Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001426.1

Orthogroup ID

OG0001775

Physical Location & Seq

Genomic Coordinates Forward (+)

26730 .. 29063

Gene Structure 2334 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

atggctcacggcgacggtgacggcgttactcacgacctgttctcgctgctcacctccgacgatcgggacttccttgtccgtaacaacggcgaccaggtaaagatcaatactttgactggtaagattttgggtttgtatttctctggctcatggtgtggtccatgtcgtcgtttcaccccaaatttggtggaggtctaccaggaccttgcttccaaaggggactttgaagttgtgtatgtctcttctgacaacccgaaaggcctgaaagacttgttcaaagtcaggggaattcctcatcttgttgttattgatgccaatgggaaggtttccactgataaagggactgtggttgtgagggagtatggtgtggaggggtatccgttcaccgcggagaagattagtttcttgaaagagcaagaggaggcggctaagaagaatcagtccttgagttctctcttggtttctaattctcgggattacttggtttcgagtgatgcgaataaggtgcctgtctctgaacttgaagggaagatggtgggtctctacttctcattgtctacattcagtccatgcatagaattcactccaaaacttgtggaggtttatgagaagctaaaagcaaagggagagagctttgagattgtgtttatatcacttgatgatgatgaagcagcatttgaacaagattgtaagaacatgccttggtttgcattgccccagaaggacaccaaaaccattaagaagctggctcggtattttgagctctcaaccttacccactttagttattattggggcagatggtaaaactgtccataacaatgttgttaaagctattgacgagcatgggcttctggcttaccctttcacacctgagaagtttgcagagctcgctgagttagagaaagcgaaagataaagcacaaactctggagtcaattttgatttatggggatcaaaactttgtcattggaaaagagtcaaaagacggaatcaagattccggtgtcagatcttgtggggaagaacatcctcctttatttctcagcacactggtgccctccatgccgtgcctttctaccaaaacttatggaagcctatcacaagatcaaggcaaaggatgatgcatttgaagttattttcatctctagtgacagggaccaagcctctttcgatgactttttctctggaatgccatggcttgctctgccctttggtgactcaagaaaggcatccttgagtcgccgattcaaggtccaaggcatccccatgcttgtagccattggtcctactggtcaaacagtcacaaaagaagcaagagatctcgttatgcttcatggagctaatgcttatcctttcactgaggagcggctgaaagagatagaagcagaatttaaggagatggcaaagaggtggcctgagaagttgaagaatgcactccatgaggagcatgagcttgtgctctctcgccgaagaagtttcatatgtgatgggtgcaacgagaaaggagatgtgtggtcattctattgcgaggagtgtgactttgatctccatccaaagtgtgctctggaggaagaaaatggaaccaaaactgatgccaagccggaagtagatccccatccaaagtgtgctttggaggaggaaaagggaaccaaaactgatgccaagccggaaaaagagccccaagaaggatgggtatgcgatggtgaagtttgtaaaaaagcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004791 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006935 GO:0008150 GO:0008152 GO:0009605 GO:0009636 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010035 GO:0010038 GO:0010183 GO:0010769 GO:0015036 GO:0016043 GO:0016049 GO:0016209 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0032501 GO:0032502 GO:0032989 GO:0040007 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0043900 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0045595 GO:0046686 GO:0048468 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0051716 GO:0055114 GO:0060284 GO:0060560 GO:0065007 GO:0070887 GO:0071840 GO:0080092 GO:0097237 GO:0098754 GO:0098869 GO:1990748 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C1_2 Thioredoxin_8

Protein Analysis

574

Amino Acids

64.39

Weight (kDa)

5.28

Isoelectric Point (pI)

