DCD (Development and cell death) domain protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TPM_phosphatase | PF04536 | 104 - 206 | 5.8e-18 | TPM domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 568 |
| Acc65I | GGTACC | 1 cut(s) | 477 |
| AccB1I | GGYRCC | 1 cut(s) | 477 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 171 |
| AciI | CCGC | 1 cut(s) | 626 |
| AcuI | CTGAAG | 1 cut(s) | 468 |
| AfaI | GTAC | 1 cut(s) | 479 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 171, 299 |
| AgsI | TTSAA | 4 cut(s) | 43, 75, 111, 572 |
| AhlI | ACTAGT | 1 cut(s) | 245 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 40, 72 |
| AluBI | AGCT | 7 cut(s) | 171, 200, 228, 263, 424, 437, 575 |
| AluI | AGCT | 7 cut(s) | 171, 200, 228, 263, 424, 437, 575 |
| AoxI | GGCC | 1 cut(s) | 290 |
| ApeKI | GCWGC | 1 cut(s) | 200 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 9, 392 |
| Asp718I | GGTACC | 1 cut(s) | 477 |
| AspS9I | GGNCC | 2 cut(s) | 290, 557 |
| AsuC2I | CCSGG | 1 cut(s) | 338 |
| AsuHPI | GGTGA | 4 cut(s) | 144, 352, 418, 517 |
| AvaII | GGWCC | 1 cut(s) | 557 |
| BanI | GGYRCC | 1 cut(s) | 477 |
| BbvI | GCAGC | 1 cut(s) | 187 |
| BclI | TGATCA | 1 cut(s) | 279 |
| BcnI | CCSGG | 1 cut(s) | 338 |
| BcuI | ACTAGT | 1 cut(s) | 245 |
| BfaI | CTAG | 3 cut(s) | 197, 246, 260 |
| BfuAI | ACCTGC | 1 cut(s) | 568 |
| BisI | GCNGC | 2 cut(s) | 201, 627 |
| BlpI | GCTNAGC | 1 cut(s) | 332 |
| BlsI | GCNGC | 2 cut(s) | 202, 628 |
| Bme1390I | CCNGG | 1 cut(s) | 338 |
| Bme18I | GGWCC | 1 cut(s) | 557 |
| BmgT120I | GGNCC | 2 cut(s) | 290, 557 |
| BmiI | GGNNCC | 3 cut(s) | 291, 304, 479 |
| BmrFI | CCNGG | 1 cut(s) | 338 |
| BmrI | ACTGGG | 1 cut(s) | 230 |
| BmsI | GCATC | 3 cut(s) | 155, 310, 430 |
| BmuI | ACTGGG | 1 cut(s) | 230 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 332 |
| BpuMI | CCSGG | 1 cut(s) | 338 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 573, 603 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 171, 299 |
| Bse1I | ACTGG | 2 cut(s) | 236, 528 |
| Bse3DI | GCAATG | 1 cut(s) | 259 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 171, 299 |
| BseMI | GCAATG | 1 cut(s) | 259 |
| BseMII | CTCAG | 1 cut(s) | 258 |
| BseNI | ACTGG | 2 cut(s) | 236, 528 |
| BseRI | GAGGAG | 2 cut(s) | 24, 506 |
| BseXI | GCAGC | 1 cut(s) | 187 |
| BshFI | GGCC | 1 cut(s) | 292 |
| BshNI | GGYRCC | 1 cut(s) | 477 |
| BsiSI | CCGG | 1 cut(s) | 337 |
| BslFI | GGGAC | 1 cut(s) | 64 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 171, 299 |
