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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g04690 |
| rosa_chinensis | RchiOBHm_Chr1g0384141 |
| rosa_laevigata | RLG00000026068 |
| rosa_multiflora | Rmu_sc0005139.1_g000009 Rmu_sc0005139.1_g000011 Rmu_sc0005139.1_g000012 Rmu_sc0005139.1_g000014 Rmu_sc0005139.1_g000015 Rmu_sc0014419.1_g000002 Rmu_sc0014419.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00276890 Rroxscaffold_4G00276900 Rroxscaffold_4G00276920 Rroxscaffold_4G00276950 Rroxscaffold_6G00397390 |
| rosa_rugosa | Rorug01G0445100 Rorug01G0445200 Rorug01G0445200 Rorug01G0445300 |
| rosa_samantha | Rh1AG470700 Rh1AG470800 Rh1BG428100 Rh1BG428200 Rh1BG428300 Rh1BG428400 Rh1CG440800 Rh1CG441000 Rh1CG441100 Rh1DG461100 Rh1DG461200 |
| rosa_wichuraiana | Rw1G040180 Rw1G040190 Rw1G040200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 350 |
| AatII | GACGTC | 1 cut(s) | 339 |
| AclWI | GGATC | 1 cut(s) | 557 |
| AcsI | RAATTY | 3 cut(s) | 40, 422, 434 |
| AcuI | CTGAAG | 1 cut(s) | 240 |
| AcyI | GRCGYC | 1 cut(s) | 336 |
| AfaI | GTAC | 2 cut(s) | 217, 523 |
| AgsI | TTSAA | 7 cut(s) | 79, 149, 175, 236, 305, 396, 428 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 420, 452 |
| AluBI | AGCT | 2 cut(s) | 454, 485 |
| AluI | AGCT | 2 cut(s) | 454, 485 |
| Alw26I | GTCTC | 3 cut(s) | 95, 290, 319 |
| AlwI | GGATC | 1 cut(s) | 557 |
| AoxI | GGCC | 1 cut(s) | 157 |
| ApeKI | GCWGC | 1 cut(s) | 482 |
| ApoI | RAATTY | 3 cut(s) | 40, 422, 434 |
| AsuC2I | CCSGG | 1 cut(s) | 511 |
| AsuHPI | GGTGA | 1 cut(s) | 398 |
| BbsI | GAAGAC | 2 cut(s) | 221, 582 |
| BbvI | GCAGC | 1 cut(s) | 494 |
| BccI | CCATC | 2 cut(s) | 233, 353 |
| BcnI | CCSGG | 1 cut(s) | 511 |
| BcoDI | GTCTC | 3 cut(s) | 95, 290, 319 |
| BfmI | CTRYAG | 1 cut(s) | 328 |
| BisI | GCNGC | 1 cut(s) | 483 |
| BlsI | GCNGC | 1 cut(s) | 484 |
| Bme1390I | CCNGG | 1 cut(s) | 511 |
| BmrFI | CCNGG | 1 cut(s) | 511 |
| BmrI | ACTGGG | 1 cut(s) | 187 |
| BmuI | ACTGGG | 1 cut(s) | 187 |
| BpiI | GAAGAC | 2 cut(s) | 221, 582 |
| BpuMI | CCSGG | 1 cut(s) | 511 |
| BsaHI | GRCGYC | 1 cut(s) | 336 |
| BsaI | GGTCTC | 2 cut(s) | 95, 290 |
| Bse1I | ACTGG | 1 cut(s) | 182 |
| BseGI | GGATG | 1 cut(s) | 187 |
| BseNI | ACTGG | 1 cut(s) | 182 |
| BseXI | GCAGC | 1 cut(s) | 494 |
| BshFI | GGCC | 1 cut(s) | 159 |
| BsiSI | CCGG | 2 cut(s) | 318, 510 |
| BsmAI | GTCTC | 3 cut(s) | 95, 290, 319 |
| BsmBI | CGTCTC | 1 cut(s) | 319 |
| BsnI | GGCC | 1 cut(s) | 159 |
| Bso31I | GGTCTC | 2 cut(s) | 95, 290 |
| Bsp143I | GATC | 1 cut(s) | 562 |