32.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Redoxin	PF08534	26 - 115	4.4e-08	Redoxin
AhpC-TSA	PF00578	27 - 116	2.1e-09	AhpC/TSA family
Thioredoxin_8	PF13905	40 - 85	2.1e-11	Thioredoxin-like
Thioredoxin	PF00085	45 - 114	1e-08	Thioredoxin
Thioredoxin_8	PF13905	176 - 269	4.4e-22	Thioredoxin-like
AhpC-TSA	PF00578	327 - 419	1.4e-08	AhpC/TSA family
Redoxin	PF08534	327 - 424	1.1e-06	Redoxin
Thioredoxin_8	PF13905	340 - 432	3.6e-27	Thioredoxin-like
Thioredoxin_2	PF13098	340 - 430	1.3e-06	Thioredoxin-like domain
C1_2	PF03107	479 - 521	1.1e-08	C1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G70480 AT1G70480
fragaria_vesca	FvH4_4g34241 FvH4_4g34250 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260 FvH4_4g34260
malus_domestica	MD13G1093300.v1.1 MD13G1093500.v1.1 MD16G1094500.v1.1 MD16G1094600.v1.1 MD16G1094700.v1.1
prunus_persica	Prupe.1G251900_v2.0.a1 Prupe.1G252000_v2.0.a1
pyrus_communis	pycom13g08130 pycom13g08140 pycom16g08030 pycom16g08040 pycom16g08050
rosa_chinensis	RchiOBHm_Chr4g0443711 RchiOBHm_Chr6g0250421
rosa_laevigata	RLG00000005898 RLG00000005899 RLG00000005900
rosa_multiflora	Rmu_co8463221.1_g000001 Rmu_sc0001426.1_g000010 Rmu_sc0001426.1_g000011 Rmu_sc0001426.1_g000013 Rmu_sc0008739.1_g000001
rosa_roxburghii	Rroxscaffold_5G00384250 Rroxscaffold_5G00384260 Rroxscaffold_5G00384270
rosa_rugosa	Rorug05G0496400 Rorug05G0496500
rosa_samantha	Rh4AG406400 Rh4AG406500 Rh4AG406600 Rh4BG417400 Rh4BG417500 Rh4BG417600 Rh4BG417700 Rh4CG431900 Rh4DG413000
rosa_wichuraiana	Rw4G034900 Rw4G034910 Rw4G034920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	74
AccB1I	GGYRCC	2 cut(s)	505, 1053
AccBSI	CCGCTC	1 cut(s)	1366
AccI	GTMKAC	2 cut(s)	195, 557
AccII	CGCG	1 cut(s)	389
AciI	CCGC	4 cut(s)	387, 389, 425, 1366
AclWI	GGATC	2 cut(s)	960, 1604
AcsI	RAATTY	4 cut(s)	181, 288, 578, 1388
AfiI	CCNNNNNNNGG	4 cut(s)	63, 184, 1249, 1685
AgsI	TTSAA	8 cut(s)	227, 277, 409, 524, 680, 1130, 1249, 1426
AjnI	CCWGG	2 cut(s)	93, 198
AleI	CACNNNNGTG	1 cut(s)	1051
AluBI	AGCT	9 cut(s)	613, 633, 745, 763, 833, 889, 1340, 1453, 1721
