Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001238

Physical Location & Seq

Genomic Coordinates Forward (+)

47669924 .. 47680230

Gene Structure 10307 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00033110.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGGATAAGCACCAGCGGCACAACTCCGCCGGTATCGAGCCTCCGCTTAGCTCAGTCCCTCCGCCGAGCTCCAAGAGAGCAGCAGGCTTCACTGCCACCACCAGCTCGTCGAGTGCTCCACTGGCACCATCTCCGCTGGACACCACCACCACCAGCGTTCCTCCAAGACCAGCGGCTAAACCTCCGCTAAACACCACTAGCGAAACCGCCAGCCAGGTCACTGCTAGGCATCCCAGCCTGCCAGCACCCAGAGGCCCAGCAGCAACTCTACCAGTGGCAGAGCTCCAGTCGGCGGCACATTCTTCCGCCAATCTCTGTCAGCGGCAAAGCCCCAGTCGGTGGCAAAGCAAGCTTCTCAGCTTCGGTCGGCCGAGCTCCAGTCATCGGTACATTCTTCCGCCAATCTCCGACAGCGGCCCTCCTCCGCTGGCCAAAGCTCTTCTCCAGCCGACTGGGACACTGCTAAACACCACCGGCGCCTCTTGGCCACCATATTTTGTCCAACTTTCCCCACGGGAAAGAGACCCAAACGGGTCTAGACTCCACGAGTTTATGGTCTACGACCAACCGCCAAGCGGTAAGGCAATGCCTCATAATGACAATGACCGCTACGCGACATTACGATCAAGCTTTTCTCCTCCAGGTCTTGGTCTAAAAGGACCGCACAAGAGTGATCGGCGTTTGGTAAGCCGGCTTATTTGCGAGCTTCAAAAAAAGCTGCCCGACTTATGGCTAAAAGCGGCGGCTCCCCCGGCTTTTAAAAGCCGAAGCTCGGAGTGTTACCGTAGCGTCCAACGAGCAACCGCCACCGTCGCCGCACCGCCTAATCCGGCTCCGTCCCTCCCCGAGTACCCGAAGATGATTATGGCGGCGATTGAGGCGCTTAATGAGAGCGAGGGGTCGAACAAGACCTCGATCGCGCAGCAAATCGAGTCCACCTACGGCGATGCGCCGCCGGCTCACGCCACGCTTCTAGCGCACCACCTCGACAAGATGAAGCGGAGCGGCGAGCTCGTTTTAGTCAAGAACAACTACATGAAGCCCGACCCCAACGCGCCGCCCAAGCGGGGCCGCGCCGCCCGCCCAAGCCCAAGGTCCCGGCGCCGGAAGGAGCCGCCGTGGTCTCCTCGCCTCCGAGGCCACGTGGCGGACCTCCCAAGCCTAGGGATCCGTTTTTCCCGCTCCCAATTGCCAAGAGCTCGACATCCACCGGTCCGGCGGCCACGTGGCCGCCCTCCGAAGAAGGCCAAGACAAGTCCGACCTCGACTCGGCCGGCTCCGGCGAGTGGTGCCCCTAGAGGTAGAGGCGAGGCCACCGAAAGTCAAGCCCTCCGTAGCTCGGTGGGTTGCGAGATCACGGTGAGAGAGAAAAAGAGAAACAACGAGTGCGTTTTTAGGCTTCTTTTTTGGGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AT_hook Linker_histone

Protein Analysis

471

Amino Acids

51.09

Weight (kDa)

10.86

Isoelectric Point (pI)

