Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0000666

Physical Location & Seq

Genomic Coordinates Forward (+)

9310044 .. 9314147

Gene Structure 4104 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG115300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGGGAGCGGGAAGGAAAACTGAGACCTATACTCTGCCTTCTAATCAAGACCTGGTACCCTATGCTGTGTCTGCAAGAAATTTGATGAAGAATCACCTAGGTGCAGTCATCTTTGGGTGCACGCACAGCACAATGAATGAATGTCTATCAAAACAACTCTTTGGTTTACCGGCTCCACACCTTATATATGTGAAGAAAGTTACACCTGGCTTACCACTATTTCTGTTCAACTATAGTGACAGGAAGCTATATGGTATCTTTGAGGCTACTGGTCATGGCCAAATGAATATTGACCCATACGGATGGACCGCTGATGGGTCAGGGAGGACCCAATTTCCTGCACAGGTTCGGATGCGTGTTCGGCAGCAGTGCCGACCACTGCTTGAAAGCCAGTTTAAACCAATAATTGCTGATAACTACTTCAATCCACAGCATTTCATGTTTGAGCTTGATCATGTTCAAACAAGAAATCTGCTATCTCTGCTAGCACCATTGACGATTTCTCCAGGTAAACCAACACCACAGAATCCAATGCTGAGGGAAACTGATTTTCAAGCTCTTCCATCATCTAGTACAATACAGAACGCTGAATCGTGTAAGCCGCCCACTTCAGAGGCTGAGAATCCTACTCCTCTACCCAACTGGGAAACCGATTTTCCAGCTCTTCCAACTCAGAATACAATACAGAAAACTGAATTGTTGAAACAACCCACTTCAGGGGCTGAGAATTTGAATTCTGTACCCACAGTGAACTGGGAAACTGAGTTTCCAGCTCTTCCATCACGTAATACATTACAAAAGAAAGCTGTATTGTGTAAACCAGCCACTTCTGTACCACAGAATAGAGTGGAGCTGGAAACTGATATTCCAACTCTTCCCTCAAGTAGCACAGTAGAGGAACCTGAATGGCCTTATCAACTTACTTCACAGGCTGAGCATCTGAACAGTTCACGTCTTAAAGGGGGTTCGACATGTTCTACACCTCAGAATACAGTGAAGTGGGAAGCTGATTTTCCAGATTTTCCCTCAATTAACATAATACAGGAACCTGAATGGCTTGAAGCACTTATTTCAGAGGCTGAGCATTTGAATAGTTCAAATCTGAAATTGGATTCTGTACCTTTGGCTGGAGATGCTGTAGATAGTAAGGCAGAGAGTCCATTCTCCCAGTTTGATCAGAAGAGTGGAGAGAGTTCTTGCTACTTTTCTGCACAGAGTCCTGGATCCATGTTCTATCCGGGGATCATTACTAAGTTGCTTCAAGAGGTGCAAGAGCTGAAGGCGTCTAGTACCGCACAGACTGAGAAGATGAGATATTTGGAGGATAAGCTGGTAATGCATATCTTTGTCAAAAAATCTCTGTATTTCTGCTTCTGCACCTTATTTCTTCTGCCGATTCGTCTAAATAAAGTTGAATTGCATCATGCGTTAGTCAAGCATTTACATCACTGGCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005856 GO:0008150 GO:0008582 GO:0040008 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044087 GO:0044424 GO:0044464 GO:0045886 GO:0045926 GO:0048519 GO:0048523 GO:0048638 GO:0048640 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050807 GO:0051093 GO:0051128 GO:0051129 GO:0051239 GO:0051241 GO:0051960 GO:0051961 GO:0051963 GO:0051964 GO:0065007 GO:0065008 GO:1904396 GO:1904397 GO:1905809 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Dev_Cell_Death Kelch_1 Kelch_5

Protein Analysis

485

Amino Acids

54.4

Weight (kDa)

6.12

Isoelectric Point (pI)