AluI	AGCT	9 cut(s)	613, 633, 745, 763, 833, 889, 1340, 1453, 1721
Alw21I	GWGCWC	4 cut(s)	765, 891, 1461, 1564
Alw26I	GTCTC	3 cut(s)	244, 517, 545
AlwI	GGATC	2 cut(s)	960, 1604
Ama87I	CYCGRG	1 cut(s)	471
AoxI	GGCC	2 cut(s)	259, 1412
ApeKI	GCWGC	2 cut(s)	46, 671
ApoI	RAATTY	4 cut(s)	181, 288, 578, 1388
AspS9I	GGNCC	5 cut(s)	158, 202, 1156, 1252, 1283
AsuHPI	GGTGA	6 cut(s)	29, 43, 166, 376, 1226, 1715
AvaI	CYCGRG	1 cut(s)	471
AvaII	GGWCC	5 cut(s)	158, 202, 1156, 1252, 1283
BaeGI	GKGCMC	1 cut(s)	1058
BanI	GGYRCC	2 cut(s)	505, 1053
BanII	GRGCYC	3 cut(s)	765, 891, 1680
Bbv12I	GWGCWC	4 cut(s)	765, 891, 1461, 1564
BbvI	GCAGC	2 cut(s)	33, 683
BccI	CCATC	8 cut(s)	526, 794, 1393, 1481, 1557, 1623, 1683, 1694
BceAI	ACGGC	4 cut(s)	25, 37, 103, 1050
BcgI	CGANNNNNNTGC	2 cut(s)	487, 521
BciT130I	CCWGG	2 cut(s)	95, 200
BciVI	GTATCC	1 cut(s)	387
BcoDI	GTCTC	3 cut(s)	244, 517, 545
BfaI	CTAG	1 cut(s)	1146
BfuI	GTATCC	1 cut(s)	387
BglII	AGATCT	2 cut(s)	1009, 1318
BisI	GCNGC	4 cut(s)	47, 426, 672, 1367
BlsI	GCNGC	4 cut(s)	48, 427, 673, 1368
Bme1390I	CCNGG	2 cut(s)	95, 200
Bme18I	GGWCC	5 cut(s)	158, 202, 1156, 1252, 1283
BmeT110I	CYCGRG	1 cut(s)	471
BmgT120I	GGNCC	5 cut(s)	158, 202, 1156, 1252, 1283
BmiI	GGNNCC	5 cut(s)	507, 1055, 1157, 1582, 1648
BmrFI	CCNGG	2 cut(s)	95, 200
BmsI	GCATC	7 cut(s)	301, 484, 1111, 1238, 1269, 1582, 1648
BpmI	CTGGAG	2 cut(s)	950, 1586
BpuEI	CTTGAG	3 cut(s)	466, 1204, 1255
BsaBI	GATNNNNATC	2 cut(s)	1548, 1614
BsaI	GGTCTC	1 cut(s)	545
BsaJI	CCNNGG	4 cut(s)	387, 701, 1193, 1255
BsaWI	WCCGGW	1 cut(s)	1000
Bsc4I	CCNNNNNNNGG	4 cut(s)	63, 184, 1249, 1685
Bse1I	ACTGG	3 cut(s)	121, 1055, 1294
Bse3DI	GCAATG	1 cut(s)	710
Bse8I	GATNNNNATC	2 cut(s)	1548, 1614
BseBI	CCWGG	2 cut(s)	95, 200
BseDI	CCNNGG	4 cut(s)	387, 701, 1193, 1255
BseGI	GGATG	7 cut(s)	1026, 1123, 1229, 1260, 1549, 1615, 1694
BseJI	GATNNNNATC	2 cut(s)	1548, 1614
BseLI	CCNNNNNNNGG	4 cut(s)	63, 184, 1249, 1685
BseMI	GCAATG	1 cut(s)	710
BseMII	CTCAG	5 cut(s)	864, 885, 1056, 1350, 1407
BseNI	ACTGG	3 cut(s)	121, 1055, 1294
BseRI	GAGGAG	5 cut(s)	434, 1376, 1457, 1544, 1649
