Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010327.1

Orthogroup ID

OG0000666

Physical Location & Seq

Genomic Coordinates Forward (+)

7899 .. 18104

Gene Structure 10206 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010327.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3321 bp

atgggagcgggaaggaaaactgagacctatactctgccttctaatcaagacctggtaccctatgctgtgtctgcaagaaatttgatgaagaatcacctaggtgcagtcatctttgggtgcacgcacagcacaatgaatgaatgtctatcaaaacaactctttggtttaccggctccacaccttatatatgtgaagaaagttacacctggcttaccactatttctgttcaactatagtgacaggaagctatatggtatctttgaggctactggtcatggccaaatgaatattgacccatacggatggaccgctgatgggtcagggaggacccaatttcctgcacaggttcggatgcgtgttcggcagcagtgccgaccactgcttgaaagccagtttaaaccaataattgctgataactacttcaatccacagcatttcatgtttgagcttgatcatgttcaaacaagaaatctgctatctctgctagcaccattgacaatttctccaggtaaaccaacaccacagaatccaatgctgagggaaactgattttcaagctcttccatcatctagtacaatacagaaagctgaatcgtgtaagccgcccacttcagaggctgagaatcctactcctctacccaactgggaaaccgattttccagctcttccgactcagaatacaatacagaaaactgaattgttgaaaccacccacttcaggggctgagaatttgaattctgtacccacagtgaactgggaaactgagtttccagctcttccatcacgtaatacattacaaaagaaagctgtattgtgtaaaccagccacttctgtaccacagaatagagtggagctggaaactgatattccaactcttccctcaagtagcacggtagtggaacctgaatggccttatcaacttacttcacaggctgagcatctgaacagttcacatcttaaagggggttcgacatgttctacacctcagaatacagtgaagtgggaagctgattttccagattttccctcaattaacataatacaggaacctgaatggcttgaagcacttatttcagaggctgagtatttgaatagttcaaatctgaaattggattctgtacctttggctggagatgctgtagatagtaaggcagagagtccattctcccagtttgatcagaagagtggagagagttcttgctacttttctgcgcagagtcctggatccatgttctatccggggatcattactaagttgcttctagaggtgcaagagctgaaggcgtctagtactgcacagactgagaagatgagatatttggaggataagctgtttggttccagaactcatgtcagcatacaaattcgttcaggtttaccgggtccacacttttcatatgtgaagaatattagtcctggcttgcccctctttctcttcaactataacgataggacgcttcatggaatttatgaggctgctagccatggccaaatgaatattgatccatatggttggacaactgatggatcagtgagaacacaatttcctgcacaggttcagattcgtgtccagctgcagtgccaaccattgcttgagagtcagtttaaactgattattgcggacaactactacagtgcaaataaattctggtttgagcttgatcatgctcagacagacaagctgatgtctttgttagcatcttgcccaatcgctccaggtattaaagtaccgcagaaaataccaaagaggaaaactgatcttccaatgcaaccctcacgtaagacaacagtggaagctcagtggcttaaaccactcacttcaggggcgaaaacactagttggaaactacaatccatctgaagctgtattagatgtgaaagacgctgaacaagaagaacagcacctcatttgcgcaaaactgaaagagttgtctcttcaacgtgatctcaacagtgaataccaaaatgtgcctttgtcaatagatgttaaagatagtgctattgttaatgcaacgcctgtagcggtcaattggaatccacctgaaccattgggtttagtggagatgagggtagagaggtctcattcctggtctgggaagaagagtggagggagtccttgctcattgtctgcgctgagtcctcgatcctcgtctgatcagtcacaaatcgataagttggttcaagaggttgaagagttaaaagctttcaagaatgaacaagctaagaagataggctatttggagcataagctggagcaggcacagtttgaaattaaacagttaaaagatggtataaagtcggaatctgagtctacaccatcccttgcacatattgatgaaaagcagtcagagtctgagattcagttaaaagacggtatgaagttggaatgtgagtctgtaccctccacacaagagaaggatattgcatcgtgcgatatgctggatctggatcctaatgagtcaatatatctagttggaggatctgatggtgaatcatggttgtcattggattcttattatccttctcgaaatgtgataaaatctcttggaccaatgagctcagatcgtggatatgcttctgttgcaaaattaaatggtgatctctatgtgattggaggtggtgctagtgctgtaggtggtgatggtgctgtgtggtatgatacagttgaatcatactgccctgctgacgagcagtggaaggtctgcccttctttgagagagaaaaaggggagcttagctgcagctaccacaaacaataaaatttttgcaatgggtggcggcaatggaattgagtgcttttctgatgttgaaatgcttgatttagatgttggtcgatggatccgtacacagtcaatgctacaaaagagatttgctctcgctgcggcagaactaaatggagtaatatacgctactggagggtatgatgggaatggttatttgaagtccgttgatagatttgatccaagggagcatagttggaagaaagtcccttgtatgaaatcagaaaggggttgccattcattggttacattaaatgaaaaattgtatgctctgggtggtcatgatggagattctatggtgtcaagtgtagaaatttttgacccacgccttgagtcatggatgcctggggaaccaatgaactactctaggggatattcggctgcggctgttgttaatgataccatctatgtaattggaggggtgaaaggggataccagcattgcagaggctgttgaatgctacaaggagggccaaggttggcaagaaatgacgggggtgattagcaaaaggtgcttcctgtcggccactgcttactcgacctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005856 GO:0008150 GO:0008582 GO:0040008 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044087 GO:0044424 GO:0044464 GO:0045886 GO:0045926 GO:0048519 GO:0048523 GO:0048638 GO:0048640 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050807 GO:0051093 GO:0051128 GO:0051129 GO:0051239 GO:0051241 GO:0051960 GO:0051961 GO:0051963 GO:0051964 GO:0065007 GO:0065008 GO:1904396 GO:1904397 GO:1905809 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dev_Cell_Death Kelch_1 Kelch_5

