| BmeT110I | CYCGRG | 1 cut(s) | 325 |
| BmrFI | CCNGG | 1 cut(s) | 508 |
| BmrI | ACTGGG | 1 cut(s) | 196 |
| BmuI | ACTGGG | 1 cut(s) | 196 |
| BpiI | GAAGAC | 1 cut(s) | 579 |
| BpuMI | CCSGG | 1 cut(s) | 508 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 258 |
| Bse1I | ACTGG | 1 cut(s) | 191 |
| BseGI | GGATG | 2 cut(s) | 196, 388 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 258 |
| BseNI | ACTGG | 1 cut(s) | 191 |
| BseXI | GCAGC | 1 cut(s) | 491 |
| Bsh1236I | CGCG | 1 cut(s) | 18 |
| BshFI | GGCC | 1 cut(s) | 168 |
| BsiHKCI | CYCGRG | 1 cut(s) | 325 |
| BsiSI | CCGG | 1 cut(s) | 507 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 258 |
| BsmAI | GTCTC | 1 cut(s) | 328 |
| BsmBI | CGTCTC | 1 cut(s) | 328 |
| BsnI | GGCC | 1 cut(s) | 168 |
| BsoBI | CYCGRG | 1 cut(s) | 325 |
| Bsp143I | GATC | 3 cut(s) | 48, 97, 559 |
| BspACI | CCGC | 1 cut(s) | 482 |
| BspANI | GGCC | 1 cut(s) | 168 |
| BspFNI | CGCG | 1 cut(s) | 18 |
| BspHI | TCATGA | 2 cut(s) | 403, 583 |
| BspPI | GGATC | 2 cut(s) | 105, 554 |
| BsrI | ACTGG | 1 cut(s) | 191 |
| BssMI | GATC | 3 cut(s) | 48, 97, 559 |
| Bst4CI | ACNGT | 5 cut(s) | 26, 79, 151, 208, 523 |
| Bst6I | CTCTTC | 1 cut(s) | 105 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 256 |
| BstF5I | GGATG | 2 cut(s) | 196, 388 |
| BstFNI | CGCG | 1 cut(s) | 18 |
| BstKTI | GATC | 3 cut(s) | 51, 100, 562 |
| BstMAI | GTCTC | 1 cut(s) | 328 |
| BstMBI | GATC | 3 cut(s) | 48, 97, 559 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 174 |
| BstNSI | RCATGY | 1 cut(s) | 291 |
| BstSCI | CCNGG | 1 cut(s) | 506 |
| BstSFI | CTRYAG | 1 cut(s) | 337 |
| BstUI | CGCG | 1 cut(s) | 18 |
| BstV1I | GCAGC | 1 cut(s) | 491 |
| BstV2I | GAAGAC | 1 cut(s) | 579 |
| BstX2I | RGATCY | 1 cut(s) | 97 |
| BstYI | RGATCY | 1 cut(s) | 97 |
| BsuRI | GGCC | 1 cut(s) | 168 |
| BtgZI | GCGATG | 1 cut(s) | 570 |
| BtsCI | GGATG | 2 cut(s) | 196, 388 |
| BtsIMutI | CAGTG | 3 cut(s) | 217, 300, 528 |
| CciI | TCATGA | 2 cut(s) | 403, 583 |
| Csp6I | GTAC | 3 cut(s) | 225, 234, 519 |
| CviAII | CATG | 8 cut(s) | 164, 174, 245, 288, 349, 373, 404, 584 |
| CviJI | RGCY | 4 cut(s) | 168, 330, 451, 506 |
| CviKI_1 | RGCY | 4 cut(s) | 168, 330, 451, 506 |
| CviQI | GTAC | 3 cut(s) | 225, 234, 519 |
| DpnI | GATC | 3 cut(s) | 50, 99, 561 |
| DpnII | GATC | 3 cut(s) | 48, 97, 559 |
| Eam1104I | CTCTTC | 1 cut(s) | 105 |
| EarI | CTCTTC | 1 cut(s) | 105 |
| Eco88I | CYCGRG | 1 cut(s) | 325 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 256 |
| Esp3I | CGTCTC | 1 cut(s) | 328 |
| FaeI | CATG | 8 cut(s) | 167, 177, 248, 291, 352, 376, 407, 587 |
| FatI | CATG | 8 cut(s) | 163, 173, 244, 287, 348, 372, 403, 583 |
| Fnu4HI | GCNGC | 1 cut(s) | 480 |
| FokI | GGATG | 2 cut(s) | 203, 395 |
| Fsp4HI | GCNGC | 1 cut(s) | 480 |
| GluI | GCNGC | 1 cut(s) | 480 |
| HaeIII | GGCC | 1 cut(s) | 168 |
| HapII | CCGG | 1 cut(s) | 507 |
| Hin1II | CATG | 8 cut(s) | 167, 177, 248, 291, 352, 376, 407, 587 |
| HincII | GTYRAC | 1 cut(s) | 513 |
| HindII | GTYRAC | 1 cut(s) | 513 |
| HinfI | GANTC | 5 cut(s) | 68, 115, 158, 294, 529 |