BseSI	GKGCMC	1 cut(s)	1058
BseXI	GCAGC	2 cut(s)	33, 683
Bsh1236I	CGCG	1 cut(s)	389
Bsh1285I	CGRYCG	1 cut(s)	64
BshFI	GGCC	2 cut(s)	261, 1414
BshNI	GGYRCC	2 cut(s)	505, 1053
BsiEI	CGRYCG	1 cut(s)	64
BsiHKAI	GWGCWC	4 cut(s)	765, 891, 1461, 1564
BsiHKCI	CYCGRG	1 cut(s)	471
BsiSI	CCGG	3 cut(s)	1001, 1601, 1667
BslFI	GGGAC	4 cut(s)	80, 233, 355, 1169
BslI	CCNNNNNNNGG	4 cut(s)	63, 184, 1249, 1685
BsmAI	GTCTC	3 cut(s)	244, 517, 545
BsmFI	GGGAC	4 cut(s)	80, 233, 355, 1169
BsmI	GAATGC	2 cut(s)	1194, 1435
BsnI	GGCC	2 cut(s)	261, 1414
Bso31I	GGTCTC	1 cut(s)	545
BsoBI	CYCGRG	1 cut(s)	471
Bsp1286I	GDGCHC	6 cut(s)	765, 891, 1058, 1461, 1564, 1680
Bsp143I	GATC	8 cut(s)	61, 102, 952, 1009, 1104, 1318, 1543, 1609
Bsp19I	CCATGG	1 cut(s)	1193
BspACI	CCGC	4 cut(s)	387, 389, 425, 1366
BspANI	GGCC	2 cut(s)	261, 1414
BspCNI	CTCAG	5 cut(s)	865, 886, 1055, 1351, 1408
BspFNI	CGCG	1 cut(s)	389
BspLI	GGNNCC	5 cut(s)	507, 1055, 1157, 1582, 1648
BspPI	GGATC	2 cut(s)	960, 1604
BspT107I	GGYRCC	2 cut(s)	505, 1053
BspTNI	GGTCTC	1 cut(s)	545
BsrBI	CCGCTC	1 cut(s)	1366
BsrDI	GCAATG	1 cut(s)	710
BsrI	ACTGG	3 cut(s)	121, 1055, 1294
BssECI	CCNNGG	4 cut(s)	387, 701, 1193, 1255
BssMI	GATC	8 cut(s)	61, 102, 952, 1009, 1104, 1318, 1543, 1609
BssT1I	CCWWGG	3 cut(s)	701, 1193, 1255
Bst2UI	CCWGG	2 cut(s)	95, 200
Bst4CI	ACNGT	4 cut(s)	17, 346, 811, 1300
Bst6I	CTCTTC	1 cut(s)	247
BstC8I	GCNNGC	3 cut(s)	747, 891, 1200
BstDEI	CTNAG	6 cut(s)	429, 873, 894, 1042, 1359, 1416
BstDSI	CCRYGG	2 cut(s)	387, 1193
BstF5I	GGATG	7 cut(s)	1026, 1123, 1229, 1260, 1549, 1615, 1694
BstFNI	CGCG	1 cut(s)	389
BstKTI	GATC	8 cut(s)	64, 105, 955, 1012, 1107, 1321, 1546, 1612
BstMAI	GTCTC	3 cut(s)	244, 517, 545
BstMBI	GATC	8 cut(s)	61, 102, 952, 1009, 1104, 1318, 1543, 1609
BstMCI	CGRYCG	1 cut(s)	64
BstMWI	GCNNNNNNNGC	3 cut(s)	890, 1062, 1204
BstNI	CCWGG	2 cut(s)	95, 200
BstNSI	RCATGY	1 cut(s)	700
BstSCI	CCNGG	2 cut(s)	93, 198
BstSLI	GKGCMC	1 cut(s)	1058
BstUI	CGCG	1 cut(s)	389
BstV1I	GCAGC	2 cut(s)	33, 683
BstX2I	RGATCY	3 cut(s)	1009, 1318, 1609
BstYI	RGATCY	3 cut(s)	1009, 1318, 1609
