Rmu_sc0000397.1_g000007

Mediates both low-affinity uptake and efflux of sugar across the membrane

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000397.1
Physical Location & Seq
Forward (+)
42278 .. 43032
755 bp
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UTR
Exon/CDS
Intron
Rmu_sc0000397.1_g000007.1.cds

Sequence Viewer

Length: 573 bp
atgttgaccttcggaaatgttgtccttatttccatctttgccgtcttcgacatcattgccatcgcacagcttagcatccatcgaatgaacttcggatgttgtgatagtgctcagaatcacagcgtttgtcacgtggtgatccgcacaaaaaccgttgaatttatgctgttcagcttatcattcttccttacattaagtggtgtgttgtggtttgcgtatggactcgtcgtcaaggacatattcatagcaatttcatatgggttaggttttgtcttgggtctccttcagatgttgttctacgccatatacaaaaaccgcaatgaggtcatagttgataaggagaagaagcctccaggaccagaccacgtaacaaatgctgtgattctgagcactatcgcaacatccaaagttcattcggtggatgctaagccgtgcgatgacaatgatgtcgaaggtggcaaagatggaaataaggacagtgatagcaatgaacataagtgtatggagttggtggtgaatatggatgcttcgggtgacgttcaactgaaatctgatgaaccatgtgcagtgtga

Protein Analysis

190

Amino Acids

20.87

Weight (kDa)

5.23

Isoelectric Point (pI)

