Rmu_sc0001731.1_g000013

Apoptosis antagonizing transcription factor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001731.1
Physical Location & Seq
Reverse (-)
55393 .. 60168
4776 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001731.1_g000013.1.cds

Sequence Viewer

Length: 1368 bp
atgaggcccgtacagtcccggcatttttcggttcgggatcggaccggccgtctttccccttcaaagcctcactcttctattgttttgcctgggcaatcacctgttttggtttctgaacaagacacaaggggctcagaagtaatgggaaagccttcaaagcggtcgagaaaggcgcctgaaagtgacagtgattttgaggacgatggtgatttggatagccatgagctaaatatggaggaagaggaggatgaatttgaggacgaggaggatgaaaaatctggtaatgaagaagaatccggtagcggagaagaagaggatgaagaagagggggaggaggaagaagataataaagatgctgagctggaagaccttgagaaacaatacatggatattcggcacgaagagcaagatattctcaagaatctaaagcatcacaagggtgaagatcttcttaaaggtcaagcactgaagaaccaaaaggctatctgggacaaaactcttgagttcagattcttgcttcagaaagcattctcaagttcaaatagattgccacaggagccagttaggtctctgttctgtggatcacatgaggatgtgaatgcagcatattccgatctagttacatcatcaaagaaaactttgaattctcttctggaactgcaagaggctttggttgaaaagaactcatctatcacacaagatgcaacaactggtaactctggacgatctaagcattcagaaccatctaagaacattggtgttgatggtgatgaggattggtcaaggatttctaactggctttcaagaatagctactttcagaaataaagaaattgacaaatggcaaacgagggcacaggtcaacacaggtgctgcttctattaaaggccgactacaagcttttaatcagagtattagccaacaagttgctgcctatatgagagatccaagcagaatggttaggcagatgcagatgaggcgatcagcagttggtgtatttgggactgttcttaaggggaaggatactccgacgggagaggaatcgcaatctgatgctgctgcccaagctgatggtgaccctgaacttttggatgactcggagttttaccagcaattactaaaagaattctttgagacaattgacccaacatcttctgagacggccttttattcactgaaaaagatgcagtctaagaagaggaagattgttgataggcgagcctcaaagagtcgtaagataaggtataatgttcatgagaagattgtaaatttcatggctccagagcctagggttcttcctcctatgttccctgacctcacttgtttgttcggaatgaagaactcaaaaccagcttctgtagtgcagtag

Protein Analysis

455

Amino Acids

51.56

Weight (kDa)

5.04

Isoelectric Point (pI)