81.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Linker_histone	PF00538	282 - 343	1.9e-08	linker histone H1 and H5 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001238)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14900
fragaria_vesca	FvH4_1g28760 FvH4_3g22350 FvH4_4g10240 FvH4_4g16250 FvH4_4g34011 FvH4_4g34030 FvH4_5g06490
malus_domestica	MD09G1263200.v1.1 MD13G1021100.v1.1 MD16G1022400.v1.1 MD17G1258400.v1.1
prunus_persica	Prupe.1G330600_v2.0.a1 Prupe.3G161100_v2.0.a1
pyrus_communis	pycom09g17750 pycom13g02000 pycom16g01970 pycom17g26030
rosa_chinensis	RchiOBHm_Chr3g0493151 RchiOBHm_Chr4g0443521
rosa_laevigata	RLG00000005921 RLG00000022725
rosa_multiflora	Rmu_sc0004094.1_g000037 Rmu_sc0009488.1_g000002 Rmu_sc0009954.1_g000002
rosa_roxburghii	Rroxscaffold_1G00033110 Rroxscaffold_5G00353160 Rroxscaffold_5G00384060 Rroxscaffold_6G00391770
rosa_rugosa	Rorug03G0259500 Rorug04G0347000
rosa_samantha	Rh2BG493600 Rh2BG493700 Rh2DG502600 Rh2DG502700 Rh3AG308500 Rh3BG344600 Rh3CG341800 Rh3DG343900 Rh4AG402600 Rh4BG208400 Rh4BG414100 Rh4CG429900 Rh4DG241300 Rh4DG409800 Rh4DG411100 Rh5BG528400 Rh5CG552800 Rh5DG132000 Rh5DG289700 Rh6CG100400
rosa_wichuraiana	Rw0G017400 Rw3G027130 Rw4G007110 Rw4G007140 Rw4G034710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	4 cut(s)	124, 476, 1101, 1289
AccB7I	CCANNNNNTGG	2 cut(s)	339, 647
AccBSI	CCGCTC	2 cut(s)	1005, 1182
AccI	GTMKAC	1 cut(s)	558
AccII	CGCG	4 cut(s)	614, 920, 1055, 1074
AclWI	GGATC	2 cut(s)	1162, 1175
AcoI	YGGCCR	6 cut(s)	368, 429, 485, 1220, 1228, 1271
AcvI	CACGTG	2 cut(s)	1144, 1226
AcyI	GRCGYC	2 cut(s)	477, 1102
AfaI	GTAC	2 cut(s)	389, 851
AgeI	ACCGGT	1 cut(s)	1210
AgsI	TTSAA	1 cut(s)	710
AjnI	CCWGG	2 cut(s)	213, 640
AleI	CACNNNNGTG	1 cut(s)	669
Alw21I	GWGCWC	6 cut(s)	71, 118, 285, 377, 1014, 1201
Alw26I	GTCTC	2 cut(s)	516, 1128
AlwI	GGATC	2 cut(s)	1162, 1175
Ama87I	CYCGRG	1 cut(s)	845
ApeKI	GCWGC	4 cut(s)	80, 260, 718, 922
ArsI	GACNNNNNNTTYG	2 cut(s)	319, 351
AsiGI	ACCGGT	1 cut(s)	1210
AspA2I	CCTAGG	1 cut(s)	1162
AspLEI	GCGC	8 cut(s)	479, 883, 922, 952, 979, 1057, 1076, 1104
AspS9I	GGNCC	7 cut(s)	254, 416, 659, 1069, 1095, 1150, 1213
AsuC2I	CCSGG	2 cut(s)	752, 1099
