RLG00000036665

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
83083666 .. 83084061
396 bp
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UTR
Exon/CDS
Intron
RLM00000036665

Sequence Viewer

Length: 396 bp
ATGGTCATTCTCAGTTTTTGTTCTTCCTTTGCTCCTCAAAATGTCCAAACCGTGAACAAACCTCCTTCTTCTTATCTACCTTACCCTGCCATGGAAGAGTTCGTACTCCTCTGCAACCACCTCTTCAGATCTCAGGTGTCTTTTCTAAGATCTATTTTGGTTTGGTTGTTGTTATTCCTCTATGCGAGATCTTCTCGTAATCGGTCAACTGGAAAATGTATGGCGGCTCTGTCCGTATCCTCATCTTTGCAGACCACCCTTGATTACCAATCCTCGCCCGCGATTTCTGTCGGAGTTCCGGTGACCAATATGCTATGGTGGCTGCAAGTTAGAGATGAAGAAGAAGCTTTGATTAGGGTTTGGGTTTTTTGGGCTGCTTGGGCCTTTAAGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

132

Amino Acids

15.02

Weight (kDa)

8.96

Isoelectric Point (pI)

74.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 281
AciI CCGC 2 cut(s) 224, 279
AcuI CTGAAG 1 cut(s) 109
AfaI GTAC 1 cut(s) 105
AfiI CCNNNNNNNGG 1 cut(s) 91
AluBI AGCT 1 cut(s) 347
AluI AGCT 1 cut(s) 347
AoxI GGCC 1 cut(s) 381
ApeKI GCWGC 2 cut(s) 322, 374
AspS9I GGNCC 1 cut(s) 381
AsuHPI GGTGA 1 cut(s) 313
BarI GAAGNNNNNNTAC 2 cut(s) 87, 119
BbvI GCAGC 2 cut(s) 309, 361
BciVI GTATCC 1 cut(s) 247
BfuI GTATCC 1 cut(s) 247
BglII AGATCT 3 cut(s) 128, 149, 188
BisI GCNGC 3 cut(s) 225, 323, 375
BlsI GCNGC 3 cut(s) 226, 324, 376
BmgT120I GGNCC 1 cut(s) 381
BplI GAGNNNNNCTC 2 cut(s) 178, 210
BsaJI CCNNGG 1 cut(s) 90
BsaWI WCCGGW 1 cut(s) 298
BsaXI ACNNNNNCTCC 2 cut(s) 285, 315
Bsc4I CCNNNNNNNGG 1 cut(s) 91
Bse1I ACTGG 1 cut(s) 214
BseDI CCNNGG 1 cut(s) 90
BseLI CCNNNNNNNGG 1 cut(s) 91
BseMII CTCAG 2 cut(s) 25, 146
BseNI ACTGG 1 cut(s) 214
BseRI GAGGAG 2 cut(s) 24, 98
BseXI GCAGC 2 cut(s) 309, 361
Bsh1236I CGCG 1 cut(s) 281
BshFI GGCC 1 cut(s) 383
BsiSI CCGG 1 cut(s) 299
BslI CCNNNNNNNGG 1 cut(s) 91
BsnI GGCC 1 cut(s) 383
Bsp143I GATC 3 cut(s) 128, 149, 188
Bsp19I CCATGG 1 cut(s) 90
BspACI CCGC 2 cut(s) 224, 279
BspANI GGCC 1 cut(s) 383
BspCNI CTCAG 2 cut(s) 24, 145
BspFNI CGCG 1 cut(s) 281
BsrI ACTGG 1 cut(s) 214
BssECI CCNNGG 1 cut(s) 90
BssMI GATC 3 cut(s) 128, 149, 188
BssT1I CCWWGG 1 cut(s) 90
Bst4CI ACNGT 1 cut(s) 52
Bst6I CTCTTC 2 cut(s) 90, 128
BstC8I GCNNGC 1 cut(s) 279
BstDEI CTNAG 3 cut(s) 11, 132, 146
BstDSI CCRYGG 1 cut(s) 90
BstEII GGTNACC 1 cut(s) 301
BstFNI CGCG 1 cut(s) 281
BstKTI GATC 3 cut(s) 131, 152, 191
BstMBI GATC 3 cut(s) 128, 149, 188
BstMWI GCNNNNNNNGC 2 cut(s) 319, 380
BstPI GGTNACC 1 cut(s) 301
BstUI CGCG 1 cut(s) 281
BstV1I GCAGC 2 cut(s) 309, 361
BstX2I RGATCY 3 cut(s) 128, 149, 188
BstYI RGATCY 3 cut(s) 128, 149, 188
BsuI GTATCC 1 cut(s) 247