Protein Analysis

1106

Amino Acids

122.2

Weight (kDa)

5.36

Isoelectric Point (pI)

43.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01660 AT5G01660 AT5G01660
fragaria_vesca	FvH4_6g10590 FvH4_6g10591 FvH4_6g10591 FvH4_6g10591
malus_domestica	MD04G1166900.v1.1 MD12G1180200.v1.1 MD12G1180500.v1.1
prunus_persica	Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285200_v2.0.a1 Prupe.6G285200_v2.0.a1 Prupe.6G285200_v2.0.a1
pyrus_communis	pycom04g14830 pycom12g16990
rosa_chinensis	RchiOBHm_Chr2g0145311 RchiOBHm_Chr3g0461571 RchiOBHm_Chr3g0461581
rosa_laevigata	RLG00000024916 RLG00000024917
rosa_multiflora	Rmu_sc0000790.1_g000001 Rmu_sc0003979.1_g000002 Rmu_sc0006964.1_g000002 Rmu_sc0010327.1_g000003 Rmu_ssc0000193.1_g000005 Rmu_ssc0000193.1_g000006
rosa_roxburghii	Rroxscaffold_4G00330190 Rroxscaffold_6G00418120 Rroxscaffold_6G00418130 Rroxscaffold_6G00418490 Rroxscaffold_6G00418500
rosa_rugosa	Rorug01G0017200 Rorug01G0017900 Rorug03G0051900 Rorug03G0052000 Rorug03G0052000 Rorug03G0052100
rosa_samantha	Rh1CG027200 Rh1CG027400 Rh1CG027500 Rh1CG027700 Rh1CG073300 Rh1CG101500 Rh1CG101600 Rh1DG042300 Rh1DG042800 Rh3AG110200 Rh3AG110300 Rh3BG113400 Rh3BG113500 Rh3CG115300 Rh3CG115400 Rh3DG115100 Rh3DG115200 Rh5AG167800 Rh5BG556300 Rh5CG579000 Rh6AG136600 Rh7DG359300
rosa_wichuraiana	Rw1G002200 Rw1G002230 Rw3G009320 Rw3G009330 Rw7G020340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1212, 1912
Acc65I	GGTACC	1 cut(s)	55
AccB1I	GGYRCC	1 cut(s)	55
AccB7I	CCANNNNNTGG	1 cut(s)	3019
AccBSI	CCGCTC	1 cut(s)	8
AccI	GTMKAC	1 cut(s)	2309
AciI	CCGC	9 cut(s)	8, 309, 602, 1619, 1730, 2021, 2775, 2879, 3161
AcoI	YGGCCR	3 cut(s)	277, 1486, 3300
AcsI	RAATTY	8 cut(s)	79, 727, 733, 1362, 1464, 1643, 2757, 3090
AcuI	CTGAAG	5 cut(s)	594, 699, 1298, 1803, 1878
AcyI	GRCGYC	1 cut(s)	1283
AfaI	GTAC	9 cut(s)	57, 574, 741, 834, 1119, 1291, 1728, 2397, 2842
AfiI	CCNNNNNNNGG	6 cut(s)	315, 716, 717, 1127, 2091, 3019
AflIII	ACRYGT	1 cut(s)	971
AhlI	ACTAGT	1 cut(s)	1834
AjnI	CCWGG	8 cut(s)	51, 205, 505, 1219, 1414, 1714, 2084, 3121
AleI	CACNNNNGTG	2 cut(s)	99, 893
AloI	GAACNNNNNNTCC	2 cut(s)	1528, 1560
Alw21I	GWGCWC	2 cut(s)	122, 2558
Alw26I	GTCTC	3 cut(s)	17, 1935, 2082