AsuHPI	GGTGA	1 cut(s)	1372
AvaI	CYCGRG	1 cut(s)	845
AvaII	GGWCC	4 cut(s)	659, 1095, 1150, 1213
AvrII	CCTAGG	1 cut(s)	1162
BaeGI	GKGCMC	1 cut(s)	1294
BalI	TGGCCA	2 cut(s)	431, 487
BamHI	GGATCC	1 cut(s)	1167
BanI	GGYRCC	4 cut(s)	124, 476, 1101, 1289
BanII	GRGCYC	5 cut(s)	71, 285, 377, 1014, 1201
BauI	CACGAG	1 cut(s)	545
BbrPI	CACGTG	2 cut(s)	1144, 1226
Bbv12I	GWGCWC	6 cut(s)	71, 118, 285, 377, 1014, 1201
BbvI	GCAGC	4 cut(s)	92, 272, 705, 934
BccI	CCATC	1 cut(s)	136
BceAI	ACGGC	2 cut(s)	958, 1102
BciT130I	CCWGG	2 cut(s)	215, 642
BcnI	CCSGG	2 cut(s)	752, 1099
BcoDI	GTCTC	2 cut(s)	516, 1128
BfaI	CTAG	6 cut(s)	198, 225, 537, 974, 1163, 1296
BfoI	RGCGCY	3 cut(s)	480, 884, 1105
BglI	GCCNNNNNGGC	1 cut(s)	1137
BlnI	CCTAGG	1 cut(s)	1162
BlpI	GCTNAGC	1 cut(s)	47
Bme1390I	CCNGG	4 cut(s)	215, 642, 752, 1099
Bme18I	GGWCC	4 cut(s)	659, 1095, 1150, 1213
BmeT110I	CYCGRG	1 cut(s)	845
BmgT120I	GGNCC	7 cut(s)	254, 416, 659, 1069, 1095, 1150, 1213
BmrFI	CCNGG	4 cut(s)	215, 642, 752, 1099
BmrI	ACTGGG	2 cut(s)	327, 462
BmsI	GCATC	2 cut(s)	238, 937
BmuI	ACTGGG	2 cut(s)	327, 462
BpmI	CTGGAG	4 cut(s)	269, 361, 428, 624
Bpu1102I	GCTNAGC	1 cut(s)	47
BpuMI	CCSGG	2 cut(s)	752, 1099
BsaAI	YACGTR	2 cut(s)	1144, 1226
BsaHI	GRCGYC	2 cut(s)	477, 1102
BsaI	GGTCTC	2 cut(s)	516, 1128
BsaJI	CCNNGG	6 cut(s)	512, 750, 1091, 1118, 1135, 1162
BsaWI	WCCGGW	1 cut(s)	1210
BsaXI	ACNNNNNCTCC	2 cut(s)	1103, 1133
Bse118I	RCCGGY	6 cut(s)	29, 473, 690, 955, 1210, 1273
Bse1I	ACTGG	6 cut(s)	126, 272, 286, 333, 378, 457
Bse3DI	GCAATG	1 cut(s)	591
BseBI	CCWGG	2 cut(s)	215, 642
BseDI	CCNNGG	6 cut(s)	512, 750, 1091, 1118, 1135, 1162
BseGI	GGATG	2 cut(s)	229, 1204
BseMI	GCAATG	1 cut(s)	591
BseMII	CTCAG	2 cut(s)	66, 370
BseNI	ACTGG	6 cut(s)	126, 272, 286, 333, 378, 457
BseRI	GAGGAG	3 cut(s)	411, 627, 1116
BseSI	GKGCMC	1 cut(s)	1294
BseX3I	CGGCCG	2 cut(s)	368, 1271
BseXI	GCAGC	4 cut(s)	92, 272, 705, 934
BseYI	CCCAGC	2 cut(s)	233, 256
Bsh1236I	CGCG	4 cut(s)	614, 920, 1055, 1074
Bsh1285I	CGRYCG	4 cut(s)	367, 371, 918, 1274
BshNI	GGYRCC	4 cut(s)	124, 476, 1101, 1289
BshTI	ACCGGT	1 cut(s)	1210
BsiEI	CGRYCG	4 cut(s)	367, 371, 918, 1274
BsiHKAI	GWGCWC	6 cut(s)	71, 118, 285, 377, 1014, 1201
