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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g04690 |
| rosa_chinensis | RchiOBHm_Chr1g0384141 |
| rosa_laevigata | RLG00000026068 |
| rosa_multiflora | Rmu_sc0005139.1_g000009 Rmu_sc0005139.1_g000011 Rmu_sc0005139.1_g000012 Rmu_sc0005139.1_g000014 Rmu_sc0005139.1_g000015 Rmu_sc0014419.1_g000002 Rmu_sc0014419.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00276890 Rroxscaffold_4G00276900 Rroxscaffold_4G00276920 Rroxscaffold_4G00276950 Rroxscaffold_6G00397390 |
| rosa_rugosa | Rorug01G0445100 Rorug01G0445200 Rorug01G0445200 Rorug01G0445300 |
| rosa_samantha | Rh1AG470700 Rh1AG470800 Rh1BG428100 Rh1BG428200 Rh1BG428300 Rh1BG428400 Rh1CG440800 Rh1CG441000 Rh1CG441100 Rh1DG461100 Rh1DG461200 |
| rosa_wichuraiana | Rw1G040180 Rw1G040190 Rw1G040200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 536 |
| AcsI | RAATTY | 3 cut(s) | 31, 401, 413 |
| AfaI | GTAC | 2 cut(s) | 208, 502 |
| AgsI | TTSAA | 8 cut(s) | 70, 140, 166, 227, 296, 375, 407, 458 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 399, 431 |
| AluBI | AGCT | 1 cut(s) | 433 |
| AluI | AGCT | 1 cut(s) | 433 |
| Alw26I | GTCTC | 3 cut(s) | 86, 281, 310 |
| AlwI | GGATC | 1 cut(s) | 536 |
| AoxI | GGCC | 1 cut(s) | 148 |
| ApoI | RAATTY | 3 cut(s) | 31, 401, 413 |
| AsuC2I | CCSGG | 1 cut(s) | 490 |
| AsuII | TTCGAA | 1 cut(s) | 340 |
| BbsI | GAAGAC | 2 cut(s) | 212, 561 |
| BccI | CCATC | 2 cut(s) | 224, 344 |
| BcnI | CCSGG | 1 cut(s) | 490 |
| BcoDI | GTCTC | 3 cut(s) | 86, 281, 310 |
| BfmI | CTRYAG | 1 cut(s) | 319 |
| BmcAI | AGTACT | 1 cut(s) | 502 |
| Bme1390I | CCNGG | 1 cut(s) | 490 |
| BmrFI | CCNGG | 1 cut(s) | 490 |
| BmrI | ACTGGG | 1 cut(s) | 178 |
| BmsI | GCATC | 1 cut(s) | 470 |
| BmuI | ACTGGG | 1 cut(s) | 178 |
| BpiI | GAAGAC | 2 cut(s) | 212, 561 |
| Bpu14I | TTCGAA | 1 cut(s) | 340 |
| BpuMI | CCSGG | 1 cut(s) | 490 |
| BsaI | GGTCTC | 2 cut(s) | 86, 281 |
| Bse1I | ACTGG | 1 cut(s) | 173 |
| BseGI | GGATG | 2 cut(s) | 178, 370 |
| BseNI | ACTGG | 1 cut(s) | 173 |
| BshFI | GGCC | 1 cut(s) | 150 |
| BsiSI | CCGG | 2 cut(s) | 309, 489 |
| BsmAI | GTCTC | 3 cut(s) | 86, 281, 310 |
| BsmBI | CGTCTC | 1 cut(s) | 310 |
| BsnI | GGCC | 1 cut(s) | 150 |
| Bso31I | GGTCTC | 2 cut(s) | 86, 281 |
| Bsp119I | TTCGAA | 1 cut(s) | 340 |
| Bsp143I | GATC | 1 cut(s) | 541 |
| BspANI | GGCC | 1 cut(s) | 150 |