Alw44I	GTGCAC	1 cut(s)	118
AlwNI	CAGNNNCTG	5 cut(s)	617, 722, 1079, 2351, 3227
AoxI	GGCC	5 cut(s)	277, 908, 1486, 3247, 3300
ApaLI	GTGCAC	1 cut(s)	118
ApeKI	GCWGC	7 cut(s)	364, 1475, 1573, 2735, 2738, 2876, 3158
ApoI	RAATTY	8 cut(s)	79, 727, 733, 1362, 1464, 1643, 2757, 3090
Asp718I	GGTACC	1 cut(s)	55
AspA2I	CCTAGG	1 cut(s)	97
AspLEI	GCGC	3 cut(s)	1213, 1913, 2131
AspS9I	GGNCC	5 cut(s)	306, 327, 1382, 2546, 3247
AsuC2I	CCSGG	2 cut(s)	1239, 1380
AsuHPI	GGTGA	6 cut(s)	86, 2498, 2606, 2648, 3211, 3286
AsuNHI	GCTAGC	2 cut(s)	484, 1478
AvaII	GGWCC	4 cut(s)	306, 327, 1382, 2546
AvrII	CCTAGG	1 cut(s)	97
BaeGI	GKGCMC	1 cut(s)	122
BaeI	ACNNNNGTAYC	2 cut(s)	816, 849
BalI	TGGCCA	2 cut(s)	279, 1488
BamHI	GGATCC	3 cut(s)	1223, 2446, 2835
BanI	GGYRCC	1 cut(s)	55
BanII	GRGCYC	1 cut(s)	2558
Bbv12I	GWGCWC	2 cut(s)	122, 2558
BbvCI	CCTCAGC	1 cut(s)	536
BbvI	GCAGC	7 cut(s)	376, 1462, 1560, 2722, 2750, 2863, 3145
BciT130I	CCWGG	8 cut(s)	53, 207, 507, 1221, 1416, 1716, 2086, 3123
BciVI	GTATCC	1 cut(s)	3202
BclI	TGATCA	4 cut(s)	451, 1174, 1660, 2152
BcnI	CCSGG	2 cut(s)	1239, 1380
BcoDI	GTCTC	3 cut(s)	17, 1935, 2082
BcuI	ACTAGT	1 cut(s)	1834
BfmI	CTRYAG	7 cut(s)	232, 1137, 1574, 1630, 2016, 2628, 2736
BfuI	GTATCC	1 cut(s)	3202
BlnI	CCTAGG	1 cut(s)	97
BlpI	GCTNAGC	2 cut(s)	933, 2731
BmcAI	AGTACT	1 cut(s)	1291
Bme18I	GGWCC	4 cut(s)	306, 327, 1382, 2546
BmgT120I	GGNCC	5 cut(s)	306, 327, 1382, 2546, 3247
BmrI	ACTGGG	3 cut(s)	652, 763, 1162
BmsI	GCATC	6 cut(s)	342, 946, 1123, 1706, 2432, 3108
BmtI	GCTAGC	2 cut(s)	488, 1482
BmuI	ACTGGG	3 cut(s)	652, 763, 1162
BplI	GAGNNNNNCTC	2 cut(s)	2854, 2886
BpmI	CTGGAG	5 cut(s)	489, 1149, 1698, 2270, 2931
Bpu10I	CCTNAGC	1 cut(s)	536
Bpu1102I	GCTNAGC	2 cut(s)	933, 2731
BpuEI	CTTGAG	3 cut(s)	865, 1613, 3128
BpuMI	CCSGG	2 cut(s)	1239, 1380
Bsa29I	ATCGAT	1 cut(s)	2166
BsaAI	YACGTR	2 cut(s)	785, 1778
BsaBI	GATNNNNATC	1 cut(s)	2445
BsaHI	GRCGYC	1 cut(s)	1283
BsaI	GGTCTC	2 cut(s)	17, 2082
BsaJI	CCNNGG	6 cut(s)	97, 1238, 1483, 2960, 3122, 3250
BsaXI	ACNNNNNCTCC	4 cut(s)	487, 517, 1122, 1152
Bsc4I	CCNNNNNNNGG	6 cut(s)	315, 716, 717, 1127, 2091, 3019
Bse118I	RCCGGY	1 cut(s)	169
Bse1I	ACTGG	6 cut(s)	274, 391, 647, 758, 1168, 2914