BsuI	GTATCC	1 cut(s)	387
BsuRI	GGCC	2 cut(s)	261, 1414
BtgI	CCRYGG	2 cut(s)	387, 1193
BtgZI	GCGATG	1 cut(s)	1713
BtsCI	GGATG	7 cut(s)	1026, 1123, 1229, 1260, 1549, 1615, 1694
BtsIMutI	CAGTG	3 cut(s)	330, 1048, 1356
Cac8I	GCNNGC	3 cut(s)	747, 891, 1200
Cfr13I	GGNCC	5 cut(s)	158, 202, 1156, 1252, 1283
Cfr42I	CCGCGG	1 cut(s)	390
CsiI	ACCWGGT	1 cut(s)	93
CspCI	CAANNNNNGTGG	4 cut(s)	168, 203, 576, 611
DdeI	CTNAG	6 cut(s)	429, 873, 894, 1042, 1359, 1416
DpnI	GATC	8 cut(s)	63, 104, 954, 1011, 1106, 1320, 1545, 1611
DpnII	GATC	8 cut(s)	61, 102, 952, 1009, 1104, 1318, 1543, 1609
DrdI	GACNNNNNNGTC	1 cut(s)	74
DseDI	GACNNNNNNGTC	1 cut(s)	74
Eam1104I	CTCTTC	1 cut(s)	247
EarI	CTCTTC	1 cut(s)	247
Ecl136II	GAGCTC	2 cut(s)	763, 889
Eco130I	CCWWGG	3 cut(s)	701, 1193, 1255
Eco147I	AGGCCT	1 cut(s)	261
Eco24I	GRGCYC	3 cut(s)	765, 891, 1680
Eco31I	GGTCTC	1 cut(s)	545
Eco47I	GGWCC	5 cut(s)	158, 202, 1156, 1252, 1283
Eco53kI	GAGCTC	2 cut(s)	763, 889
Eco88I	CYCGRG	1 cut(s)	471
EcoICRI	GAGCTC	2 cut(s)	763, 889
EcoO109I	RGGNCCY	1 cut(s)	202
EcoRI	GAATTC	2 cut(s)	288, 578
EcoRII	CCWGG	2 cut(s)	93, 198
EcoT14I	CCWWGG	3 cut(s)	701, 1193, 1255
EcoT22I	ATGCAT	2 cut(s)	575, 1126
EcoT38I	GRGCYC	3 cut(s)	765, 891, 1680
ErhI	CCWWGG	3 cut(s)	701, 1193, 1255
FalI	AAGNNNNNCTT	2 cut(s)	1217, 1249
FaqI	GGGAC	4 cut(s)	80, 233, 355, 1169
FauNDI	CATATG	1 cut(s)	1481
FblI	GTMKAC	2 cut(s)	195, 557
Fnu4HI	GCNGC	4 cut(s)	47, 426, 672, 1367
FokI	GGATG	7 cut(s)	1013, 1130, 1216, 1247, 1536, 1602, 1701
FriOI	GRGCYC	3 cut(s)	765, 891, 1680
Fsp4HI	GCNGC	4 cut(s)	47, 426, 672, 1367
FspBI	CTAG	1 cut(s)	1146
GluI	GCNGC	4 cut(s)	47, 426, 672, 1367
GsuI	CTGGAG	2 cut(s)	950, 1586
HaeIII	GGCC	2 cut(s)	261, 1414
HapII	CCGG	3 cut(s)	1001, 1601, 1667
HindIII	AAGCTT	1 cut(s)	1719
HinfI	GANTC	8 cut(s)	436, 932, 977, 990, 997, 1217, 1237, 1245
HpaII	CCGG	3 cut(s)	1001, 1601, 1667
HphI	GGTGA	6 cut(s)	29, 43, 166, 376, 1226, 1715
Hpy166II	GTNNAC	3 cut(s)	196, 384, 558
Hpy188I	TCNGA	4 cut(s)	58, 247, 517, 1009
Hpy188III	TCNNGA	9 cut(s)	32, 65, 406, 473, 929, 994, 1185, 1221, 1565