BsiHKCI	CYCGRG	1 cut(s)	845
BslFI	GGGAC	4 cut(s)	41, 469, 823, 1081
BsmAI	GTCTC	2 cut(s)	516, 1128
BsmFI	GGGAC	4 cut(s)	41, 469, 823, 1081
Bso31I	GGTCTC	2 cut(s)	516, 1128
BsoBI	CYCGRG	1 cut(s)	845
Bsp1286I	GDGCHC	7 cut(s)	71, 118, 285, 377, 1014, 1201, 1294
Bsp143I	GATC	5 cut(s)	623, 673, 915, 1167, 1353
Bsp1720I	GCTNAGC	1 cut(s)	47
BspCNI	CTCAG	2 cut(s)	65, 369
BspFNI	CGCG	4 cut(s)	614, 920, 1055, 1074
BspPI	GGATC	2 cut(s)	1162, 1175
BspQI	GCTCTTC	1 cut(s)	444
BspT107I	GGYRCC	4 cut(s)	124, 476, 1101, 1289
BspTNI	GGTCTC	2 cut(s)	516, 1128
BsrBI	CCGCTC	2 cut(s)	1005, 1182
BsrDI	GCAATG	1 cut(s)	591
BsrFI	RCCGGY	6 cut(s)	29, 473, 690, 955, 1210, 1273
BsrI	ACTGG	6 cut(s)	126, 272, 286, 333, 378, 457
BssAI	RCCGGY	6 cut(s)	29, 473, 690, 955, 1210, 1273
BssECI	CCNNGG	6 cut(s)	512, 750, 1091, 1118, 1135, 1162
BssMI	GATC	5 cut(s)	623, 673, 915, 1167, 1353
BssNI	GRCGYC	2 cut(s)	477, 1102
BssSI	CACGAG	1 cut(s)	545
BssT1I	CCWWGG	2 cut(s)	1091, 1162
Bst2BI	CACGAG	1 cut(s)	545
Bst2UI	CCWGG	2 cut(s)	215, 642
Bst4CI	ACNGT	3 cut(s)	785, 811, 1360
Bst6I	CTCTTC	1 cut(s)	444
BstACI	GRCGYC	2 cut(s)	477, 1102
BstBAI	YACGTR	2 cut(s)	1144, 1226
BstDEI	CTNAG	3 cut(s)	47, 52, 356
BstDSI	CCRYGG	2 cut(s)	512, 1118
BstF5I	GGATG	2 cut(s)	229, 1204
BstFNI	CGCG	4 cut(s)	614, 920, 1055, 1074
BstH2I	RGCGCY	3 cut(s)	480, 884, 1105
BstHHI	GCGC	8 cut(s)	479, 883, 922, 952, 979, 1057, 1076, 1104
BstKTI	GATC	5 cut(s)	626, 676, 918, 1170, 1356
BstMAI	GTCTC	2 cut(s)	516, 1128
BstMBI	GATC	5 cut(s)	623, 673, 915, 1167, 1353
BstMCI	CGRYCG	4 cut(s)	367, 371, 918, 1274
BstNI	CCWGG	2 cut(s)	215, 642
BstSCI	CCNGG	4 cut(s)	213, 640, 750, 1097
BstSLI	GKGCMC	1 cut(s)	1294
BstUI	CGCG	4 cut(s)	614, 920, 1055, 1074
BstV1I	GCAGC	4 cut(s)	92, 272, 705, 934
BstX2I	RGATCY	1 cut(s)	1167
BstXI	CCANNNNNNTGG	1 cut(s)	452
BstYI	RGATCY	1 cut(s)	1167
BstZI	CGGCCG	2 cut(s)	368, 1271
BtgI	CCRYGG	2 cut(s)	512, 1118
BtgZI	GCGATG	1 cut(s)	960
BtsCI	GGATG	2 cut(s)	229, 1204
BtsI	GCAGTG	3 cut(s)	90, 219, 458
BtsIMutI	CAGTG	5 cut(s)	90, 119, 219, 279, 458
CfoI	GCGC	8 cut(s)	479, 883, 922, 952, 979, 1057, 1076, 1104
Cfr10I	RCCGGY	6 cut(s)	29, 473, 690, 955, 1210, 1273