63.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 172
AciI CCGC 2 cut(s) 160, 303
AclWI GGATC 3 cut(s) 45, 589, 938
AcoI YGGCCR 1 cut(s) 46
AcsI RAATTY 4 cut(s) 251, 643, 1124, 1267
AcuI CTGAAG 2 cut(s) 488, 503
AcyI GRCGYC 1 cut(s) 173
AfaI GTAC 1 cut(s) 12
AflII CTTAAG 1 cut(s) 1010
AgsI TTSAA 6 cut(s) 63, 156, 540, 643, 677, 804
AhdI GACNNNNNGTC 1 cut(s) 48
AjnI CCWGG 1 cut(s) 88
AleI CACNNNNGTG 1 cut(s) 438
AluBI AGCT 6 cut(s) 226, 361, 812, 899, 1067, 1352
AluI AGCT 6 cut(s) 226, 361, 812, 899, 1067, 1352
Alw26I GTCTC 3 cut(s) 573, 1127, 1151
AlwI GGATC 3 cut(s) 45, 589, 938
AlwNI CAGNNNCTG 2 cut(s) 872, 1355
AoxI GGCC 4 cut(s) 5, 46, 886, 1161
ApeKI GCWGC 5 cut(s) 602, 872, 929, 1055, 1058
ApoI RAATTY 4 cut(s) 251, 643, 1124, 1267
ArsI GACNNNNNNTTYG 2 cut(s) 176, 208
Asp700I GAANNNNTTC 3 cut(s) 151, 447, 527
AspA2I CCTAGG 1 cut(s) 1286
AspLEI GCGC 1 cut(s) 175
AspS9I GGNCC 2 cut(s) 6, 42
AsuC2I CCSGG 1 cut(s) 19
AsuHPI GGTGA 5 cut(s) 90, 218, 452, 779, 1085
AvaII GGWCC 1 cut(s) 42
AvrII CCTAGG 1 cut(s) 1286
BaeGI GKGCMC 1 cut(s) 856
BanI GGYRCC 1 cut(s) 172
BanII GRGCYC 1 cut(s) 134
BbsI GAAGAC 1 cut(s) 372
BbvI GCAGC 5 cut(s) 614, 859, 916, 1042, 1045
BccI CCATC 4 cut(s) 197, 751, 758, 1064
BceAI ACGGC 2 cut(s) 33, 1176
BciT130I CCWGG 1 cut(s) 90
BciVI GTATCC 1 cut(s) 1015
BcnI CCSGG 1 cut(s) 19
BcoDI GTCTC 3 cut(s) 573, 1127, 1151
BfaI CTAG 2 cut(s) 617, 1287
BfmI CTRYAG 1 cut(s) 1356
BfoI RGCGCY 1 cut(s) 176
BfrI CTTAAG 1 cut(s) 1010
BfuI GTATCC 1 cut(s) 1015
BglII AGATCT 1 cut(s) 445
BisI GCNGC 5 cut(s) 603, 873, 930, 1056, 1059
BlnI CCTAGG 1 cut(s) 1286
BlpI GCTNAGC 1 cut(s) 357
BlsI GCNGC 5 cut(s) 604, 874, 931, 1057, 1060
Bme1390I CCNGG 2 cut(s) 19, 90
Bme18I GGWCC 1 cut(s) 42
BmeRI GACNNNNNGTC 1 cut(s) 48
BmgT120I GGNCC 2 cut(s) 6, 42
BmiI GGNNCC 3 cut(s) 174, 558, 1278
BmrFI CCNGG 2 cut(s) 19, 90
BmsI GCATC 6 cut(s) 343, 439, 691, 957, 1042, 1173
BpiI GAAGAC 1 cut(s) 372
BpmI CTGGAG 1 cut(s) 1263
Bpu1102I GCTNAGC 1 cut(s) 357
BpuEI CTTGAG 4 cut(s) 392, 401, 517, 521
BpuMI CCSGG 1 cut(s) 19
BsaHI GRCGYC 1 cut(s) 173
BsaI GGTCTC 1 cut(s) 573
BsaJI CCNNGG 2 cut(s) 89, 1286
BsaWI WCCGGW 1 cut(s) 296
Bse118I RCCGGY 1 cut(s) 44
Bse1I ACTGG 3 cut(s) 560, 715, 800
BseBI CCWGG 1 cut(s) 90
BseDI CCNNGG 2 cut(s) 89, 1286
BseGI GGATG 5 cut(s) 253, 274, 322, 598, 1096
BseMII CTCAG 3 cut(s) 147, 348, 1146
BseNI ACTGG 3 cut(s) 560, 715, 800
BseRI GAGGAG 3 cut(s) 257, 278, 347
BseSI GKGCMC 1 cut(s) 856
BseX3I CGGCCG 1 cut(s) 46
BseXI GCAGC 5 cut(s) 614, 859, 916, 1042, 1045
Bsh1285I CGRYCG 2 cut(s) 49, 164
BshFI GGCC 4 cut(s) 7, 48, 888, 1163
BshNI GGYRCC 1 cut(s) 172
BsiEI CGRYCG 2 cut(s) 49, 164