| BspANI | GGCC | 1 cut(s) | 159 |
| BspHI | TCATGA | 2 cut(s) | 339, 586 |
| BspPI | GGATC | 1 cut(s) | 557 |
| BspTNI | GGTCTC | 2 cut(s) | 95, 290 |
| BsrI | ACTGG | 1 cut(s) | 182 |
| BssMI | GATC | 1 cut(s) | 562 |
| BssNI | GRCGYC | 1 cut(s) | 336 |
| Bst4CI | ACNGT | 3 cut(s) | 142, 199, 526 |
| Bst6I | CTCTTC | 1 cut(s) | 96 |
| BstACI | GRCGYC | 1 cut(s) | 336 |
| BstF5I | GGATG | 1 cut(s) | 187 |
| BstKTI | GATC | 1 cut(s) | 565 |
| BstMAI | GTCTC | 3 cut(s) | 95, 290, 319 |
| BstMBI | GATC | 1 cut(s) | 562 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 27, 165 |
| BstNSI | RCATGY | 1 cut(s) | 282 |
| BstSCI | CCNGG | 1 cut(s) | 509 |
| BstSFI | CTRYAG | 1 cut(s) | 328 |
| BstV1I | GCAGC | 1 cut(s) | 494 |
| BstV2I | GAAGAC | 2 cut(s) | 221, 582 |
| BsuRI | GGCC | 1 cut(s) | 159 |
| BtgZI | GCGATG | 1 cut(s) | 573 |
| BtsCI | GGATG | 1 cut(s) | 187 |
| BtsI | GCAGTG | 2 cut(s) | 201, 328 |
| BtsIMutI | CAGTG | 4 cut(s) | 201, 291, 328, 531 |
| CciI | TCATGA | 2 cut(s) | 339, 586 |
| Csp6I | GTAC | 2 cut(s) | 216, 522 |
| CviAII | CATG | 7 cut(s) | 31, 155, 165, 279, 340, 364, 587 |
| CviJI | RGCY | 5 cut(s) | 159, 243, 454, 485, 509 |
| CviKI_1 | RGCY | 5 cut(s) | 159, 243, 454, 485, 509 |
| CviQI | GTAC | 2 cut(s) | 216, 522 |
| DpnI | GATC | 1 cut(s) | 564 |
| DpnII | GATC | 1 cut(s) | 562 |
| Eam1104I | CTCTTC | 1 cut(s) | 96 |
| EarI | CTCTTC | 1 cut(s) | 96 |
| Eco31I | GGTCTC | 2 cut(s) | 95, 290 |
| Eco57I | CTGAAG | 1 cut(s) | 240 |
| Esp3I | CGTCTC | 1 cut(s) | 319 |
| FaeI | CATG | 7 cut(s) | 34, 158, 168, 282, 343, 367, 590 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 213, 245 |
| FatI | CATG | 7 cut(s) | 30, 154, 164, 278, 339, 363, 586 |
| Fnu4HI | GCNGC | 1 cut(s) | 483 |
| FokI | GGATG | 1 cut(s) | 194 |
| Fsp4HI | GCNGC | 1 cut(s) | 483 |
| GluI | GCNGC | 1 cut(s) | 483 |
| HaeIII | GGCC | 1 cut(s) | 159 |
| HapII | CCGG | 2 cut(s) | 318, 510 |
| Hin1I | GRCGYC | 1 cut(s) | 336 |
| Hin1II | CATG | 7 cut(s) | 34, 158, 168, 282, 343, 367, 590 |
| HincII | GTYRAC | 1 cut(s) | 516 |
| HindII | GTYRAC | 1 cut(s) | 516 |
| HinfI | GANTC | 4 cut(s) | 59, 106, 149, 532 |
| HpaII | CCGG | 2 cut(s) | 318, 510 |
| HphI | GGTGA | 1 cut(s) | 398 |
| Hpy166II | GTNNAC | 1 cut(s) | 516 |
| Hpy188I | TCNGA | 3 cut(s) | 64, 111, 502 |
| Hpy188III | TCNNGA | 5 cut(s) | 79, 236, 340, 476, 587 |
| Hpy8I | GTNNAC | 1 cut(s) | 516 |
| HpyAV | CCTTC | 1 cut(s) | 215 |
| HpyCH4III | ACNGT | 3 cut(s) | 142, 199, 526 |
| HpyCH4IV | ACGT | 2 cut(s) | 214, 336 |