| BsmFI | GGGAC | 1 cut(s) | 64 |
| BsnI | GGCC | 1 cut(s) | 292 |
| Bsp143I | GATC | 1 cut(s) | 279 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 332 |
| BspACI | CCGC | 1 cut(s) | 626 |
| BspANI | GGCC | 1 cut(s) | 292 |
| BspCNI | CTCAG | 1 cut(s) | 259 |
| BspLI | GGNNCC | 3 cut(s) | 291, 304, 479 |
| BspMI | ACCTGC | 1 cut(s) | 568 |
| BspT107I | GGYRCC | 1 cut(s) | 477 |
| BsrDI | GCAATG | 1 cut(s) | 259 |
| BsrI | ACTGG | 2 cut(s) | 236, 528 |
| BssMI | GATC | 1 cut(s) | 279 |
| Bst4CI | ACNGT | 2 cut(s) | 415, 604 |
| Bst6I | CTCTTC | 3 cut(s) | 44, 61, 89 |
| BstDEI | CTNAG | 3 cut(s) | 224, 267, 332 |
| BstEII | GGTNACC | 1 cut(s) | 340 |
| BstKTI | GATC | 1 cut(s) | 282 |
| BstMBI | GATC | 1 cut(s) | 279 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 206 |
| BstPI | GGTNACC | 1 cut(s) | 340 |
| BstSCI | CCNGG | 1 cut(s) | 336 |
| BstV1I | GCAGC | 1 cut(s) | 187 |
| BsuRI | GGCC | 1 cut(s) | 292 |
| BtsIMutI | CAGTG | 1 cut(s) | 411 |
| BveI | ACCTGC | 1 cut(s) | 568 |
| Cfr13I | GGNCC | 2 cut(s) | 290, 557 |
| CseI | GACGC | 1 cut(s) | 605 |
| Csp6I | GTAC | 1 cut(s) | 478 |
| CviAII | CATG | 1 cut(s) | 182 |
| CviQI | GTAC | 1 cut(s) | 478 |
| DdeI | CTNAG | 3 cut(s) | 224, 267, 332 |
| DpnI | GATC | 1 cut(s) | 281 |
| DpnII | GATC | 1 cut(s) | 279 |
| Eam1104I | CTCTTC | 3 cut(s) | 44, 61, 89 |
| EarI | CTCTTC | 3 cut(s) | 44, 61, 89 |
| Eco47I | GGWCC | 1 cut(s) | 557 |
| Eco57I | CTGAAG | 1 cut(s) | 468 |
| Eco91I | GGTNACC | 1 cut(s) | 340 |
| EcoO65I | GGTNACC | 1 cut(s) | 340 |
| FaeI | CATG | 1 cut(s) | 185 |
| FaiI | YATR | 4 cut(s) | 183, 309, 453, 631 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 68, 100, 576, 608 |
| FaqI | GGGAC | 1 cut(s) | 64 |
| FatI | CATG | 1 cut(s) | 181 |
| FbaI | TGATCA | 1 cut(s) | 279 |
| Fnu4HI | GCNGC | 2 cut(s) | 201, 627 |
| Fsp4HI | GCNGC | 2 cut(s) | 201, 627 |
| FspBI | CTAG | 3 cut(s) | 197, 246, 260 |
| GluI | GCNGC | 2 cut(s) | 201, 627 |
| HaeIII | GGCC | 1 cut(s) | 292 |
| HapII | CCGG | 1 cut(s) | 337 |
| HgaI | GACGC | 1 cut(s) | 605 |
| Hin1II | CATG | 1 cut(s) | 185 |
| HindIII | AAGCTT | 1 cut(s) | 226 |
| HpaII | CCGG | 1 cut(s) | 337 |
| HphI | GGTGA | 4 cut(s) | 144, 352, 418, 517 |
| Hpy166II | GTNNAC | 1 cut(s) | 557 |
| Hpy188I | TCNGA | 4 cut(s) | 268, 352, 419, 610 |
| Hpy188III | TCNNGA | 2 cut(s) | 241, 620 |
| Hpy8I | GTNNAC | 1 cut(s) | 557 |
| HpyAV | CCTTC | 4 cut(s) | 492, 533, 578, 626 |
| HpyCH4III | ACNGT | 2 cut(s) | 415, 604 |
