RLG00000028975

FGGY family of carbohydrate kinases, C-terminal domain

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
30953776 .. 30955655
1880 bp
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UTR
Exon/CDS
Intron
RLM00000028975

Sequence Viewer

Length: 366 bp
ATGGCTTTTGGGAGCAGTGGAGGTGAACCTGAAGTTGGGGAGTGGCTTTATCTGGGACTGGACTTTGGGACTTCTGGAGCGAGAAAGAGTGACGAAAAAATGTATTGGGCCTGTTCATGGAAGGCCACACTCTTCTCACTTCTCGGAGACATTCCATCTCATCTTCGTAAACTGATTGCTTTCATTTCCATTGATGGGACTTCTACAACTACTCTCATTGTTGACAGCAACACAGGAGAGCCGTTATGGAGACCTTTCCTCTACAATGAGAGCTGCCCTGATGCTTTACCGACGGTTAAATCCATTGCTTCTCCAAACCATACAATCTGCTATGGTTCCTCTACTCTGTGCAAGCTTGTCTCCTAG

Protein Analysis

122

Amino Acids

13.13

Weight (kDa)

5.21

Isoelectric Point (pI)

34.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 51
AfiI CCNNNNNNNGG 3 cut(s) 35, 117, 195
AjuI GAANNNNNNNTTGG 2 cut(s) 18, 50
AluBI AGCT 2 cut(s) 273, 355
AluI AGCT 2 cut(s) 273, 355
Alw26I GTCTC 2 cut(s) 141, 244
AoxI GGCC 2 cut(s) 108, 123
ApeKI GCWGC 1 cut(s) 273
AspS9I GGNCC 1 cut(s) 108
AsuHPI GGTGA 1 cut(s) 35
BbvI GCAGC 1 cut(s) 260
BccI CCATC 2 cut(s) 163, 188
BceAI ACGGC 1 cut(s) 226
BcoDI GTCTC 2 cut(s) 141, 244
BfaI CTAG 1 cut(s) 364
BisI GCNGC 1 cut(s) 274
BlsI GCNGC 1 cut(s) 275
BmgT120I GGNCC 1 cut(s) 108
BmiI GGNNCC 1 cut(s) 337
BmsI GCATC 1 cut(s) 271
BpmI CTGGAG 1 cut(s) 96
BsaI GGTCTC 1 cut(s) 244
Bsc4I CCNNNNNNNGG 3 cut(s) 35, 117, 195
Bse1I ACTGG 1 cut(s) 63
Bse3DI GCAATG 1 cut(s) 303
BseLI CCNNNNNNNGG 3 cut(s) 35, 117, 195
BseMI GCAATG 1 cut(s) 303
BseNI ACTGG 1 cut(s) 63
BseXI GCAGC 1 cut(s) 260
BshFI GGCC 2 cut(s) 110, 125
BslFI GGGAC 3 cut(s) 69, 82, 211
BslI CCNNNNNNNGG 3 cut(s) 35, 117, 195
BsmAI GTCTC 2 cut(s) 141, 244
BsmFI GGGAC 3 cut(s) 69, 82, 211
BsnI GGCC 2 cut(s) 110, 125
Bso31I GGTCTC 1 cut(s) 244
BspANI GGCC 2 cut(s) 110, 125
BspLI GGNNCC 1 cut(s) 337
BspTNI GGTCTC 1 cut(s) 244
BsrDI GCAATG 1 cut(s) 303
BsrI ACTGG 1 cut(s) 63
Bst4CI ACNGT 1 cut(s) 295
Bst6I CTCTTC 1 cut(s) 137
BstC8I GCNNGC 1 cut(s) 353
BstMAI GTCTC 2 cut(s) 141, 244
BstV1I GCAGC 1 cut(s) 260
BsuRI GGCC 2 cut(s) 110, 125
BtsI GCAGTG 1 cut(s) 22
BtsIMutI CAGTG 1 cut(s) 22
Cac8I GCNNGC 1 cut(s) 353
Cfr13I GGNCC 1 cut(s) 108
CviAII CATG 1 cut(s) 117
CviJI RGCY 7 cut(s) 5, 46, 110, 125, 241, 273, 355
CviKI_1 RGCY 7 cut(s) 5, 46, 110, 125, 241, 273, 355
Eam1104I CTCTTC 1 cut(s) 137
EarI CTCTTC 1 cut(s) 137
Eco31I GGTCTC 1 cut(s) 244
Eco57I CTGAAG 1 cut(s) 51
FaeI CATG 1 cut(s) 120
FaiI YATR 4 cut(s) 118, 247, 321, 333
FaqI GGGAC 3 cut(s) 69, 82, 211
FatI CATG 1 cut(s) 116
Fnu4HI GCNGC 1 cut(s) 274
Fsp4HI GCNGC 1 cut(s) 274
FspBI CTAG 1 cut(s) 364
GluI GCNGC 1 cut(s) 274
GsuI CTGGAG 1 cut(s) 96
HaeIII GGCC 2 cut(s) 110, 125
Hin1II CATG 1 cut(s) 120
HincII GTYRAC 1 cut(s) 223
HindII GTYRAC 1 cut(s) 223
HindIII AAGCTT 1 cut(s) 353
HphI GGTGA 1 cut(s) 35
Hpy166II GTNNAC 3 cut(s) 26, 170, 223
Hpy188I TCNGA 1 cut(s) 146
Hpy188III TCNNGA 1 cut(s) 75
Hpy8I GTNNAC 3 cut(s) 26, 170, 223
Hpy99I CGWCG 1 cut(s) 295
HpyAV CCTTC 1 cut(s) 115
HpyCH4III ACNGT 1 cut(s) 295
HpyCH4V TGCA 1 cut(s) 351
Hsp92II CATG 1 cut(s) 120
LmnI GCTCC 2 cut(s) 12, 77
LpnPI CCDG 7 cut(s) 38, 42, 44, 60, 124, 219, 291
Lsp1109I GCAGC 1 cut(s) 260
LweI GCATC 1 cut(s) 271
MaeI CTAG 1 cut(s) 364
MaeIII GTNAC 1 cut(s) 89
MboII GAAGA 2 cut(s) 124, 155
MnlI CCTC 3 cut(s) 14, 269, 349
MseI TTAA 1 cut(s) 297
NlaIII CATG 1 cut(s) 120
NlaIV GGNNCC 1 cut(s) 337
NmuCI GTSAC 1 cut(s) 89
PkrI GCNGC 1 cut(s) 275
PspN4I GGNNCC 1 cut(s) 337
PspPI GGNCC 1 cut(s) 108
SaqAI TTAA 1 cut(s) 297
SatI GCNGC 1 cut(s) 274
Sau96I GGNCC 1 cut(s) 108
SetI ASST 5 cut(s) 25, 31, 256, 275, 357
SfaNI GCATC 1 cut(s) 271
SspMI CTAG 1 cut(s) 364
TaaI ACNGT 1 cut(s) 295
Tru1I TTAA 1 cut(s) 297
Tru9I TTAA 1 cut(s) 297
TscAI CASTG 1 cut(s) 22
TseFI GTSAC 1 cut(s) 89
TseI GCWGC 1 cut(s) 273
Tsp45I GTSAC 1 cut(s) 89
TspDTI ATGAA 2 cut(s) 105, 172
TspRI CASTG 1 cut(s) 22
XspI CTAG 1 cut(s) 364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.