Cfr13I	GGNCC	7 cut(s)	254, 416, 659, 1069, 1095, 1150, 1213
CpoI	CGGWCCG	1 cut(s)	1213
CseI	GACGC	1 cut(s)	778
Csp6I	GTAC	2 cut(s)	388, 850
CspAI	ACCGGT	1 cut(s)	1210
CspI	CGGWCCG	1 cut(s)	1213
CviAII	CATG	1 cut(s)	1036
CviQI	GTAC	2 cut(s)	388, 850
DdeI	CTNAG	3 cut(s)	47, 52, 356
DinI	GGCGCC	2 cut(s)	478, 1103
DpnI	GATC	5 cut(s)	625, 675, 917, 1169, 1355
DpnII	GATC	5 cut(s)	623, 673, 915, 1167, 1353
DraI	TTTAAA	1 cut(s)	760
EaeI	YGGCCR	6 cut(s)	368, 429, 485, 1220, 1228, 1271
EagI	CGGCCG	2 cut(s)	368, 1271
Eam1104I	CTCTTC	1 cut(s)	444
EarI	CTCTTC	1 cut(s)	444
EciI	GGCGGA	5 cut(s)	16, 51, 295, 387, 1163
Ecl136II	GAGCTC	5 cut(s)	69, 283, 375, 1012, 1199
EclXI	CGGCCG	2 cut(s)	368, 1271
Eco130I	CCWWGG	2 cut(s)	1091, 1162
Eco24I	GRGCYC	5 cut(s)	71, 285, 377, 1014, 1201
Eco31I	GGTCTC	2 cut(s)	516, 1128
Eco47I	GGWCC	4 cut(s)	659, 1095, 1150, 1213
Eco52I	CGGCCG	2 cut(s)	368, 1271
Eco53kI	GAGCTC	5 cut(s)	69, 283, 375, 1012, 1199
Eco72I	CACGTG	2 cut(s)	1144, 1226
Eco88I	CYCGRG	1 cut(s)	845
EcoICRI	GAGCTC	5 cut(s)	69, 283, 375, 1012, 1199
EcoO109I	RGGNCCY	1 cut(s)	1095
EcoRII	CCWGG	2 cut(s)	213, 640
EcoT14I	CCWWGG	2 cut(s)	1091, 1162
EcoT38I	GRGCYC	5 cut(s)	71, 285, 377, 1014, 1201
EgeI	GGCGCC	2 cut(s)	478, 1103
EheI	GGCGCC	2 cut(s)	478, 1103
ErhI	CCWWGG	2 cut(s)	1091, 1162
FaeI	CATG	1 cut(s)	1039
FaiI	YATR	6 cut(s)	493, 554, 594, 730, 866, 1037
FaqI	GGGAC	4 cut(s)	41, 469, 823, 1081
FatI	CATG	1 cut(s)	1035
FauI	CCCGC	3 cut(s)	1059, 1088, 1187
FblI	GTMKAC	1 cut(s)	558
FokI	GGATG	2 cut(s)	216, 1191
FriOI	GRGCYC	5 cut(s)	71, 285, 377, 1014, 1201
FspBI	CTAG	6 cut(s)	198, 225, 537, 974, 1163, 1296
GlaI	GCGC	8 cut(s)	478, 882, 921, 951, 978, 1056, 1075, 1103
GsaI	CCCAGC	2 cut(s)	237, 260
GsuI	CTGGAG	4 cut(s)	269, 361, 428, 624
HaeII	RGCGCY	3 cut(s)	480, 884, 1105
HgaI	GACGC	1 cut(s)	778
HhaI	GCGC	8 cut(s)	479, 883, 922, 952, 979, 1057, 1076, 1104
Hin1I	GRCGYC	2 cut(s)	477, 1102
Hin1II	CATG	1 cut(s)	1039
Hin6I	GCGC	8 cut(s)	477, 881, 920, 950, 977, 1055, 1074, 1102
HinP1I	GCGC	8 cut(s)	477, 881, 920, 950, 977, 1055, 1074, 1102
HindIII	AAGCTT	2 cut(s)	350, 628
HinfI	GANTC	3 cut(s)	540, 932, 1267
HphI	GGTGA	1 cut(s)	1372
Hpy166II	GTNNAC	2 cut(s)	559, 936