Hpy8I	GTNNAC	3 cut(s)	196, 384, 558
Hpy99I	CGWCG	3 cut(s)	17, 62, 171
HpyAV	CCTTC	4 cut(s)	316, 518, 715, 1679
HpyCH4III	ACNGT	4 cut(s)	17, 346, 811, 1300
HpyCH4V	TGCA	6 cut(s)	573, 710, 884, 1124, 1433, 1494
HpyF10VI	GCNNNNNNNGC	3 cut(s)	890, 1062, 1204
HpyF3I	CTNAG	6 cut(s)	429, 873, 894, 1042, 1359, 1416
KspI	CCGCGG	1 cut(s)	390
Kzo9I	GATC	8 cut(s)	61, 102, 952, 1009, 1104, 1318, 1543, 1609
LmnI	GCTCC	3 cut(s)	1337, 1363, 1444
Lsp1109I	GCAGC	2 cut(s)	33, 683
LweI	GCATC	7 cut(s)	301, 484, 1111, 1238, 1269, 1582, 1648
MabI	ACCWGGT	1 cut(s)	93
MaeI	CTAG	1 cut(s)	1146
MaeIII	GTNAC	7 cut(s)	17, 25, 80, 1148, 1214, 1300, 1535
MalI	GATC	8 cut(s)	63, 104, 954, 1011, 1106, 1320, 1545, 1611
MbiI	CCGCTC	1 cut(s)	1366
MboI	GATC	8 cut(s)	61, 102, 952, 1009, 1104, 1318, 1543, 1609
MboII	GAAGA	8 cut(s)	234, 406, 445, 541, 1033, 1438, 1482, 1583
MflI	RGATCY	3 cut(s)	1009, 1318, 1609
MhlI	GDGCHC	6 cut(s)	765, 891, 1058, 1461, 1564, 1680
MluCI	AATT	6 cut(s)	181, 288, 466, 578, 936, 1388
MlyI	GAGTC	4 cut(s)	941, 986, 1211, 1246
MmeI	TCCRAC	1 cut(s)	81
Mph1103I	ATGCAT	2 cut(s)	575, 1126
MseI	TTAA	4 cut(s)	738, 828, 1392, 1723
MslI	CAYNNNNRTG	3 cut(s)	819, 1051, 1265
MspA1I	CMGCKG	1 cut(s)	389
MspI	CCGG	3 cut(s)	1001, 1601, 1667
MspR9I	CCNGG	2 cut(s)	95, 200
Mva1269I	GAATGC	2 cut(s)	1194, 1435
MvaI	CCWGG	2 cut(s)	95, 200
MvnI	CGCG	1 cut(s)	389
MwoI	GCNNNNNNNGC	3 cut(s)	890, 1062, 1204
NcoI	CCATGG	1 cut(s)	1193
NdeI	CATATG	1 cut(s)	1481
NdeII	GATC	8 cut(s)	61, 102, 952, 1009, 1104, 1318, 1543, 1609
NlaIV	GGNNCC	5 cut(s)	507, 1055, 1157, 1582, 1648
NmuCI	GTSAC	5 cut(s)	17, 1148, 1214, 1300, 1535
NsiI	ATGCAT	2 cut(s)	575, 1126
NspI	RCATGY	1 cut(s)	700
OliI	CACNNNNGTG	1 cut(s)	1051
PceI	AGGCCT	1 cut(s)	261
PcsI	WCGNNNNNNNCGW	2 cut(s)	21, 494
PctI	GAATGC	2 cut(s)	1194, 1435
PfeI	GAWTC	4 cut(s)	436, 990, 997, 1245
PkrI	GCNGC	4 cut(s)	48, 427, 673, 1368
Ple19I	CGATCG	1 cut(s)	64
PleI	GAGTC	4 cut(s)	940, 985, 1211, 1245
PpsI	GAGTC	4 cut(s)	940, 985, 1211, 1245
PpuMI	RGGWCCY	1 cut(s)	202
Psp124BI	GAGCTC	2 cut(s)	765, 891
Psp5II	RGGWCCY	1 cut(s)	202