47.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dev_Cell_Death	PF10539	35 - 161	4.4e-49	Development and cell death domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01660 AT5G01660 AT5G01660
fragaria_vesca	FvH4_6g10590 FvH4_6g10591 FvH4_6g10591 FvH4_6g10591
malus_domestica	MD04G1166900.v1.1 MD12G1180200.v1.1 MD12G1180500.v1.1
prunus_persica	Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285100_v2.0.a1 Prupe.6G285200_v2.0.a1 Prupe.6G285200_v2.0.a1 Prupe.6G285200_v2.0.a1
pyrus_communis	pycom04g14830 pycom12g16990
rosa_chinensis	RchiOBHm_Chr2g0145311 RchiOBHm_Chr3g0461571 RchiOBHm_Chr3g0461581
rosa_laevigata	RLG00000024916 RLG00000024917
rosa_multiflora	Rmu_sc0000790.1_g000001 Rmu_sc0003979.1_g000002 Rmu_sc0006964.1_g000002 Rmu_sc0010327.1_g000003 Rmu_ssc0000193.1_g000005 Rmu_ssc0000193.1_g000006
rosa_roxburghii	Rroxscaffold_4G00330190 Rroxscaffold_6G00418120 Rroxscaffold_6G00418130 Rroxscaffold_6G00418490 Rroxscaffold_6G00418500
rosa_rugosa	Rorug01G0017200 Rorug01G0017900 Rorug03G0051900 Rorug03G0052000 Rorug03G0052000 Rorug03G0052100
rosa_samantha	Rh1CG027200 Rh1CG027400 Rh1CG027500 Rh1CG027700 Rh1CG073300 Rh1CG101500 Rh1CG101600 Rh1DG042300 Rh1DG042800 Rh3AG110200 Rh3AG110300 Rh3BG113400 Rh3BG113500 Rh3CG115300 Rh3CG115400 Rh3DG115100 Rh3DG115200 Rh5AG167800 Rh5BG556300 Rh5CG579000 Rh6AG136600 Rh7DG359300
rosa_wichuraiana	Rw1G002200 Rw1G002230 Rw3G009320 Rw3G009330 Rw7G020340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	55
AccB1I	GGYRCC	1 cut(s)	55
AccBSI	CCGCTC	1 cut(s)	8
AciI	CCGC	4 cut(s)	8, 309, 602, 1293
AclWI	GGATC	3 cut(s)	1218, 1231, 1250
AcoI	YGGCCR	1 cut(s)	277
AcsI	RAATTY	3 cut(s)	79, 727, 733
AcuI	CTGAAG	3 cut(s)	594, 699, 1298
AcyI	GRCGYC	1 cut(s)	1283
AfaI	GTAC	6 cut(s)	57, 574, 741, 834, 1119, 1291
AfiI	CCNNNNNNNGG	4 cut(s)	315, 716, 717, 1127
AflIII	ACRYGT	1 cut(s)	971
AjiI	CACGTC	1 cut(s)	953
AjnI	CCWGG	4 cut(s)	51, 205, 505, 1219
AleI	CACNNNNGTG	1 cut(s)	99
Alw21I	GWGCWC	1 cut(s)	122
Alw26I	GTCTC	1 cut(s)	17
Alw44I	GTGCAC	1 cut(s)	118
AlwI	GGATC	3 cut(s)	1218, 1231, 1250
AlwNI	CAGNNNCTG	3 cut(s)	617, 722, 1079
AoxI	GGCC	2 cut(s)	277, 908
ApaLI	GTGCAC	1 cut(s)	118
ApeKI	GCWGC	1 cut(s)	364
ApoI	RAATTY	3 cut(s)	79, 727, 733
Asp718I	GGTACC	1 cut(s)	55
AspA2I	CCTAGG	1 cut(s)	97
AspS9I	GGNCC	2 cut(s)	306, 327
AsuC2I	CCSGG	1 cut(s)	1239
AsuHPI	GGTGA	1 cut(s)	86