BsiSI CCGG 3 cut(s) 19, 45, 297
BslFI GGGAC 2 cut(s) 503, 1015
BsmAI GTCTC 3 cut(s) 573, 1127, 1151
BsmBI CGTCTC 1 cut(s) 1151
BsmFI GGGAC 2 cut(s) 503, 1015
BsmI GAATGC 3 cut(s) 527, 604, 733
BsnI GGCC 4 cut(s) 7, 48, 888, 1163
Bso31I GGTCTC 1 cut(s) 573
Bsp1286I GDGCHC 2 cut(s) 134, 856
Bsp143I GATC 7 cut(s) 37, 445, 581, 613, 725, 943, 980
Bsp1720I GCTNAGC 1 cut(s) 357
BspACI CCGC 2 cut(s) 160, 303
BspANI GGCC 4 cut(s) 7, 48, 888, 1163
BspCNI CTCAG 3 cut(s) 146, 349, 1147
BspHI TCATGA 1 cut(s) 1252
BspLI GGNNCC 3 cut(s) 174, 558, 1278
BspPI GGATC 3 cut(s) 45, 589, 938
BspQI GCTCTTC 1 cut(s) 396
BspT107I GGYRCC 1 cut(s) 172
BspTI CTTAAG 1 cut(s) 1010
BspTNI GGTCTC 1 cut(s) 573
BsrFI RCCGGY 1 cut(s) 44
BsrI ACTGG 3 cut(s) 560, 715, 800
BssAI RCCGGY 1 cut(s) 44
BssECI CCNNGG 2 cut(s) 89, 1286
BssMI GATC 7 cut(s) 37, 445, 581, 613, 725, 943, 980
BssNI GRCGYC 1 cut(s) 173
BssT1I CCWWGG 1 cut(s) 1286
Bst2UI CCWGG 1 cut(s) 90
Bst4CI ACNGT 3 cut(s) 15, 188, 1006
Bst6I CTCTTC 7 cut(s) 79, 234, 306, 318, 396, 654, 1190
BstACI GRCGYC 1 cut(s) 173
BstAFI CTTAAG 1 cut(s) 1010
BstC8I GCNNGC 1 cut(s) 1218
BstDEI CTNAG 6 cut(s) 133, 357, 729, 747, 1155, 1191
BstEII GGTNACC 1 cut(s) 1073
BstF5I GGATG 5 cut(s) 253, 274, 322, 598, 1096
BstH2I RGCGCY 1 cut(s) 176
BstHHI GCGC 1 cut(s) 175
BstKTI GATC 7 cut(s) 40, 448, 584, 616, 728, 946, 983
BstMAI GTCTC 3 cut(s) 573, 1127, 1151
BstMBI GATC 7 cut(s) 37, 445, 581, 613, 725, 943, 980
BstMCI CGRYCG 2 cut(s) 49, 164
BstMWI GCNNNNNNNGC 5 cut(s) 157, 403, 556, 976, 1064
BstNI CCWGG 1 cut(s) 90
BstPI GGTNACC 1 cut(s) 1073
BstSCI CCNGG 2 cut(s) 17, 88
BstSFI CTRYAG 1 cut(s) 1356
BstSLI GKGCMC 1 cut(s) 856
BstV1I GCAGC 5 cut(s) 614, 859, 916, 1042, 1045
BstV2I GAAGAC 1 cut(s) 372
BstX2I RGATCY 2 cut(s) 445, 943
BstXI CCANNNNNNTGG 1 cut(s) 1070
BstYI RGATCY 2 cut(s) 445, 943
BstZI CGGCCG 1 cut(s) 46
BsuI GTATCC 1 cut(s) 1015
BsuRI GGCC 4 cut(s) 7, 48, 888, 1163
BtsCI GGATG 5 cut(s) 253, 274, 322, 598, 1096
BtsIMutI CAGTG 3 cut(s) 193, 464, 1172
Cac8I GCNNGC 1 cut(s) 1218
CaiI CAGNNNCTG 2 cut(s) 872, 1355
CciI TCATGA 1 cut(s) 1252
CfoI GCGC 1 cut(s) 175
Cfr10I RCCGGY 1 cut(s) 44
Cfr13I GGNCC 2 cut(s) 6, 42
CpoI CGGWCCG 1 cut(s) 42
Csp6I GTAC 1 cut(s) 11
CspI CGGWCCG 1 cut(s) 42
CviAII CATG 5 cut(s) 221, 385, 587, 1253, 1273
CviQI GTAC 1 cut(s) 11
DdeI CTNAG 6 cut(s) 133, 357, 729, 747, 1155, 1191
DinI GGCGCC 1 cut(s) 174
DpnI GATC 7 cut(s) 39, 447, 583, 615, 727, 945, 982
DpnII GATC 7 cut(s) 37, 445, 581, 613, 725, 943, 980
DriI GACNNNNNGTC 1 cut(s) 48
EaeI YGGCCR 1 cut(s) 46
EagI CGGCCG 1 cut(s) 46
Eam1104I CTCTTC 7 cut(s) 79, 234, 306, 318, 396, 654, 1190
