TIP41-like family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G34270 |
| fragaria_vesca | FvH4_2g04780 FvH4_2g04780 |
| malus_domestica | MD00G1108700.v1.1 MD10G1100100.v1.1 |
| prunus_persica | Prupe.8G137600_v2.0.a1 Prupe.8G137600_v2.0.a1 Prupe.8G137600_v2.0.a1 |
| pyrus_communis | pycom10g08600 |
| rosa_chinensis | RchiOBHm_Chr6g0254491 RchiOBHm_Chr6g0257511 |
| rosa_laevigata | RLG00000014907 RLG00000014910 |
| rosa_multiflora | Rmu_co8254825.1_g000001 Rmu_sc0002113.1_g000001 Rmu_sc0004702.1_g000006 Rmu_sc0004702.1_g000007 Rmu_sc0009578.1_g000010 Rmu_sc0023759.1_g000001 Rmu_ssc0000481.1_g000008 |
| rosa_roxburghii | Rroxscaffold_7G00210720 Rroxscaffold_7G00210760 |
| rosa_rugosa | Rorug05G0552600 Rorug05G0552700 Rorug05G0552700 Rorug05G0552800 |
| rosa_samantha | Rh6AG069900 Rh6AG088000 Rh6BG062400 Rh6BG080800 Rh6CG062200 Rh6CG062300 Rh6CG077000 Rh6DG059200 Rh6DG059300 Rh6DG073100 |
| rosa_wichuraiana | Rw6G006120 Rw6G007800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 15 |
| AccBSI | CCGCTC | 1 cut(s) | 166 |
| AciI | CCGC | 2 cut(s) | 117, 166 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 23 |
| AluBI | AGCT | 1 cut(s) | 199 |
| AluI | AGCT | 1 cut(s) | 199 |
| BfuAI | ACCTGC | 1 cut(s) | 15 |
| BmrI | ACTGGG | 1 cut(s) | 29 |
| BmsI | GCATC | 1 cut(s) | 69 |
| BmuI | ACTGGG | 1 cut(s) | 29 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 23 |
| Bse1I | ACTGG | 1 cut(s) | 24 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 23 |
| BseNI | ACTGG | 1 cut(s) | 24 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 23 |
| BspACI | CCGC | 2 cut(s) | 117, 166 |
| BspMI | ACCTGC | 1 cut(s) | 15 |
| BsrBI | CCGCTC | 1 cut(s) | 166 |
| BsrI | ACTGG | 1 cut(s) | 24 |
| Bst4CI | ACNGT | 1 cut(s) | 143 |
| Bst6I | CTCTTC | 1 cut(s) | 139 |
| BtsIMutI | CAGTG | 1 cut(s) | 17 |
| BveI | ACCTGC | 1 cut(s) | 15 |
| CviAII | CATG | 1 cut(s) | 158 |
| CviJI | RGCY | 2 cut(s) | 71, 199 |
| CviKI_1 | RGCY | 2 cut(s) | 71, 199 |
| Eam1104I | CTCTTC | 1 cut(s) | 139 |
| EarI | CTCTTC | 1 cut(s) | 139 |
| EciI | GGCGGA | 1 cut(s) | 132 |
| FaeI | CATG | 1 cut(s) | 161 |
| FaiI | YATR | 3 cut(s) | 85, 103, 159 |
| FatI | CATG | 1 cut(s) | 157 |
| Hin1II | CATG | 1 cut(s) | 161 |
| HinfI | GANTC | 1 cut(s) | 154 |
| HpyCH4III | ACNGT | 1 cut(s) | 143 |
| HpyCH4V | TGCA | 3 cut(s) | 10, 31, 54 |
| Hsp92II | CATG | 1 cut(s) | 161 |
| LpnPI | CCDG | 2 cut(s) | 5, 20 |
| LweI | GCATC | 1 cut(s) | 69 |
| MbiI | CCGCTC | 1 cut(s) | 166 |
| MboII | GAAGA | 3 cut(s) | 117, 126, 168 |
| MluCI | AATT | 2 cut(s) | 40, 111 |
| MlyI | GAGTC | 1 cut(s) | 163 |
| MnlI | CCTC | 2 cut(s) | 17, 83 |
| NlaIII | CATG | 1 cut(s) | 161 |
| NmeAIII | GCCGAG | 1 cut(s) | 187 |
| PleI | GAGTC | 1 cut(s) | 162 |
| PpsI | GAGTC | 1 cut(s) | 162 |
| SchI | GAGTC | 1 cut(s) | 163 |
| SetI | ASST | 3 cut(s) | 9, 94, 201 |
| SfaNI | GCATC | 1 cut(s) | 69 |
| SgeI | CNNG | 6 cut(s) | 19, 32, 110, 170, 175, 194 |
| Sse9I | AATT | 2 cut(s) | 40, 111 |
| SsiI | CCGC | 2 cut(s) | 117, 166 |
| TaaI | ACNGT | 1 cut(s) | 143 |
| TasI | AATT | 2 cut(s) | 40, 111 |
| TscAI | CASTG | 1 cut(s) | 24 |
| TspDTI | ATGAA | 2 cut(s) | 118, 124 |
| TspRI | CASTG | 1 cut(s) | 24 |