AsuNHI	GCTAGC	1 cut(s)	484
AvaII	GGWCC	2 cut(s)	306, 327
AvrII	CCTAGG	1 cut(s)	97
BaeGI	GKGCMC	1 cut(s)	122
BaeI	ACNNNNGTAYC	2 cut(s)	816, 849
BalI	TGGCCA	1 cut(s)	279
BamHI	GGATCC	1 cut(s)	1223
BanI	GGYRCC	1 cut(s)	55
BarI	GAAGNNNNNNTAC	2 cut(s)	1355, 1387
Bbv12I	GWGCWC	1 cut(s)	122
BbvCI	CCTCAGC	1 cut(s)	536
BbvI	GCAGC	1 cut(s)	376
BccI	CCATC	4 cut(s)	297, 308, 571, 787
BciT130I	CCWGG	4 cut(s)	53, 207, 507, 1221
BclI	TGATCA	2 cut(s)	451, 1174
BcnI	CCSGG	1 cut(s)	1239
BcoDI	GTCTC	1 cut(s)	17
BfaI	CTAG	4 cut(s)	98, 485, 570, 1287
BfmI	CTRYAG	2 cut(s)	232, 1137
BisI	GCNGC	2 cut(s)	365, 602
BlnI	CCTAGG	1 cut(s)	97
BlpI	GCTNAGC	2 cut(s)	933, 1080
BlsI	GCNGC	2 cut(s)	366, 603
Bme1390I	CCNGG	5 cut(s)	53, 207, 507, 1221, 1239
Bme18I	GGWCC	2 cut(s)	306, 327
BmgBI	CACGTC	1 cut(s)	953
BmgT120I	GGNCC	2 cut(s)	306, 327
BmiI	GGNNCC	6 cut(s)	57, 174, 329, 900, 1047, 1225
BmrFI	CCNGG	5 cut(s)	53, 207, 507, 1221, 1239
BmrI	ACTGGG	3 cut(s)	652, 763, 1162
BmsI	GCATC	4 cut(s)	342, 946, 1123, 1429
BmtI	GCTAGC	1 cut(s)	488
BmuI	ACTGGG	3 cut(s)	652, 763, 1162
BpmI	CTGGAG	2 cut(s)	489, 1149
Bpu10I	CCTNAGC	1 cut(s)	536
Bpu1102I	GCTNAGC	2 cut(s)	933, 1080
BpuEI	CTTGAG	1 cut(s)	865
BpuMI	CCSGG	1 cut(s)	1239
BsaAI	YACGTR	1 cut(s)	785
BsaHI	GRCGYC	1 cut(s)	1283
BsaI	GGTCTC	1 cut(s)	17
BsaJI	CCNNGG	2 cut(s)	97, 1238
BsaXI	ACNNNNNCTCC	4 cut(s)	487, 517, 1122, 1152
Bsc4I	CCNNNNNNNGG	4 cut(s)	315, 716, 717, 1127
Bse118I	RCCGGY	1 cut(s)	169
Bse1I	ACTGG	6 cut(s)	274, 391, 647, 758, 1168, 1454
BseBI	CCWGG	4 cut(s)	53, 207, 507, 1221
BseDI	CCNNGG	2 cut(s)	97, 1238
BseGI	GGATG	2 cut(s)	308, 357
BseLI	CCNNNNNNNGG	4 cut(s)	315, 716, 717, 1127
BseNI	ACTGG	6 cut(s)	274, 391, 647, 758, 1168, 1454
BseRI	GAGGAG	1 cut(s)	621
BseSI	GKGCMC	1 cut(s)	122
BseXI	GCAGC	1 cut(s)	376
BsgI	GTGCAG	4 cut(s)	123, 324, 1194, 1360
BshFI	GGCC	2 cut(s)	279, 910
BshNI	GGYRCC	1 cut(s)	55
BsiHKAI	GWGCWC	1 cut(s)	122
BsiSI	CCGG	2 cut(s)	170, 1238
BslI	CCNNNNNNNGG	4 cut(s)	315, 716, 717, 1127
BsmAI	GTCTC	1 cut(s)	17
BsnI	GGCC	2 cut(s)	279, 910
Bso31I	GGTCTC	1 cut(s)	17
Bsp1286I	GDGCHC	1 cut(s)	122
Bsp143I	GATC	4 cut(s)	451, 1174, 1223, 1242
Bsp1720I	GCTNAGC	2 cut(s)	933, 1080
BspACI	CCGC	4 cut(s)	8, 309, 602, 1293
BspANI	GGCC	2 cut(s)	279, 910
BspLI	GGNNCC	6 cut(s)	57, 174, 329, 900, 1047, 1225
BspOI	GCTAGC	1 cut(s)	488
BspPI	GGATC	3 cut(s)	1218, 1231, 1250