Hpy188I	TCNGA	5 cut(s)	409, 775, 1136, 1239, 1260
Hpy188III	TCNNGA	2 cut(s)	537, 1024
Hpy8I	GTNNAC	2 cut(s)	559, 936
Hpy99I	CGWCG	2 cut(s)	112, 815
HpyAV	CCTTC	2 cut(s)	1102, 1237
HpyCH4III	ACNGT	3 cut(s)	785, 811, 1360
HpyCH4IV	ACGT	2 cut(s)	1143, 1225
HpyF3I	CTNAG	3 cut(s)	47, 52, 356
HpySE526I	ACGT	2 cut(s)	1143, 1225
Hsp92I	GRCGYC	2 cut(s)	477, 1102
Hsp92II	CATG	1 cut(s)	1039
HspAI	GCGC	8 cut(s)	477, 881, 920, 950, 977, 1055, 1074, 1102
KasI	GGCGCC	2 cut(s)	476, 1101
KroI	GCCGGC	3 cut(s)	690, 955, 1273
KroNI	GCCGGC	3 cut(s)	692, 957, 1275
Kzo9I	GATC	5 cut(s)	623, 673, 915, 1167, 1353
LguI	GCTCTTC	1 cut(s)	444
Lsp1109I	GCAGC	4 cut(s)	92, 272, 705, 934
LweI	GCATC	2 cut(s)	238, 937
MaeI	CTAG	6 cut(s)	198, 225, 537, 974, 1163, 1296
MaeII	ACGT	2 cut(s)	1143, 1225
MaeIII	GTNAC	2 cut(s)	217, 779
MalI	GATC	5 cut(s)	625, 675, 917, 1169, 1355
MbiI	CCGCTC	2 cut(s)	1005, 1182
MboI	GATC	5 cut(s)	623, 673, 915, 1167, 1353
MboII	GAAGA	5 cut(s)	294, 386, 431, 868, 1252
MfeI	CAATTG	1 cut(s)	1187
MflI	RGATCY	1 cut(s)	1167
MhlI	GDGCHC	7 cut(s)	71, 118, 285, 377, 1014, 1201, 1294
MlsI	TGGCCA	2 cut(s)	431, 487
MluCI	AATT	1 cut(s)	1187
MluNI	TGGCCA	2 cut(s)	431, 487
Mly113I	GGCGCC	2 cut(s)	477, 1102
MlyI	GAGTC	3 cut(s)	534, 941, 1261
MmeI	TCCRAC	4 cut(s)	432, 526, 817, 1283
Mox20I	TGGCCA	2 cut(s)	431, 487
MroNI	GCCGGC	3 cut(s)	690, 955, 1273
MscI	TGGCCA	2 cut(s)	431, 487
MseI	TTAA	3 cut(s)	759, 885, 1414
MslI	CAYNNNNRTG	1 cut(s)	669
Msp20I	TGGCCA	2 cut(s)	431, 487
MspA1I	CMGCKG	6 cut(s)	16, 136, 173, 322, 414, 427
MspR9I	CCNGG	4 cut(s)	215, 642, 752, 1099
MunI	CAATTG	1 cut(s)	1187
MvaI	CCWGG	2 cut(s)	215, 642
MvnI	CGCG	4 cut(s)	614, 920, 1055, 1074
NaeI	GCCGGC	3 cut(s)	692, 957, 1275
NarI	GGCGCC	2 cut(s)	477, 1102
NciI	CCSGG	2 cut(s)	752, 1099
NdeII	GATC	5 cut(s)	623, 673, 915, 1167, 1353
NgoMIV	GCCGGC	3 cut(s)	690, 955, 1273
NlaIII	CATG	1 cut(s)	1039
NmeAIII	GCCGAG	3 cut(s)	90, 396, 1249
NmuCI	GTSAC	1 cut(s)	217
OliI	CACNNNNGTG	1 cut(s)	669
PciSI	GCTCTTC	1 cut(s)	444
PdiI	GCCGGC	3 cut(s)	692, 957, 1275
PflMI	CCANNNNNTGG	2 cut(s)	339, 647
PinAI	ACCGGT	1 cut(s)	1210
Ple19I	CGATCG	1 cut(s)	918
PleI	GAGTC	3 cut(s)	534, 940, 1261