22.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 446
AciI CCGC 2 cut(s) 142, 316
AclWI GGATC 1 cut(s) 133
AcsI RAATTY 1 cut(s) 158
AcuI CTGAAG 1 cut(s) 269
AcvI CACGTG 1 cut(s) 133
AdeI CACNNNGTG 1 cut(s) 136
AfiI CCNNNNNNNGG 1 cut(s) 322
AgsI TTSAA 2 cut(s) 158, 542
AhdI GACNNNNNGTC 1 cut(s) 227
AjnI CCWGG 1 cut(s) 352
AluBI AGCT 2 cut(s) 70, 174
AluI AGCT 2 cut(s) 70, 174
Alw21I GWGCWC 2 cut(s) 112, 392
Alw26I GTCTC 1 cut(s) 284
AlwI GGATC 1 cut(s) 133
ApoI RAATTY 1 cut(s) 158
AspS9I GGNCC 1 cut(s) 356
AsuHPI GGTGA 3 cut(s) 148, 526, 545
AvaII GGWCC 1 cut(s) 356
BbrPI CACGTG 1 cut(s) 133
BbsI GAAGAC 1 cut(s) 37
Bbv12I GWGCWC 2 cut(s) 112, 392
BccI CCATC 4 cut(s) 41, 68, 87, 458
BceAI ACGGC 2 cut(s) 26, 415
BcgI CGANNNNNNTGC 2 cut(s) 38, 72
BciT130I CCWGG 1 cut(s) 354
BcoDI GTCTC 1 cut(s) 284
BlpI GCTNAGC 2 cut(s) 71, 426
Bme1390I CCNGG 1 cut(s) 354
Bme18I GGWCC 1 cut(s) 356
BmeRI GACNNNNNGTC 1 cut(s) 227
BmgT120I GGNCC 1 cut(s) 356
BmrFI CCNGG 1 cut(s) 354
BmsI GCATC 3 cut(s) 84, 412, 514
BpiI GAAGAC 1 cut(s) 37
BpmI CTGGAG 1 cut(s) 336
Bpu1102I GCTNAGC 2 cut(s) 71, 426
BsaAI YACGTR 2 cut(s) 133, 367
BsaI GGTCTC 1 cut(s) 284
Bsc4I CCNNNNNNNGG 1 cut(s) 322
Bse3DI GCAATG 3 cut(s) 54, 325, 493
BseBI CCWGG 1 cut(s) 354
BseGI GGATG 5 cut(s) 75, 101, 401, 427, 529
BseLI CCNNNNNNNGG 1 cut(s) 322
BseMI GCAATG 3 cut(s) 54, 325, 493
BseMII CTCAG 2 cut(s) 125, 377
BsiHKAI GWGCWC 2 cut(s) 112, 392
BslI CCNNNNNNNGG 1 cut(s) 322
BsmAI GTCTC 1 cut(s) 284
Bso31I GGTCTC 1 cut(s) 284
Bsp1286I GDGCHC 2 cut(s) 112, 392
Bsp143I GATC 1 cut(s) 138
Bsp1720I GCTNAGC 2 cut(s) 71, 426
BspACI CCGC 2 cut(s) 142, 316
BspCNI CTCAG 2 cut(s) 124, 378
BspPI GGATC 1 cut(s) 133
BspTNI GGTCTC 1 cut(s) 284
BsrDI GCAATG 3 cut(s) 54, 325, 493
BssMI GATC 1 cut(s) 138
Bst2UI CCWGG 1 cut(s) 354
Bst4CI ACNGT 2 cut(s) 154, 479
BstBAI YACGTR 2 cut(s) 133, 367
BstDEI CTNAG 4 cut(s) 71, 111, 386, 426
BstF5I GGATG 5 cut(s) 75, 101, 401, 427, 529
BstKTI GATC 1 cut(s) 141
BstMAI GTCTC 1 cut(s) 284
BstMBI GATC 1 cut(s) 138
BstNI CCWGG 1 cut(s) 354
BstSCI CCNGG 1 cut(s) 352
BstV2I GAAGAC 1 cut(s) 37
BtgZI GCGATG 2 cut(s) 46, 450
BtsCI GGATG 5 cut(s) 75, 101, 401, 427, 529
BtsI GCAGTG 1 cut(s) 573
BtsIMutI CAGTG 2 cut(s) 484, 573
Cfr13I GGNCC 1 cut(s) 356
CviAII CATG 1 cut(s) 561
CviJI RGCY 4 cut(s) 70, 174, 349, 430
CviKI_1 RGCY 4 cut(s) 70, 174, 349, 430
DdeI CTNAG 4 cut(s) 71, 111, 386, 426
DpnI GATC 1 cut(s) 140
DpnII GATC 1 cut(s) 138
DraIII CACNNNGTG 1 cut(s) 136
DrdI GACNNNNNNGTC 1 cut(s) 446
DriI GACNNNNNGTC 1 cut(s) 227
DseDI GACNNNNNNGTC 1 cut(s) 446
Eam1105I GACNNNNNGTC 1 cut(s) 227
Eco31I GGTCTC 1 cut(s) 284
Eco47I GGWCC 1 cut(s) 356
Eco57I CTGAAG 1 cut(s) 269
Eco72I CACGTG 1 cut(s) 133
EcoRII CCWGG 1 cut(s) 352
FaeI CATG 1 cut(s) 564
FatI CATG 1 cut(s) 560
FauNDI CATATG 1 cut(s) 256
FokI GGATG 5 cut(s) 62, 108, 388, 434, 536
GsuI CTGGAG 1 cut(s) 336
Hin1II CATG 1 cut(s) 564
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 3 cut(s) 115, 222, 382
HphI GGTGA 3 cut(s) 148, 526, 545
Hpy166II GTNNAC 1 cut(s) 6
Hpy188I TCNGA 6 cut(s) 14, 95, 114, 288, 387, 553
Hpy8I GTNNAC 1 cut(s) 6
Hpy99I CGWCG 1 cut(s) 230
HpyAV CCTTC 3 cut(s) 19, 293, 446
HpyCH4III ACNGT 2 cut(s) 154, 479
HpyCH4IV ACGT 3 cut(s) 132, 366, 537
HpyCH4V TGCA 1 cut(s) 566
HpyF3I CTNAG 4 cut(s) 71, 111, 386, 426
HpySE526I ACGT 3 cut(s) 132, 366, 537
Hsp92II CATG 1 cut(s) 564
Kzo9I GATC 1 cut(s) 138
LpnPI CCDG 3 cut(s) 339, 366, 372
LweI GCATC 3 cut(s) 84, 412, 514
MaeII ACGT 3 cut(s) 132, 366, 537
MaeIII GTNAC 3 cut(s) 128, 367, 533
MalI GATC 1 cut(s) 140
MboI GATC 1 cut(s) 138
MboII GAAGA 3 cut(s) 37, 175, 355
MhlI GDGCHC 2 cut(s) 112, 392
MluCI AATT 2 cut(s) 158, 249
MlyI GAGTC 1 cut(s) 216
MnlI CCTC 2 cut(s) 316, 360
MseI TTAA 1 cut(s) 194
MspR9I CCNGG 1 cut(s) 354
MvaI CCWGG 1 cut(s) 354
NdeI CATATG 1 cut(s) 256
NdeII GATC 1 cut(s) 138
NlaIII CATG 1 cut(s) 564
NmuCI GTSAC 2 cut(s) 128, 533
PfeI GAWTC 2 cut(s) 115, 382
PfoI TCCNGGA 1 cut(s) 352
PleI GAGTC 1 cut(s) 216
PmaCI CACGTG 1 cut(s) 133
PmlI CACGTG 1 cut(s) 133
PpsI GAGTC 1 cut(s) 216
Ppu21I YACGTR 2 cut(s) 133, 367
Psp6I CCWGG 1 cut(s) 352
PspCI CACGTG 1 cut(s) 133
PspGI CCWGG 1 cut(s) 352
PspPI GGNCC 1 cut(s) 356
SaqAI TTAA 1 cut(s) 194
Sau3AI GATC 1 cut(s) 138
Sau96I GGNCC 1 cut(s) 356
SchI GAGTC 1 cut(s) 216
ScrFI CCNGG 1 cut(s) 354
SduI GDGCHC 2 cut(s) 112, 392
SetI ASST 9 cut(s) 11, 72, 135, 176, 268, 327, 369, 457, 540
SfaNI GCATC 3 cut(s) 84, 412, 514
SinI GGWCC 1 cut(s) 356
Sse9I AATT 2 cut(s) 158, 249
SsiI CCGC 2 cut(s) 142, 316
StyD4I CCNGG 1 cut(s) 352
TaaI ACNGT 2 cut(s) 154, 479
TaiI ACGT 3 cut(s) 135, 369, 540
TaqI TCGA 3 cut(s) 48, 82, 450
TasI AATT 2 cut(s) 158, 249
TfiI GAWTC 2 cut(s) 115, 382
Tru1I TTAA 1 cut(s) 194
Tru9I TTAA 1 cut(s) 194
TscAI CASTG 2 cut(s) 484, 573
TseFI GTSAC 2 cut(s) 128, 533
Tsp45I GTSAC 2 cut(s) 128, 533
TspDTI ATGAA 6 cut(s) 101, 232, 243, 401, 504, 570
TspRI CASTG 2 cut(s) 484, 573
VpaK11BI GGWCC 1 cut(s) 356
XapI RAATTY 1 cut(s) 158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.