BspQI	GCTCTTC	3 cut(s)	564, 669, 780
BspT107I	GGYRCC	1 cut(s)	55
BspTNI	GGTCTC	1 cut(s)	17
BsrBI	CCGCTC	1 cut(s)	8
BsrFI	RCCGGY	1 cut(s)	169
BsrI	ACTGG	6 cut(s)	274, 391, 647, 758, 1168, 1454
BssAI	RCCGGY	1 cut(s)	169
BssECI	CCNNGG	2 cut(s)	97, 1238
BssMI	GATC	4 cut(s)	451, 1174, 1223, 1242
BssNI	GRCGYC	1 cut(s)	1283
BssT1I	CCWWGG	1 cut(s)	97
Bst2UI	CCWGG	4 cut(s)	53, 207, 507, 1221
Bst4CI	ACNGT	4 cut(s)	748, 892, 947, 994
Bst6I	CTCTTC	5 cut(s)	564, 669, 780, 879, 1175
BstACI	GRCGYC	1 cut(s)	1283
BstBAI	YACGTR	1 cut(s)	785
BstC8I	GCNNGC	2 cut(s)	122, 486
BstF5I	GGATG	2 cut(s)	308, 357
BstKTI	GATC	4 cut(s)	454, 1177, 1226, 1245
BstMAI	GTCTC	1 cut(s)	17
BstMBI	GATC	4 cut(s)	451, 1174, 1223, 1242
BstMWI	GCNNNNNNNGC	6 cut(s)	71, 126, 361, 481, 1133, 1336
BstNI	CCWGG	4 cut(s)	53, 207, 507, 1221
BstNSI	RCATGY	1 cut(s)	975
BstSCI	CCNGG	5 cut(s)	51, 205, 505, 1219, 1237
BstSFI	CTRYAG	2 cut(s)	232, 1137
BstSLI	GKGCMC	1 cut(s)	122
BstV1I	GCAGC	1 cut(s)	376
BstX2I	RGATCY	1 cut(s)	1223
BstXI	CCANNNNNNTGG	1 cut(s)	303
BstYI	RGATCY	1 cut(s)	1223
BsuRI	GGCC	2 cut(s)	279, 910
BtrI	CACGTC	1 cut(s)	953
BtsCI	GGATG	2 cut(s)	308, 357
BtsI	GCAGTG	2 cut(s)	374, 377
BtsIMutI	CAGTG	6 cut(s)	374, 377, 753, 999, 1447, 1453
Cac8I	GCNNGC	2 cut(s)	122, 486
CaiI	CAGNNNCTG	3 cut(s)	617, 722, 1079
Cfr10I	RCCGGY	1 cut(s)	169
Cfr13I	GGNCC	2 cut(s)	306, 327
CseI	GACGC	1 cut(s)	1272
CsiI	ACCWGGT	1 cut(s)	51
Csp6I	GTAC	6 cut(s)	56, 573, 740, 833, 1118, 1290
CviAII	CATG	6 cut(s)	275, 439, 455, 972, 1228, 1424
CviQI	GTAC	6 cut(s)	56, 573, 740, 833, 1118, 1290
DpnI	GATC	4 cut(s)	453, 1176, 1225, 1244
DpnII	GATC	4 cut(s)	451, 1174, 1223, 1242
DraI	TTTAAA	1 cut(s)	397
EaeI	YGGCCR	1 cut(s)	277
Eam1104I	CTCTTC	5 cut(s)	564, 669, 780, 879, 1175
EarI	CTCTTC	5 cut(s)	564, 669, 780, 879, 1175
Eco130I	CCWWGG	1 cut(s)	97
Eco31I	GGTCTC	1 cut(s)	17
Eco47I	GGWCC	2 cut(s)	306, 327
Eco57I	CTGAAG	3 cut(s)	594, 699, 1298
EcoO109I	RGGNCCY	1 cut(s)	327
EcoRI	GAATTC	1 cut(s)	733
EcoRII	CCWGG	4 cut(s)	51, 205, 505, 1219
EcoT14I	CCWWGG	1 cut(s)	97
EcoT22I	ATGCAT	1 cut(s)	1341
ErhI	CCWWGG	1 cut(s)	97
FaeI	CATG	6 cut(s)	278, 442, 458, 975, 1231, 1427
FatI	CATG	6 cut(s)	274, 438, 454, 971, 1227, 1423
FbaI	TGATCA	2 cut(s)	451, 1174
Fnu4HI	GCNGC	2 cut(s)	365, 602
FokI	GGATG	2 cut(s)	315, 364
Fsp4HI	GCNGC	2 cut(s)	365, 602
FspBI	CTAG	4 cut(s)	98, 485, 570, 1287