Eam1105I GACNNNNNGTC 1 cut(s) 48
EarI CTCTTC 7 cut(s) 79, 234, 306, 318, 396, 654, 1190
EclXI CGGCCG 1 cut(s) 46
Eco130I CCWWGG 1 cut(s) 1286
Eco24I GRGCYC 1 cut(s) 134
Eco31I GGTCTC 1 cut(s) 573
Eco47I GGWCC 1 cut(s) 42
Eco52I CGGCCG 1 cut(s) 46
Eco57I CTGAAG 2 cut(s) 488, 503
Eco91I GGTNACC 1 cut(s) 1073
EcoO65I GGTNACC 1 cut(s) 1073
EcoRI GAATTC 2 cut(s) 643, 1124
EcoRII CCWGG 1 cut(s) 88
EcoT14I CCWWGG 1 cut(s) 1286
EcoT38I GRGCYC 1 cut(s) 134
EgeI GGCGCC 1 cut(s) 174
EheI GGCGCC 1 cut(s) 174
ErhI CCWWGG 1 cut(s) 1286
Esp3I CGTCTC 1 cut(s) 1151
FaeI CATG 5 cut(s) 224, 388, 590, 1256, 1276
FalI AAGNNNNNCTT 2 cut(s) 435, 467
FaqI GGGAC 2 cut(s) 503, 1015
FatI CATG 5 cut(s) 220, 384, 586, 1252, 1272
Fnu4HI GCNGC 5 cut(s) 603, 873, 930, 1056, 1059
FokI GGATG 5 cut(s) 260, 281, 329, 605, 1103
FriOI GRGCYC 1 cut(s) 134
Fsp4HI GCNGC 5 cut(s) 603, 873, 930, 1056, 1059
FspBI CTAG 2 cut(s) 617, 1287
GlaI GCGC 1 cut(s) 174
GluI GCNGC 5 cut(s) 603, 873, 930, 1056, 1059
GsuI CTGGAG 1 cut(s) 1263
HaeII RGCGCY 1 cut(s) 176
HaeIII GGCC 4 cut(s) 7, 48, 888, 1163
HapII CCGG 3 cut(s) 19, 45, 297
HhaI GCGC 1 cut(s) 175
Hin1I GRCGYC 1 cut(s) 173
Hin1II CATG 5 cut(s) 224, 388, 590, 1256, 1276
Hin6I GCGC 1 cut(s) 173
HinP1I GCGC 1 cut(s) 173
HincII GTYRAC 1 cut(s) 862
HindII GTYRAC 1 cut(s) 862
HindIII AAGCTT 1 cut(s) 897
HinfI GANTC 6 cut(s) 293, 421, 510, 1040, 1094, 1228
HpaII CCGG 3 cut(s) 19, 45, 297
HphI GGTGA 5 cut(s) 90, 218, 452, 779, 1085
Hpy166II GTNNAC 1 cut(s) 862
Hpy188III TCNNGA 9 cut(s) 35, 165, 418, 500, 653, 720, 804, 1253, 1280
Hpy8I GTNNAC 1 cut(s) 862
Hpy99I CGWCG 1 cut(s) 1033
HpyAV CCTTC 3 cut(s) 69, 162, 1012
HpyCH4III ACNGT 3 cut(s) 15, 188, 1006
HpyCH4V TGCA 6 cut(s) 602, 661, 704, 970, 1186, 1363
HpyF10VI GCNNNNNNNGC 5 cut(s) 157, 403, 556, 976, 1064
HpyF3I CTNAG 6 cut(s) 133, 357, 729, 747, 1155, 1191
Hsp92I GRCGYC 1 cut(s) 173
Hsp92II CATG 5 cut(s) 224, 388, 590, 1256, 1276
HspAI GCGC 1 cut(s) 173
KasI GGCGCC 1 cut(s) 172
Kzo9I GATC 7 cut(s) 37, 445, 581, 613, 725, 943, 980
LguI GCTCTTC 1 cut(s) 396
LmnI GCTCC 2 cut(s) 556, 1282
Lsp1109I GCAGC 5 cut(s) 614, 859, 916, 1042, 1045
LweI GCATC 6 cut(s) 343, 439, 691, 957, 1042, 1173
MaeI CTAG 2 cut(s) 617, 1287
MaeIII GTNAC 4 cut(s) 182, 619, 713, 1073
MalI GATC 7 cut(s) 39, 447, 583, 615, 727, 945, 982
MboI GATC 7 cut(s) 37, 445, 581, 613, 725, 943, 980
MfeI CAATTG 1 cut(s) 1137
MflI RGATCY 2 cut(s) 445, 943
MhlI GDGCHC 2 cut(s) 134, 856
MluCI AATT 7 cut(s) 251, 643, 831, 1112, 1124, 1137, 1267
Mly113I GGCGCC 1 cut(s) 173
MlyI GAGTC 2 cut(s) 1088, 1237
MmeI TCCRAC 1 cut(s) 1052
MroXI GAANNNNTTC 3 cut(s) 151, 447, 527
MseI TTAA 4 cut(s) 453, 882, 903, 1011