| HpaII | CCGG | 1 cut(s) | 507 |
| Hpy166II | GTNNAC | 2 cut(s) | 293, 513 |
| Hpy188I | TCNGA | 3 cut(s) | 73, 359, 499 |
| Hpy188III | TCNNGA | 5 cut(s) | 88, 130, 404, 473, 584 |
| Hpy8I | GTNNAC | 2 cut(s) | 293, 513 |
| HpyCH4III | ACNGT | 5 cut(s) | 26, 79, 151, 208, 523 |
| HpyCH4IV | ACGT | 2 cut(s) | 223, 232 |
| HpyCH4V | TGCA | 3 cut(s) | 105, 177, 215 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 174 |
| HpySE526I | ACGT | 2 cut(s) | 223, 232 |
| Hsp92II | CATG | 8 cut(s) | 167, 177, 248, 291, 352, 376, 407, 587 |
| Kzo9I | GATC | 3 cut(s) | 48, 97, 559 |
| LpnPI | CCDG | 9 cut(s) | 29, 80, 115, 172, 244, 269, 378, 469, 520 |
| Lsp1109I | GCAGC | 1 cut(s) | 491 |
| MaeII | ACGT | 2 cut(s) | 223, 232 |
| MalI | GATC | 3 cut(s) | 50, 99, 561 |
| MboI | GATC | 3 cut(s) | 48, 97, 559 |
| MboII | GAAGA | 3 cut(s) | 122, 145, 584 |
| MflI | RGATCY | 1 cut(s) | 97 |
| MluCI | AATT | 6 cut(s) | 37, 179, 419, 431, 549, 587 |
| MlyI | GAGTC | 1 cut(s) | 288 |
| MnlI | CCTC | 5 cut(s) | 133, 187, 373, 453, 519 |
| MseI | TTAA | 2 cut(s) | 267, 607 |
| MslI | CAYNNNNRTG | 1 cut(s) | 582 |
| MspA1I | CMGCKG | 1 cut(s) | 482 |
| MspI | CCGG | 1 cut(s) | 507 |
| MspR9I | CCNGG | 1 cut(s) | 508 |
| MvnI | CGCG | 1 cut(s) | 18 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 174 |
| NciI | CCSGG | 1 cut(s) | 508 |
| NdeII | GATC | 3 cut(s) | 48, 97, 559 |
| NlaIII | CATG | 8 cut(s) | 167, 177, 248, 291, 352, 376, 407, 587 |
| NmeAIII | GCCGAG | 1 cut(s) | 276 |
| NspI | RCATGY | 1 cut(s) | 291 |
| PagI | TCATGA | 2 cut(s) | 403, 583 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 229, 495 |
| PfeI | GAWTC | 4 cut(s) | 68, 115, 158, 529 |
| PkrI | GCNGC | 1 cut(s) | 481 |
| PleI | GAGTC | 1 cut(s) | 288 |
| PpsI | GAGTC | 1 cut(s) | 288 |
| PsuI | RGATCY | 1 cut(s) | 97 |
| RsaI | GTAC | 3 cut(s) | 226, 235, 520 |
| RsaNI | GTAC | 3 cut(s) | 225, 234, 519 |
| RseI | CAYNNNNRTG | 1 cut(s) | 582 |
| SaqAI | TTAA | 2 cut(s) | 267, 607 |
| SatI | GCNGC | 1 cut(s) | 480 |
| Sau3AI | GATC | 3 cut(s) | 48, 97, 559 |
| SchI | GAGTC | 1 cut(s) | 288 |
| ScrFI | CCNGG | 1 cut(s) | 508 |
| SetI | ASST | 6 cut(s) | 144, 226, 235, 254, 445, 453 |
| SfcI | CTRYAG | 1 cut(s) | 337 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 582 |
| Sse9I | AATT | 6 cut(s) | 37, 179, 419, 431, 549, 587 |
| SsiI | CCGC | 1 cut(s) | 482 |
| StyD4I | CCNGG | 1 cut(s) | 506 |
| TaaI | ACNGT | 5 cut(s) | 26, 79, 151, 208, 523 |
| TaiI | ACGT | 2 cut(s) | 226, 235 |
| TaqI | TCGA | 2 cut(s) | 51, 445 |
| TasI | AATT | 6 cut(s) | 37, 179, 419, 431, 549, 587 |
| TatI | WGTACW | 1 cut(s) | 518 |
| TfiI | GAWTC | 4 cut(s) | 68, 115, 158, 529 |
| Tru1I | TTAA | 2 cut(s) | 267, 607 |
| Tru9I | TTAA | 2 cut(s) | 267, 607 |
| TscAI | CASTG | 3 cut(s) | 217, 307, 528 |
| TseI | GCWGC | 1 cut(s) | 479 |
| TspDTI | ATGAA | 5 cut(s) | 162, 400, 572, 585, 600 |
| TspRI | CASTG | 3 cut(s) | 217, 307, 528 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 256 |
| XapI | RAATTY | 3 cut(s) | 37, 419, 431 |
| XceI | RCATGY | 1 cut(s) | 291 |