GluI	GCNGC	2 cut(s)	365, 602
GsuI	CTGGAG	2 cut(s)	489, 1149
HaeIII	GGCC	2 cut(s)	279, 910
HapII	CCGG	2 cut(s)	170, 1238
HgaI	GACGC	1 cut(s)	1272
Hin1I	GRCGYC	1 cut(s)	1283
Hin1II	CATG	6 cut(s)	278, 442, 458, 975, 1231, 1427
HinfI	GANTC	8 cut(s)	91, 526, 590, 622, 1112, 1156, 1216, 1396
HpaII	CCGG	2 cut(s)	170, 1238
HphI	GGTGA	1 cut(s)	86
Hpy166II	GTNNAC	6 cut(s)	120, 167, 512, 751, 818, 950
Hpy188I	TCNGA	8 cut(s)	351, 613, 675, 942, 987, 1075, 1104, 1179
Hpy188III	TCNNGA	3 cut(s)	47, 1016, 1262
Hpy8I	GTNNAC	6 cut(s)	120, 167, 512, 751, 818, 950
HpyAV	CCTTC	3 cut(s)	6, 48, 1273
HpyCH4III	ACNGT	4 cut(s)	748, 892, 947, 994
HpyCH4IV	ACGT	2 cut(s)	784, 952
HpyCH4V	TGCA	9 cut(s)	74, 104, 120, 341, 1211, 1270, 1339, 1377, 1420
HpyF10VI	GCNNNNNNNGC	6 cut(s)	71, 126, 361, 481, 1133, 1336
HpySE526I	ACGT	2 cut(s)	784, 952
Hsp92I	GRCGYC	1 cut(s)	1283
Hsp92II	CATG	6 cut(s)	278, 442, 458, 975, 1231, 1427
KpnI	GGTACC	1 cut(s)	59
Ksp22I	TGATCA	2 cut(s)	451, 1174
Kzo9I	GATC	4 cut(s)	451, 1174, 1223, 1242
LguI	GCTCTTC	3 cut(s)	564, 669, 780
LmnI	GCTCC	3 cut(s)	5, 178, 850
Lsp1109I	GCAGC	1 cut(s)	376
LweI	GCATC	4 cut(s)	342, 946, 1123, 1429
MabI	ACCWGGT	1 cut(s)	51
MaeI	CTAG	4 cut(s)	98, 485, 570, 1287
MaeII	ACGT	2 cut(s)	784, 952
MaeIII	GTNAC	2 cut(s)	199, 236
MalI	GATC	4 cut(s)	453, 1176, 1225, 1244
MbiI	CCGCTC	1 cut(s)	8
MboI	GATC	4 cut(s)	451, 1174, 1223, 1242
MboII	GAAGA	9 cut(s)	100, 205, 551, 656, 767, 866, 1192, 1318, 1379
MflI	RGATCY	1 cut(s)	1223
MhlI	GDGCHC	1 cut(s)	122
MlsI	TGGCCA	1 cut(s)	279
MluCI	AATT	9 cut(s)	79, 332, 405, 695, 727, 733, 1029, 1106, 1415
MluNI	TGGCCA	1 cut(s)	279
MlyI	GAGTC	2 cut(s)	1165, 1225
MmeI	TCCRAC	2 cut(s)	692, 893
Mox20I	TGGCCA	1 cut(s)	279
Mph1103I	ATGCAT	1 cut(s)	1341
MscI	TGGCCA	1 cut(s)	279
MseI	TTAA	3 cut(s)	396, 957, 1032
MslI	CAYNNNNRTG	2 cut(s)	99, 301
Msp20I	TGGCCA	1 cut(s)	279
MspA1I	CMGCKG	1 cut(s)	311
MspI	CCGG	2 cut(s)	170, 1238
MspR9I	CCNGG	5 cut(s)	53, 207, 507, 1221, 1239
MssI	GTTTAAAC	1 cut(s)	397
MvaI	CCWGG	4 cut(s)	53, 207, 507, 1221
MwoI	GCNNNNNNNGC	6 cut(s)	71, 126, 361, 481, 1133, 1336
NciI	CCSGG	1 cut(s)	1239
NdeII	GATC	4 cut(s)	451, 1174, 1223, 1242
NheI	GCTAGC	1 cut(s)	484
NlaIII	CATG	6 cut(s)	278, 442, 458, 975, 1231, 1427
NlaIV	GGNNCC	6 cut(s)	57, 174, 329, 900, 1047, 1225
NmuCI	GTSAC	1 cut(s)	236
NsiI	ATGCAT	1 cut(s)	1341
NspI	RCATGY	1 cut(s)	975