Psp6I	CCWGG	2 cut(s)	93, 198
PspGI	CCWGG	2 cut(s)	93, 198
PspN4I	GGNNCC	5 cut(s)	507, 1055, 1157, 1582, 1648
PspPI	GGNCC	5 cut(s)	158, 202, 1156, 1252, 1283
PspPPI	RGGWCCY	1 cut(s)	202
PsuI	RGATCY	3 cut(s)	1009, 1318, 1609
PvuI	CGATCG	1 cut(s)	64
RseI	CAYNNNNRTG	3 cut(s)	819, 1051, 1265
SacI	GAGCTC	2 cut(s)	765, 891
SacII	CCGCGG	1 cut(s)	390
SaqAI	TTAA	4 cut(s)	738, 828, 1392, 1723
SatI	GCNGC	4 cut(s)	47, 426, 672, 1367
Sau3AI	GATC	8 cut(s)	61, 102, 952, 1009, 1104, 1318, 1543, 1609
Sau96I	GGNCC	5 cut(s)	158, 202, 1156, 1252, 1283
SchI	GAGTC	4 cut(s)	941, 986, 1211, 1246
ScrFI	CCNGG	2 cut(s)	95, 200
SduI	GDGCHC	6 cut(s)	765, 891, 1058, 1461, 1564, 1680
SexAI	ACCWGGT	1 cut(s)	93
SfaNI	GCATC	7 cut(s)	301, 484, 1111, 1238, 1269, 1582, 1648
Sfr303I	CCGCGG	1 cut(s)	390
SgrBI	CCGCGG	1 cut(s)	390
SinI	GGWCC	5 cut(s)	158, 202, 1156, 1252, 1283
SmiMI	CAYNNNNRTG	3 cut(s)	819, 1051, 1265
SmlI	CTYRAG	3 cut(s)	445, 1219, 1234
SmoI	CTYRAG	3 cut(s)	445, 1219, 1234
Sse9I	AATT	6 cut(s)	181, 288, 466, 578, 936, 1388
SseBI	AGGCCT	1 cut(s)	261
SsiI	CCGC	4 cut(s)	387, 389, 425, 1366
SspMI	CTAG	1 cut(s)	1146
SstI	GAGCTC	2 cut(s)	765, 891
StuI	AGGCCT	1 cut(s)	261
StyD4I	CCNGG	2 cut(s)	93, 198
StyI	CCWWGG	3 cut(s)	701, 1193, 1255
TaaI	ACNGT	4 cut(s)	17, 346, 811, 1300
TaqI	TCGA	2 cut(s)	488, 1170
TasI	AATT	6 cut(s)	181, 288, 466, 578, 936, 1388
TauI	GCSGC	2 cut(s)	428, 1369
TfiI	GAWTC	4 cut(s)	436, 990, 997, 1245
Tru1I	TTAA	4 cut(s)	738, 828, 1392, 1723
Tru9I	TTAA	4 cut(s)	738, 828, 1392, 1723
TscAI	CASTG	3 cut(s)	337, 1055, 1363
TseFI	GTSAC	5 cut(s)	17, 1148, 1214, 1300, 1535
TseI	GCWGC	2 cut(s)	46, 671
Tsp45I	GTSAC	5 cut(s)	17, 1148, 1214, 1300, 1535
TspDTI	ATGAA	4 cut(s)	681, 1129, 1322, 1468
TspGWI	ACGGA	3 cut(s)	68, 369, 1002
TspRI	CASTG	3 cut(s)	337, 1055, 1363
VpaK11BI	GGWCC	5 cut(s)	158, 202, 1156, 1252, 1283
XapI	RAATTY	4 cut(s)	181, 288, 578, 1388
XceI	RCATGY	1 cut(s)	700
XcmI	CCANNNNNNNNNTGG	1 cut(s)	742
XmiI	GTMKAC	2 cut(s)	195, 557
XspI	CTAG	1 cut(s)	1146
Zsp2I	ATGCAT	2 cut(s)	575, 1126

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.