Bse3DI	GCAATG	4 cut(s)	1586, 2772, 2785, 3216
Bse8I	GATNNNNATC	1 cut(s)	2445
BseBI	CCWGG	8 cut(s)	53, 207, 507, 1221, 1416, 1716, 2086, 3123
BseCI	ATCGAT	1 cut(s)	2166
BseDI	CCNNGG	6 cut(s)	97, 1238, 1483, 2960, 3122, 3250
BseGI	GGATG	4 cut(s)	308, 357, 2315, 3123
BseJI	GATNNNNATC	1 cut(s)	2445
BseLI	CCNNNNNNNGG	6 cut(s)	315, 716, 717, 1127, 2091, 3019
BseMI	GCAATG	4 cut(s)	1586, 2772, 2785, 3216
BseNI	ACTGG	6 cut(s)	274, 391, 647, 758, 1168, 2914
BseRI	GAGGAG	1 cut(s)	621
BseSI	GKGCMC	1 cut(s)	122
BseXI	GCAGC	7 cut(s)	376, 1462, 1560, 2722, 2750, 2863, 3145
BsgI	GTGCAG	4 cut(s)	123, 324, 1278, 1533
BshFI	GGCC	5 cut(s)	279, 910, 1488, 3249, 3302
BshNI	GGYRCC	1 cut(s)	55
BshVI	ATCGAT	1 cut(s)	2166
BsiHKAI	GWGCWC	2 cut(s)	122, 2558
BsiSI	CCGG	3 cut(s)	170, 1238, 1379
BslFI	GGGAC	1 cut(s)	2969
BslI	CCNNNNNNNGG	6 cut(s)	315, 716, 717, 1127, 2091, 3019
BsmAI	GTCTC	3 cut(s)	17, 1935, 2082
BsmFI	GGGAC	1 cut(s)	2969
BsmI	GAATGC	1 cut(s)	3239
BsnI	GGCC	5 cut(s)	279, 910, 1488, 3249, 3302
Bso31I	GGTCTC	2 cut(s)	17, 2082
Bsp1286I	GDGCHC	2 cut(s)	122, 2558
Bsp1720I	GCTNAGC	2 cut(s)	933, 2731
Bsp19I	CCATGG	1 cut(s)	1483
BspACI	CCGC	9 cut(s)	8, 309, 602, 1619, 1730, 2021, 2775, 2879, 3161
BspANI	GGCC	5 cut(s)	279, 910, 1488, 3249, 3302
BspDI	ATCGAT	1 cut(s)	2166
BspHI	TCATGA	1 cut(s)	3058
BspMAI	CTGCAG	2 cut(s)	1578, 2740
BspOI	GCTAGC	2 cut(s)	488, 1482
BspQI	GCTCTTC	3 cut(s)	564, 669, 780
BspT107I	GGYRCC	1 cut(s)	55
BspTNI	GGTCTC	2 cut(s)	17, 2082
BsrBI	CCGCTC	1 cut(s)	8
BsrDI	GCAATG	4 cut(s)	1586, 2772, 2785, 3216
BsrFI	RCCGGY	1 cut(s)	169
BsrI	ACTGG	6 cut(s)	274, 391, 647, 758, 1168, 2914
BssAI	RCCGGY	1 cut(s)	169
BssECI	CCNNGG	6 cut(s)	97, 1238, 1483, 2960, 3122, 3250
BssNI	GRCGYC	1 cut(s)	1283
BssT1I	CCWWGG	4 cut(s)	97, 1483, 2960, 3250
Bst2UI	CCWGG	8 cut(s)	53, 207, 507, 1221, 1416, 1716, 2086, 3123
Bst6I	CTCTTC	9 cut(s)	564, 669, 780, 879, 1175, 1439, 1938, 2093, 2184
BstACI	GRCGYC	1 cut(s)	1283
BstAPI	GCANNNNNTGC	1 cut(s)	3288
BstBAI	YACGTR	2 cut(s)	785, 1778
BstC8I	GCNNGC	5 cut(s)	122, 486, 1421, 1480, 2256
BstDSI	CCRYGG	1 cut(s)	1483
BstF5I	GGATG	4 cut(s)	308, 357, 2315, 3123
BstHHI	GCGC	3 cut(s)	1213, 1913, 2131
BstMAI	GTCTC	3 cut(s)	17, 1935, 2082