PluTI	GGCGCC	2 cut(s)	480, 1105
PmaCI	CACGTG	2 cut(s)	1144, 1226
PmlI	CACGTG	2 cut(s)	1144, 1226
PpsI	GAGTC	3 cut(s)	534, 940, 1261
Ppu21I	YACGTR	2 cut(s)	1144, 1226
PpuMI	RGGWCCY	1 cut(s)	1095
Psp124BI	GAGCTC	5 cut(s)	71, 285, 377, 1014, 1201
Psp5II	RGGWCCY	1 cut(s)	1095
Psp6I	CCWGG	2 cut(s)	213, 640
PspCI	CACGTG	2 cut(s)	1144, 1226
PspFI	CCCAGC	2 cut(s)	233, 256
PspGI	CCWGG	2 cut(s)	213, 640
PspPI	GGNCC	7 cut(s)	254, 416, 659, 1069, 1095, 1150, 1213
PspPPI	RGGWCCY	1 cut(s)	1095
PsuI	RGATCY	1 cut(s)	1167
PvuI	CGATCG	1 cut(s)	918
RsaI	GTAC	2 cut(s)	389, 851
RsaNI	GTAC	2 cut(s)	388, 850
RseI	CAYNNNNRTG	1 cut(s)	669
Rsr2I	CGGWCCG	1 cut(s)	1213
RsrII	CGGWCCG	1 cut(s)	1213
SacI	GAGCTC	5 cut(s)	71, 285, 377, 1014, 1201
SapI	GCTCTTC	1 cut(s)	444
SaqAI	TTAA	3 cut(s)	759, 885, 1414
Sau3AI	GATC	5 cut(s)	623, 673, 915, 1167, 1353
Sau96I	GGNCC	7 cut(s)	254, 416, 659, 1069, 1095, 1150, 1213
SchI	GAGTC	3 cut(s)	534, 941, 1261
ScrFI	CCNGG	4 cut(s)	215, 642, 752, 1099
SduI	GDGCHC	7 cut(s)	71, 118, 285, 377, 1014, 1201, 1294
SfaNI	GCATC	2 cut(s)	238, 937
SfoI	GGCGCC	2 cut(s)	478, 1103
SgrAI	CRCCGGYG	1 cut(s)	473
SinI	GGWCC	4 cut(s)	659, 1095, 1150, 1213
SmiMI	CAYNNNNRTG	1 cut(s)	669
Sse9I	AATT	1 cut(s)	1187
SspDI	GGCGCC	2 cut(s)	476, 1101
SspMI	CTAG	6 cut(s)	198, 225, 537, 974, 1163, 1296
SstI	GAGCTC	5 cut(s)	71, 285, 377, 1014, 1201
StyD4I	CCNGG	4 cut(s)	213, 640, 750, 1097
StyI	CCWWGG	2 cut(s)	1091, 1162
TaaI	ACNGT	3 cut(s)	785, 811, 1360
TaiI	ACGT	2 cut(s)	1146, 1228
TaqI	TCGA	8 cut(s)	36, 110, 902, 914, 930, 987, 1201, 1265
TaqII	GACCGA	1 cut(s)	353
TasI	AATT	1 cut(s)	1187
Tru1I	TTAA	3 cut(s)	759, 885, 1414
Tru9I	TTAA	3 cut(s)	759, 885, 1414
TscAI	CASTG	5 cut(s)	97, 126, 226, 279, 465
TseFI	GTSAC	1 cut(s)	217
TseI	GCWGC	4 cut(s)	80, 260, 718, 922
Tsp45I	GTSAC	1 cut(s)	217
TspDTI	ATGAA	2 cut(s)	1010, 1052
TspGWI	ACGGA	3 cut(s)	825, 1160, 1322
TspRI	CASTG	5 cut(s)	97, 126, 226, 279, 465
Van91I	CCANNNNNTGG	2 cut(s)	339, 647
VpaK11BI	GGWCC	4 cut(s)	659, 1095, 1150, 1213
XbaI	TCTAGA	1 cut(s)	536
XmaJI	CCTAGG	1 cut(s)	1162
XmiI	GTMKAC	1 cut(s)	558
XspI	CTAG	6 cut(s)	198, 225, 537, 974, 1163, 1296

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.