| BspHI | TCATGA | 1 cut(s) | 565 |
| BspPI | GGATC | 1 cut(s) | 536 |
| BspT104I | TTCGAA | 1 cut(s) | 340 |
| BspTNI | GGTCTC | 2 cut(s) | 86, 281 |
| BsrI | ACTGG | 1 cut(s) | 173 |
| BssMI | GATC | 1 cut(s) | 541 |
| Bst4CI | ACNGT | 4 cut(s) | 61, 133, 190, 505 |
| Bst6I | CTCTTC | 1 cut(s) | 87 |
| BstBI | TTCGAA | 1 cut(s) | 340 |
| BstF5I | GGATG | 2 cut(s) | 178, 370 |
| BstKTI | GATC | 1 cut(s) | 544 |
| BstMAI | GTCTC | 3 cut(s) | 86, 281, 310 |
| BstMBI | GATC | 1 cut(s) | 541 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 18, 156 |
| BstNSI | RCATGY | 1 cut(s) | 273 |
| BstSCI | CCNGG | 1 cut(s) | 488 |
| BstSFI | CTRYAG | 1 cut(s) | 319 |
| BstV2I | GAAGAC | 2 cut(s) | 212, 561 |
| BsuRI | GGCC | 1 cut(s) | 150 |
| BtgZI | GCGATG | 1 cut(s) | 552 |
| BtsCI | GGATG | 2 cut(s) | 178, 370 |
| BtsI | GCAGTG | 2 cut(s) | 192, 319 |
| BtsIMutI | CAGTG | 3 cut(s) | 192, 282, 319 |
| CciI | TCATGA | 1 cut(s) | 565 |
| Csp6I | GTAC | 2 cut(s) | 207, 501 |
| CviAII | CATG | 7 cut(s) | 22, 146, 156, 270, 331, 355, 566 |
| CviJI | RGCY | 4 cut(s) | 150, 234, 433, 488 |
| CviKI_1 | RGCY | 4 cut(s) | 150, 234, 433, 488 |
| CviQI | GTAC | 2 cut(s) | 207, 501 |
| DpnI | GATC | 1 cut(s) | 543 |
| DpnII | GATC | 1 cut(s) | 541 |
| Eam1104I | CTCTTC | 1 cut(s) | 87 |
| EarI | CTCTTC | 1 cut(s) | 87 |
| Eco31I | GGTCTC | 2 cut(s) | 86, 281 |
| Esp3I | CGTCTC | 1 cut(s) | 310 |
| FaeI | CATG | 7 cut(s) | 25, 149, 159, 273, 334, 358, 569 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 204, 236 |
| FatI | CATG | 7 cut(s) | 21, 145, 155, 269, 330, 354, 565 |
| FokI | GGATG | 2 cut(s) | 185, 377 |
| HaeIII | GGCC | 1 cut(s) | 150 |
| HapII | CCGG | 2 cut(s) | 309, 489 |
| Hin1II | CATG | 7 cut(s) | 25, 149, 159, 273, 334, 358, 569 |
| HincII | GTYRAC | 1 cut(s) | 495 |
| HindII | GTYRAC | 1 cut(s) | 495 |
| HinfI | GANTC | 5 cut(s) | 50, 97, 140, 358, 511 |
| HpaII | CCGG | 2 cut(s) | 309, 489 |
| Hpy166II | GTNNAC | 1 cut(s) | 495 |
| Hpy188I | TCNGA | 2 cut(s) | 102, 481 |
| Hpy188III | TCNNGA | 7 cut(s) | 70, 112, 227, 362, 386, 455, 566 |
| Hpy8I | GTNNAC | 1 cut(s) | 495 |
| HpyAV | CCTTC | 1 cut(s) | 206 |
| HpyCH4III | ACNGT | 4 cut(s) | 61, 133, 190, 505 |
| HpyCH4IV | ACGT | 1 cut(s) | 205 |
| HpyCH4V | TGCA | 2 cut(s) | 87, 197 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 18, 156 |
| HpySE526I | ACGT | 1 cut(s) | 205 |