BsuRI GGCC 1 cut(s) 383
BtgI CCRYGG 1 cut(s) 90
Cac8I GCNNGC 1 cut(s) 279
Cfr13I GGNCC 1 cut(s) 381
Csp6I GTAC 1 cut(s) 104
CviAII CATG 1 cut(s) 91
CviJI RGCY 5 cut(s) 227, 322, 347, 374, 383
CviKI_1 RGCY 5 cut(s) 227, 322, 347, 374, 383
CviQI GTAC 1 cut(s) 104
DdeI CTNAG 3 cut(s) 11, 132, 146
DpnI GATC 3 cut(s) 130, 151, 190
DpnII GATC 3 cut(s) 128, 149, 188
Eam1104I CTCTTC 2 cut(s) 90, 128
EarI CTCTTC 2 cut(s) 90, 128
Eco130I CCWWGG 1 cut(s) 90
Eco57I CTGAAG 1 cut(s) 109
Eco91I GGTNACC 1 cut(s) 301
EcoO65I GGTNACC 1 cut(s) 301
EcoT14I CCWWGG 1 cut(s) 90
ErhI CCWWGG 1 cut(s) 90
FaeI CATG 1 cut(s) 94
FaiI YATR 5 cut(s) 92, 183, 221, 311, 316
FatI CATG 1 cut(s) 90
FauI CCCGC 1 cut(s) 286
Fnu4HI GCNGC 3 cut(s) 225, 323, 375
Fsp4HI GCNGC 3 cut(s) 225, 323, 375
GluI GCNGC 3 cut(s) 225, 323, 375
HaeIII GGCC 1 cut(s) 383
HapII CCGG 1 cut(s) 299
Hin1II CATG 1 cut(s) 94
HincII GTYRAC 1 cut(s) 207
HindII GTYRAC 1 cut(s) 207
HindIII AAGCTT 1 cut(s) 345
HpaII CCGG 1 cut(s) 299
HphI GGTGA 1 cut(s) 313
Hpy166II GTNNAC 2 cut(s) 55, 207
Hpy188I TCNGA 2 cut(s) 128, 293
Hpy8I GTNNAC 2 cut(s) 55, 207
HpyAV CCTTC 1 cut(s) 75
HpyCH4III ACNGT 1 cut(s) 52
HpyCH4V TGCA 3 cut(s) 114, 250, 325
HpyF10VI GCNNNNNNNGC 2 cut(s) 319, 380
HpyF3I CTNAG 3 cut(s) 11, 132, 146
Hsp92II CATG 1 cut(s) 94
Kzo9I GATC 3 cut(s) 128, 149, 188
LmnI GCTCC 1 cut(s) 37
LpnPI CCDG 4 cut(s) 99, 119, 195, 312
Lsp1109I GCAGC 2 cut(s) 309, 361
MaeIII GTNAC 1 cut(s) 301
MalI GATC 3 cut(s) 130, 151, 190
MboI GATC 3 cut(s) 128, 149, 188
MboII GAAGA 7 cut(s) 15, 60, 107, 115, 183, 350, 353
MflI RGATCY 3 cut(s) 128, 149, 188
MmeI TCCRAC 1 cut(s) 271
MnlI CCTC 7 cut(s) 45, 72, 119, 131, 188, 250, 283
MseI TTAA 1 cut(s) 387
MspI CCGG 1 cut(s) 299
MvnI CGCG 1 cut(s) 281
MwoI GCNNNNNNNGC 2 cut(s) 319, 380
NcoI CCATGG 1 cut(s) 90
NdeII GATC 3 cut(s) 128, 149, 188
NlaIII CATG 1 cut(s) 94
NmuCI GTSAC 1 cut(s) 301
PkrI GCNGC 3 cut(s) 226, 324, 376
PspEI GGTNACC 1 cut(s) 301
PspPI GGNCC 1 cut(s) 381
PsuI RGATCY 3 cut(s) 128, 149, 188
RsaI GTAC 1 cut(s) 105
RsaNI GTAC 1 cut(s) 104
SaqAI TTAA 1 cut(s) 387
SatI GCNGC 3 cut(s) 225, 323, 375
Sau3AI GATC 3 cut(s) 128, 149, 188
Sau96I GGNCC 1 cut(s) 381
SetI ASST 5 cut(s) 64, 82, 123, 138, 349
SsiI CCGC 2 cut(s) 224, 279
StyI CCWWGG 1 cut(s) 90
TaaI ACNGT 1 cut(s) 52
TaqII GACCGA 1 cut(s) 192
TauI GCSGC 1 cut(s) 227
Tru1I TTAA 1 cut(s) 387
Tru9I TTAA 1 cut(s) 387
TseFI GTSAC 1 cut(s) 301
TseI GCWGC 2 cut(s) 322, 374
Tsp45I GTSAC 1 cut(s) 301
TspDTI ATGAA 1 cut(s) 351
TspGWI ACGGA 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.