| HpyCH4V | TGCA | 4 cut(s) | 209, 257, 323, 563 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 206 |
| HpyF3I | CTNAG | 3 cut(s) | 224, 267, 332 |
| Hsp92II | CATG | 1 cut(s) | 185 |
| KpnI | GGTACC | 1 cut(s) | 481 |
| Ksp22I | TGATCA | 1 cut(s) | 279 |
| Kzo9I | GATC | 1 cut(s) | 279 |
| LmnI | GCTCC | 2 cut(s) | 308, 542 |
| LpnPI | CCDG | 8 cut(s) | 157, 249, 309, 350, 442, 537, 541, 573 |
| Lsp1109I | GCAGC | 1 cut(s) | 187 |
| LweI | GCATC | 3 cut(s) | 155, 310, 430 |
| MaeI | CTAG | 3 cut(s) | 197, 246, 260 |
| MaeIII | GTNAC | 4 cut(s) | 340, 366, 409, 523 |
| MalI | GATC | 1 cut(s) | 281 |
| MboI | GATC | 1 cut(s) | 279 |
| MboII | GAAGA | 7 cut(s) | 9, 31, 48, 76, 141, 392, 400 |
| MluCI | AATT | 3 cut(s) | 70, 106, 403 |
| MmeI | TCCRAC | 1 cut(s) | 157 |
| MnlI | CCTC | 8 cut(s) | 34, 45, 92, 98, 125, 280, 484, 487 |
| MroXI | GAANNNNTTC | 2 cut(s) | 9, 392 |
| MseI | TTAA | 1 cut(s) | 141 |
| MspI | CCGG | 1 cut(s) | 337 |
| MspR9I | CCNGG | 1 cut(s) | 338 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 206 |
| NciI | CCSGG | 1 cut(s) | 338 |
| NdeII | GATC | 1 cut(s) | 279 |
| NlaIII | CATG | 1 cut(s) | 185 |
| NlaIV | GGNNCC | 3 cut(s) | 291, 304, 479 |
| NmuCI | GTSAC | 3 cut(s) | 340, 409, 523 |
| PdmI | GAANNNNTTC | 2 cut(s) | 9, 392 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 171 |
| PkrI | GCNGC | 2 cut(s) | 202, 628 |
| PspEI | GGTNACC | 1 cut(s) | 340 |
| PspN4I | GGNNCC | 3 cut(s) | 291, 304, 479 |
| PspPI | GGNCC | 2 cut(s) | 290, 557 |
| RsaI | GTAC | 1 cut(s) | 479 |
| RsaNI | GTAC | 1 cut(s) | 478 |
| SaqAI | TTAA | 1 cut(s) | 141 |
| SatI | GCNGC | 2 cut(s) | 201, 627 |
| Sau3AI | GATC | 1 cut(s) | 279 |
| Sau96I | GGNCC | 2 cut(s) | 290, 557 |
| ScrFI | CCNGG | 1 cut(s) | 338 |
| SfaNI | GCATC | 3 cut(s) | 155, 310, 430 |
| SinI | GGWCC | 1 cut(s) | 557 |
| SpeI | ACTAGT | 1 cut(s) | 245 |
| Sse9I | AATT | 3 cut(s) | 70, 106, 403 |
| SsiI | CCGC | 1 cut(s) | 626 |
| SspMI | CTAG | 3 cut(s) | 197, 246, 260 |
| StyD4I | CCNGG | 1 cut(s) | 336 |
| TaaI | ACNGT | 2 cut(s) | 415, 604 |
| TasI | AATT | 3 cut(s) | 70, 106, 403 |
| TauI | GCSGC | 1 cut(s) | 629 |
| Tru1I | TTAA | 1 cut(s) | 141 |
| Tru9I | TTAA | 1 cut(s) | 141 |
| TscAI | CASTG | 1 cut(s) | 418 |
| TseFI | GTSAC | 3 cut(s) | 340, 409, 523 |
| TseI | GCWGC | 1 cut(s) | 200 |
| Tsp45I | GTSAC | 3 cut(s) | 340, 409, 523 |
| TspRI | CASTG | 1 cut(s) | 418 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 171 |
| VpaK11BI | GGWCC | 1 cut(s) | 557 |
| XmnI | GAANNNNTTC | 2 cut(s) | 9, 392 |
| XspI | CTAG | 3 cut(s) | 197, 246, 260 |