BstMWI	GCNNNNNNNGC	8 cut(s)	71, 126, 361, 481, 1133, 2579, 2876, 3288
BstNI	CCWGG	8 cut(s)	53, 207, 507, 1221, 1416, 1716, 2086, 3123
BstNSI	RCATGY	1 cut(s)	975
BstSFI	CTRYAG	7 cut(s)	232, 1137, 1574, 1630, 2016, 2628, 2736
BstSLI	GKGCMC	1 cut(s)	122
BstV1I	GCAGC	7 cut(s)	376, 1462, 1560, 2722, 2750, 2863, 3145
BstX2I	RGATCY	5 cut(s)	1223, 2440, 2446, 2477, 2835
BstXI	CCANNNNNNTGG	2 cut(s)	303, 1512
BstYI	RGATCY	5 cut(s)	1223, 2440, 2446, 2477, 2835
Bsu15I	ATCGAT	1 cut(s)	2166
BsuI	GTATCC	1 cut(s)	3202
BsuRI	GGCC	5 cut(s)	279, 910, 1488, 3249, 3302
BsuTUI	ATCGAT	1 cut(s)	2166
BtgI	CCRYGG	1 cut(s)	1483
BtsCI	GGATG	4 cut(s)	308, 357, 2315, 3123
BtsI	GCAGTG	5 cut(s)	374, 377, 1583, 2696, 3303
Cac8I	GCNNGC	5 cut(s)	122, 486, 1421, 1480, 2256
CaiI	CAGNNNCTG	5 cut(s)	617, 722, 1079, 2351, 3227
CciI	TCATGA	1 cut(s)	3058
CfoI	GCGC	3 cut(s)	1213, 1913, 2131
Cfr10I	RCCGGY	1 cut(s)	169
Cfr13I	GGNCC	5 cut(s)	306, 327, 1382, 2546, 3247
ClaI	ATCGAT	1 cut(s)	2166
CseI	GACGC	3 cut(s)	1272, 1462, 1889
CsiI	ACCWGGT	1 cut(s)	51
Csp6I	GTAC	9 cut(s)	56, 573, 740, 833, 1118, 1290, 1727, 2396, 2841
CviQI	GTAC	9 cut(s)	56, 573, 740, 833, 1118, 1290, 1727, 2396, 2841
DraI	TTTAAA	2 cut(s)	397, 1606
EaeI	YGGCCR	3 cut(s)	277, 1486, 3300
Eam1104I	CTCTTC	9 cut(s)	564, 669, 780, 879, 1175, 1439, 1938, 2093, 2184
EarI	CTCTTC	9 cut(s)	564, 669, 780, 879, 1175, 1439, 1938, 2093, 2184
Ecl136II	GAGCTC	1 cut(s)	2556
Eco130I	CCWWGG	4 cut(s)	97, 1483, 2960, 3250
Eco24I	GRGCYC	1 cut(s)	2558
Eco31I	GGTCTC	2 cut(s)	17, 2082
Eco47I	GGWCC	4 cut(s)	306, 327, 1382, 2546
Eco53kI	GAGCTC	1 cut(s)	2556
Eco57I	CTGAAG	5 cut(s)	594, 699, 1298, 1803, 1878
EcoICRI	GAGCTC	1 cut(s)	2556
EcoO109I	RGGNCCY	1 cut(s)	327
EcoRI	GAATTC	1 cut(s)	733
EcoRII	CCWGG	8 cut(s)	51, 205, 505, 1219, 1414, 1714, 2084, 3121
EcoT14I	CCWWGG	4 cut(s)	97, 1483, 2960, 3250
EcoT38I	GRGCYC	1 cut(s)	2558
ErhI	CCWWGG	4 cut(s)	97, 1483, 2960, 3250
FalI	AAGNNNNNCTT	2 cut(s)	2714, 2746
FaqI	GGGAC	1 cut(s)	2969
FauNDI	CATATG	2 cut(s)	1396, 1507
FbaI	TGATCA	4 cut(s)	451, 1174, 1660, 2152
FblI	GTMKAC	1 cut(s)	2309
FokI	GGATG	4 cut(s)	315, 364, 2302, 3130
FriOI	GRGCYC	1 cut(s)	2558
FspI	TGCGCA	2 cut(s)	1212, 1912
GlaI	GCGC	3 cut(s)	1212, 1912, 2130