| HpyCH4V | TGCA | 2 cut(s) | 96, 206 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 27, 165 |
| HpySE526I | ACGT | 2 cut(s) | 214, 336 |
| Hsp92I | GRCGYC | 1 cut(s) | 336 |
| Hsp92II | CATG | 7 cut(s) | 34, 158, 168, 282, 343, 367, 590 |
| Kzo9I | GATC | 1 cut(s) | 562 |
| LpnPI | CCDG | 9 cut(s) | 32, 71, 163, 235, 260, 331, 369, 472, 523 |
| Lsp1109I | GCAGC | 1 cut(s) | 494 |
| MaeII | ACGT | 2 cut(s) | 214, 336 |
| MaeIII | GTNAC | 2 cut(s) | 199, 332 |
| MalI | GATC | 1 cut(s) | 564 |
| MboI | GATC | 1 cut(s) | 562 |
| MboII | GAAGA | 5 cut(s) | 113, 136, 221, 224, 587 |
| MluCI | AATT | 5 cut(s) | 40, 170, 422, 434, 590 |
| MnlI | CCTC | 3 cut(s) | 124, 456, 522 |
| MseI | TTAA | 1 cut(s) | 258 |
| MslI | CAYNNNNRTG | 1 cut(s) | 585 |
| MspA1I | CMGCKG | 1 cut(s) | 485 |
| MspI | CCGG | 2 cut(s) | 318, 510 |
| MspR9I | CCNGG | 1 cut(s) | 511 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 27, 165 |
| NciI | CCSGG | 1 cut(s) | 511 |
| NdeII | GATC | 1 cut(s) | 562 |
| NlaIII | CATG | 7 cut(s) | 34, 158, 168, 282, 343, 367, 590 |
| NmeAIII | GCCGAG | 1 cut(s) | 267 |
| NmuCI | GTSAC | 2 cut(s) | 199, 332 |
| NspI | RCATGY | 1 cut(s) | 282 |
| PagI | TCATGA | 2 cut(s) | 339, 586 |
| PfeI | GAWTC | 4 cut(s) | 59, 106, 149, 532 |
| PkrI | GCNGC | 1 cut(s) | 484 |
| PsiI | TTATAA | 1 cut(s) | 350 |
| PvuII | CAGCTG | 1 cut(s) | 485 |
| RsaI | GTAC | 2 cut(s) | 217, 523 |
| RsaNI | GTAC | 2 cut(s) | 216, 522 |
| RseI | CAYNNNNRTG | 1 cut(s) | 585 |
| SaqAI | TTAA | 1 cut(s) | 258 |
| SatI | GCNGC | 1 cut(s) | 483 |
| Sau3AI | GATC | 1 cut(s) | 562 |
| ScrFI | CCNGG | 1 cut(s) | 511 |
| SetI | ASST | 7 cut(s) | 135, 217, 226, 339, 448, 456, 487 |
| SfcI | CTRYAG | 1 cut(s) | 328 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 585 |
| Sse9I | AATT | 5 cut(s) | 40, 170, 422, 434, 590 |
| SspI | AATATT | 1 cut(s) | 346 |
| StyD4I | CCNGG | 1 cut(s) | 509 |
| TaaI | ACNGT | 3 cut(s) | 142, 199, 526 |
| TaiI | ACGT | 2 cut(s) | 217, 339 |
| TaqI | TCGA | 1 cut(s) | 448 |
| TasI | AATT | 5 cut(s) | 40, 170, 422, 434, 590 |
| TatI | WGTACW | 1 cut(s) | 521 |
| TfiI | GAWTC | 4 cut(s) | 59, 106, 149, 532 |
| Tru1I | TTAA | 1 cut(s) | 258 |
| Tru9I | TTAA | 1 cut(s) | 258 |
| TscAI | CASTG | 4 cut(s) | 208, 298, 328, 531 |
| TseFI | GTSAC | 2 cut(s) | 199, 332 |
| TseI | GCWGC | 1 cut(s) | 482 |
| Tsp45I | GTSAC | 2 cut(s) | 199, 332 |
| TspDTI | ATGAA | 6 cut(s) | 153, 356, 403, 575, 588, 603 |
| TspRI | CASTG | 4 cut(s) | 208, 298, 328, 531 |
| XapI | RAATTY | 3 cut(s) | 40, 422, 434 |
| XceI | RCATGY | 1 cut(s) | 282 |
| ZraI | GACGTC | 1 cut(s) | 337 |