| Hsp92II | CATG | 7 cut(s) | 25, 149, 159, 273, 334, 358, 569 |
| Kzo9I | GATC | 1 cut(s) | 541 |
| LweI | GCATC | 1 cut(s) | 470 |
| MaeII | ACGT | 1 cut(s) | 205 |
| MaeIII | GTNAC | 1 cut(s) | 190 |
| MalI | GATC | 1 cut(s) | 543 |
| MboI | GATC | 1 cut(s) | 541 |
| MboII | GAAGA | 6 cut(s) | 17, 104, 127, 212, 215, 566 |
| MluCI | AATT | 5 cut(s) | 31, 161, 401, 413, 569 |
| MlyI | GAGTC | 1 cut(s) | 367 |
| MnlI | CCTC | 3 cut(s) | 115, 435, 501 |
| MseI | TTAA | 2 cut(s) | 249, 589 |
| MslI | CAYNNNNRTG | 1 cut(s) | 564 |
| MspI | CCGG | 2 cut(s) | 309, 489 |
| MspR9I | CCNGG | 1 cut(s) | 490 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 18, 156 |
| NciI | CCSGG | 1 cut(s) | 490 |
| NdeII | GATC | 1 cut(s) | 541 |
| NlaIII | CATG | 7 cut(s) | 25, 149, 159, 273, 334, 358, 569 |
| NmeAIII | GCCGAG | 1 cut(s) | 258 |
| NmuCI | GTSAC | 1 cut(s) | 190 |
| NspI | RCATGY | 1 cut(s) | 273 |
| NspV | TTCGAA | 1 cut(s) | 340 |
| PagI | TCATGA | 1 cut(s) | 565 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 477 |
| PfeI | GAWTC | 4 cut(s) | 50, 97, 140, 511 |
| PleI | GAGTC | 1 cut(s) | 366 |
| PpsI | GAGTC | 1 cut(s) | 366 |
| RsaI | GTAC | 2 cut(s) | 208, 502 |
| RsaNI | GTAC | 2 cut(s) | 207, 501 |
| RseI | CAYNNNNRTG | 1 cut(s) | 564 |
| SaqAI | TTAA | 2 cut(s) | 249, 589 |
| Sau3AI | GATC | 1 cut(s) | 541 |
| ScaI | AGTACT | 1 cut(s) | 502 |
| SchI | GAGTC | 1 cut(s) | 367 |
| ScrFI | CCNGG | 1 cut(s) | 490 |
| SetI | ASST | 5 cut(s) | 126, 208, 217, 427, 435 |
| SfaNI | GCATC | 1 cut(s) | 470 |
| SfcI | CTRYAG | 1 cut(s) | 319 |
| SfuI | TTCGAA | 1 cut(s) | 340 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 564 |
| Sse9I | AATT | 5 cut(s) | 31, 161, 401, 413, 569 |
| StyD4I | CCNGG | 1 cut(s) | 488 |
| TaaI | ACNGT | 4 cut(s) | 61, 133, 190, 505 |
| TaiI | ACGT | 1 cut(s) | 208 |
| TaqI | TCGA | 2 cut(s) | 340, 427 |
| TasI | AATT | 5 cut(s) | 31, 161, 401, 413, 569 |
| TatI | WGTACW | 1 cut(s) | 500 |
| TfiI | GAWTC | 4 cut(s) | 50, 97, 140, 511 |
| Tru1I | TTAA | 2 cut(s) | 249, 589 |
| Tru9I | TTAA | 2 cut(s) | 249, 589 |
| TscAI | CASTG | 3 cut(s) | 199, 289, 319 |
| TseFI | GTSAC | 1 cut(s) | 190 |
| Tsp45I | GTSAC | 1 cut(s) | 190 |
| TspDTI | ATGAA | 5 cut(s) | 144, 382, 554, 567, 582 |
| TspRI | CASTG | 3 cut(s) | 199, 289, 319 |
| XapI | RAATTY | 3 cut(s) | 31, 401, 413 |
| XceI | RCATGY | 1 cut(s) | 273 |
| ZrmI | AGTACT | 1 cut(s) | 502 |