GsuI	CTGGAG	5 cut(s)	489, 1149, 1698, 2270, 2931
HaeIII	GGCC	5 cut(s)	279, 910, 1488, 3249, 3302
HapII	CCGG	3 cut(s)	170, 1238, 1379
HgaI	GACGC	3 cut(s)	1272, 1462, 1889
HhaI	GCGC	3 cut(s)	1213, 1913, 2131
Hin1I	GRCGYC	1 cut(s)	1283
Hin6I	GCGC	3 cut(s)	1211, 1911, 2129
HinP1I	GCGC	3 cut(s)	1211, 1911, 2129
HindIII	AAGCTT	1 cut(s)	2199
HpaII	CCGG	3 cut(s)	170, 1238, 1379
HphI	GGTGA	6 cut(s)	86, 2498, 2606, 2648, 3211, 3286
Hpy188III	TCNNGA	9 cut(s)	47, 1016, 1262, 1341, 2180, 2206, 2444, 2523, 3059
HpyAV	CCTTC	7 cut(s)	6, 48, 1273, 2407, 2529, 2689, 2715
HpyCH4IV	ACGT	3 cut(s)	784, 1777, 1939
HpyF10VI	GCNNNNNNNGC	8 cut(s)	71, 126, 361, 481, 1133, 2579, 2876, 3288
HpySE526I	ACGT	3 cut(s)	784, 1777, 1939
Hsp92I	GRCGYC	1 cut(s)	1283
HspAI	GCGC	3 cut(s)	1211, 1911, 2129
KpnI	GGTACC	1 cut(s)	59
Ksp22I	TGATCA	4 cut(s)	451, 1174, 1660, 2152
LguI	GCTCTTC	3 cut(s)	564, 669, 780
LmnI	GCTCC	8 cut(s)	5, 178, 850, 1717, 2239, 2251, 2727, 2965
Lsp1109I	GCAGC	7 cut(s)	376, 1462, 1560, 2722, 2750, 2863, 3145
LweI	GCATC	6 cut(s)	342, 946, 1123, 1706, 2432, 3108
MabI	ACCWGGT	1 cut(s)	51
MaeII	ACGT	3 cut(s)	784, 1777, 1939
MaeIII	GTNAC	4 cut(s)	199, 236, 2157, 3022
MbiI	CCGCTC	1 cut(s)	8
MfeI	CAATTG	1 cut(s)	2026
MflI	RGATCY	5 cut(s)	1223, 2440, 2446, 2477, 2835
MhlI	GDGCHC	2 cut(s)	122, 2558
MlsI	TGGCCA	2 cut(s)	279, 1488
MluNI	TGGCCA	2 cut(s)	279, 1488
MmeI	TCCRAC	8 cut(s)	692, 893, 1493, 1819, 2277, 2361, 2452, 2954
Mox20I	TGGCCA	2 cut(s)	279, 1488
MscI	TGGCCA	2 cut(s)	279, 1488
MslI	CAYNNNNRTG	4 cut(s)	99, 301, 893, 2331
Msp20I	TGGCCA	2 cut(s)	279, 1488
MspA1I	CMGCKG	2 cut(s)	311, 1573
MspI	CCGG	3 cut(s)	170, 1238, 1379
MssI	GTTTAAAC	2 cut(s)	397, 1606
MunI	CAATTG	1 cut(s)	2026
Mva1269I	GAATGC	1 cut(s)	3239
MvaI	CCWGG	8 cut(s)	53, 207, 507, 1221, 1416, 1716, 2086, 3123
MwoI	GCNNNNNNNGC	8 cut(s)	71, 126, 361, 481, 1133, 2579, 2876, 3288
NciI	CCSGG	2 cut(s)	1239, 1380
NcoI	CCATGG	1 cut(s)	1483
NdeI	CATATG	2 cut(s)	1396, 1507
NheI	GCTAGC	2 cut(s)	484, 1478
NmuCI	GTSAC	2 cut(s)	236, 2157
NsbI	TGCGCA	2 cut(s)	1212, 1912
NspI	RCATGY	1 cut(s)	975
OliI	CACNNNNGTG	2 cut(s)	99, 893
PagI	TCATGA	1 cut(s)	3058
PciI	ACATGT	1 cut(s)	971
PciSI	GCTCTTC	3 cut(s)	564, 669, 780