MslI CAYNNNNRTG 2 cut(s) 438, 591
MspCI CTTAAG 1 cut(s) 1010
MspI CCGG 3 cut(s) 19, 45, 297
MspR9I CCNGG 2 cut(s) 19, 90
MunI CAATTG 1 cut(s) 1137
Mva1269I GAATGC 3 cut(s) 527, 604, 733
MvaI CCWGG 1 cut(s) 90
MwoI GCNNNNNNNGC 5 cut(s) 157, 403, 556, 976, 1064
NarI GGCGCC 1 cut(s) 173
NciI CCSGG 1 cut(s) 19
NdeII GATC 7 cut(s) 37, 445, 581, 613, 725, 943, 980
NlaIII CATG 5 cut(s) 224, 388, 590, 1256, 1276
NlaIV GGNNCC 3 cut(s) 174, 558, 1278
NmuCI GTSAC 2 cut(s) 182, 1073
OliI CACNNNNGTG 1 cut(s) 438
PagI TCATGA 1 cut(s) 1252
PciSI GCTCTTC 1 cut(s) 396
PcsI WCGNNNNNNNCGW 1 cut(s) 46
PctI GAATGC 3 cut(s) 527, 604, 733
PdmI GAANNNNTTC 3 cut(s) 151, 447, 527
PfeI GAWTC 4 cut(s) 293, 421, 510, 1040
PkrI GCNGC 5 cut(s) 604, 874, 931, 1057, 1060
PleI GAGTC 2 cut(s) 1088, 1236
PluTI GGCGCC 1 cut(s) 176
PpsI GAGTC 2 cut(s) 1088, 1236
Psp6I CCWGG 1 cut(s) 88
PspEI GGTNACC 1 cut(s) 1073
PspGI CCWGG 1 cut(s) 88
PspN4I GGNNCC 3 cut(s) 174, 558, 1278
PspPI GGNCC 2 cut(s) 6, 42
PstNI CAGNNNCTG 2 cut(s) 872, 1355
PsuI RGATCY 2 cut(s) 445, 943
RsaI GTAC 1 cut(s) 12
RsaNI GTAC 1 cut(s) 11
RseI CAYNNNNRTG 2 cut(s) 438, 591
Rsr2I CGGWCCG 1 cut(s) 42
RsrII CGGWCCG 1 cut(s) 42
SapI GCTCTTC 1 cut(s) 396
SaqAI TTAA 4 cut(s) 453, 882, 903, 1011
SatI GCNGC 5 cut(s) 603, 873, 930, 1056, 1059
Sau3AI GATC 7 cut(s) 37, 445, 581, 613, 725, 943, 980
Sau96I GGNCC 2 cut(s) 6, 42
SchI GAGTC 2 cut(s) 1088, 1237
ScrFI CCNGG 2 cut(s) 19, 90
SduI GDGCHC 2 cut(s) 134, 856
SfaNI GCATC 6 cut(s) 343, 439, 691, 957, 1042, 1173
SfcI CTRYAG 1 cut(s) 1356
SfoI GGCGCC 1 cut(s) 174
SinI GGWCC 1 cut(s) 42
SmiMI CAYNNNNRTG 2 cut(s) 438, 591
SmlI CTYRAG 5 cut(s) 371, 416, 500, 532, 1010
SmoI CTYRAG 5 cut(s) 371, 416, 500, 532, 1010
Sse9I AATT 7 cut(s) 251, 643, 831, 1112, 1124, 1137, 1267
SsiI CCGC 2 cut(s) 160, 303
SspDI GGCGCC 1 cut(s) 172
SspMI CTAG 2 cut(s) 617, 1287
StyD4I CCNGG 2 cut(s) 17, 88
StyI CCWWGG 1 cut(s) 1286
TaaI ACNGT 3 cut(s) 15, 188, 1006
TaqI TCGA 1 cut(s) 164
TasI AATT 7 cut(s) 251, 643, 831, 1112, 1124, 1137, 1267
TfiI GAWTC 4 cut(s) 293, 421, 510, 1040
Tru1I TTAA 4 cut(s) 453, 882, 903, 1011
Tru9I TTAA 4 cut(s) 453, 882, 903, 1011
TscAI CASTG 3 cut(s) 193, 471, 1179
TseFI GTSAC 2 cut(s) 182, 1073
TseI GCWGC 5 cut(s) 602, 872, 929, 1055, 1058
Tsp45I GTSAC 2 cut(s) 182, 1073
TspDTI ATGAA 7 cut(s) 264, 285, 300, 333, 1241, 1261, 1349
TspRI CASTG 3 cut(s) 193, 471, 1179
Vha464I CTTAAG 1 cut(s) 1010
VpaK11BI GGWCC 1 cut(s) 42
XapI RAATTY 4 cut(s) 251, 643, 1124, 1267
XmaJI CCTAGG 1 cut(s) 1286
XmnI GAANNNNTTC 3 cut(s) 151, 447, 527
XspI CTAG 2 cut(s) 617, 1287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.