OliI	CACNNNNGTG	1 cut(s)	99
PciI	ACATGT	1 cut(s)	971
PciSI	GCTCTTC	3 cut(s)	564, 669, 780
PfeI	GAWTC	6 cut(s)	91, 526, 590, 622, 1112, 1396
PfoI	TCCNGGA	1 cut(s)	1219
PkrI	GCNGC	2 cut(s)	366, 603
PleI	GAGTC	2 cut(s)	1164, 1224
PmeI	GTTTAAAC	1 cut(s)	397
PpsI	GAGTC	2 cut(s)	1164, 1224
Ppu21I	YACGTR	1 cut(s)	785
PpuMI	RGGWCCY	1 cut(s)	327
PscI	ACATGT	1 cut(s)	971
Psp5II	RGGWCCY	1 cut(s)	327
Psp6I	CCWGG	4 cut(s)	51, 205, 505, 1219
PspGI	CCWGG	4 cut(s)	51, 205, 505, 1219
PspN4I	GGNNCC	6 cut(s)	57, 174, 329, 900, 1047, 1225
PspPI	GGNCC	2 cut(s)	306, 327
PspPPI	RGGWCCY	1 cut(s)	327
PstNI	CAGNNNCTG	3 cut(s)	617, 722, 1079
PsuI	RGATCY	1 cut(s)	1223
RsaI	GTAC	6 cut(s)	57, 574, 741, 834, 1119, 1291
RsaNI	GTAC	6 cut(s)	56, 573, 740, 833, 1118, 1290
RseI	CAYNNNNRTG	2 cut(s)	99, 301
SapI	GCTCTTC	3 cut(s)	564, 669, 780
SaqAI	TTAA	3 cut(s)	396, 957, 1032
SatI	GCNGC	2 cut(s)	365, 602
Sau3AI	GATC	4 cut(s)	451, 1174, 1223, 1242
Sau96I	GGNCC	2 cut(s)	306, 327
SchI	GAGTC	2 cut(s)	1165, 1225
ScrFI	CCNGG	5 cut(s)	53, 207, 507, 1221, 1239
SduI	GDGCHC	1 cut(s)	122
SexAI	ACCWGGT	1 cut(s)	51
SfaNI	GCATC	4 cut(s)	342, 946, 1123, 1429
SfcI	CTRYAG	2 cut(s)	232, 1137
SinI	GGWCC	2 cut(s)	306, 327
SmiMI	CAYNNNNRTG	2 cut(s)	99, 301
SmlI	CTYRAG	1 cut(s)	880
SmoI	CTYRAG	1 cut(s)	880
Sse9I	AATT	9 cut(s)	79, 332, 405, 695, 727, 733, 1029, 1106, 1415
SsiI	CCGC	4 cut(s)	8, 309, 602, 1293
SspI	AATATT	1 cut(s)	289
SspMI	CTAG	4 cut(s)	98, 485, 570, 1287
StyD4I	CCNGG	5 cut(s)	51, 205, 505, 1219, 1237
StyI	CCWWGG	1 cut(s)	97
TaaI	ACNGT	4 cut(s)	748, 892, 947, 994
TaiI	ACGT	2 cut(s)	787, 955
TaqI	TCGA	1 cut(s)	968
TasI	AATT	9 cut(s)	79, 332, 405, 695, 727, 733, 1029, 1106, 1415
TatI	WGTACW	1 cut(s)	572
TauI	GCSGC	1 cut(s)	604
TfiI	GAWTC	6 cut(s)	91, 526, 590, 622, 1112, 1396
Tru1I	TTAA	3 cut(s)	396, 957, 1032
Tru9I	TTAA	3 cut(s)	396, 957, 1032
TscAI	CASTG	5 cut(s)	374, 384, 753, 999, 1454
TseFI	GTSAC	1 cut(s)	236
TseI	GCWGC	1 cut(s)	364
Tsp45I	GTSAC	1 cut(s)	236
TspDTI	ATGAA	5 cut(s)	101, 149, 153, 299, 427
TspGWI	ACGGA	1 cut(s)	315
TspRI	CASTG	5 cut(s)	374, 384, 753, 999, 1454
VneI	GTGCAC	1 cut(s)	118
VpaK11BI	GGWCC	2 cut(s)	306, 327
XapI	RAATTY	3 cut(s)	79, 727, 733
XceI	RCATGY	1 cut(s)	975
XmaJI	CCTAGG	1 cut(s)	97
XspI	CTAG	4 cut(s)	98, 485, 570, 1287
Zsp2I	ATGCAT	1 cut(s)	1341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.