PcsI	WCGNNNNNNNCGW	1 cut(s)	2836
PctI	GAATGC	1 cut(s)	3239
PflMI	CCANNNNNTGG	1 cut(s)	3019
PfoI	TCCNGGA	1 cut(s)	1219
PmeI	GTTTAAAC	2 cut(s)	397, 1606
Ppu21I	YACGTR	2 cut(s)	785, 1778
PpuMI	RGGWCCY	1 cut(s)	327
PscI	ACATGT	1 cut(s)	971
Psp124BI	GAGCTC	1 cut(s)	2558
Psp5II	RGGWCCY	1 cut(s)	327
Psp6I	CCWGG	8 cut(s)	51, 205, 505, 1219, 1414, 1714, 2084, 3121
PspGI	CCWGG	8 cut(s)	51, 205, 505, 1219, 1414, 1714, 2084, 3121
PspPI	GGNCC	5 cut(s)	306, 327, 1382, 2546, 3247
PspPPI	RGGWCCY	1 cut(s)	327
PstI	CTGCAG	2 cut(s)	1578, 2740
PstNI	CAGNNNCTG	5 cut(s)	617, 722, 1079, 2351, 3227
PsuI	RGATCY	5 cut(s)	1223, 2440, 2446, 2477, 2835
PvuII	CAGCTG	1 cut(s)	1573
RsaI	GTAC	9 cut(s)	57, 574, 741, 834, 1119, 1291, 1728, 2397, 2842
RsaNI	GTAC	9 cut(s)	56, 573, 740, 833, 1118, 1290, 1727, 2396, 2841
RseI	CAYNNNNRTG	4 cut(s)	99, 301, 893, 2331
SacI	GAGCTC	1 cut(s)	2558
SapI	GCTCTTC	3 cut(s)	564, 669, 780
Sau96I	GGNCC	5 cut(s)	306, 327, 1382, 2546, 3247
ScaI	AGTACT	1 cut(s)	1291
SduI	GDGCHC	2 cut(s)	122, 2558
SexAI	ACCWGGT	1 cut(s)	51
SfaNI	GCATC	6 cut(s)	342, 946, 1123, 1706, 2432, 3108
SfcI	CTRYAG	7 cut(s)	232, 1137, 1574, 1630, 2016, 2628, 2736
SinI	GGWCC	4 cut(s)	306, 327, 1382, 2546
SmiMI	CAYNNNNRTG	4 cut(s)	99, 301, 893, 2331
SmlI	CTYRAG	3 cut(s)	880, 1592, 3107
SmoI	CTYRAG	3 cut(s)	880, 1592, 3107
SpeI	ACTAGT	1 cut(s)	1834
SsiI	CCGC	9 cut(s)	8, 309, 602, 1619, 1730, 2021, 2775, 2879, 3161
SspI	AATATT	3 cut(s)	289, 1408, 1498
SstI	GAGCTC	1 cut(s)	2558
StyI	CCWWGG	4 cut(s)	97, 1483, 2960, 3250
TaiI	ACGT	3 cut(s)	787, 1780, 1942
TaqI	TCGA	6 cut(s)	968, 2140, 2166, 2524, 2830, 3314
TatI	WGTACW	2 cut(s)	572, 1289
TauI	GCSGC	4 cut(s)	604, 2778, 2882, 3164
TseFI	GTSAC	2 cut(s)	236, 2157
TseI	GCWGC	7 cut(s)	364, 1475, 1573, 2735, 2738, 2876, 3158
Tsp45I	GTSAC	2 cut(s)	236, 2157
TspGWI	ACGGA	3 cut(s)	315, 2828, 2932
Van91I	CCANNNNNTGG	1 cut(s)	3019
VneI	GTGCAC	1 cut(s)	118
VpaK11BI	GGWCC	4 cut(s)	306, 327, 1382, 2546
XapI	RAATTY	8 cut(s)	79, 727, 733, 1362, 1464, 1643, 2757, 3090
XbaI	TCTAGA	1 cut(s)	1261
XceI	RCATGY	1 cut(s)	975
XmaJI	CCTAGG	1 cut(s)	97
XmiI	GTMKAC	1 cut(s)	2309
ZrmI	AGTACT	1 cut(s)	1291

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.