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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g35240 FvH4_4g24650 FvH4_6g07961 |
| rosa_chinensis | RchiOBHm_Chr5g0018421 RchiOBHm_Chr5g0035691 RchiOBHm_Chr6g0253311 |
| rosa_laevigata | RLG00000009282 RLG00000024808 |
| rosa_roxburghii | Rroxscaffold_1G00038440 Rroxscaffold_1G00044810 Rroxscaffold_1G00044930 Rroxscaffold_2G00155750 Rroxscaffold_3G00252240 Rroxscaffold_6G00408950 Rroxscaffold_6G00413390 Rroxscaffold_7G00174630 |
| rosa_rugosa | Rorug01G0185800.1 Rorug01G0241800 Rorug02G0382700 Rorug05G0151800 Rorug05G0329200 Rorug06G0052300 |
| rosa_samantha | Rh1AG252700 Rh1BG044700 Rh1CG091300 Rh2AG510700 Rh2DG310500 Rh5BG244900 Rh5BG245900 Rh5CG146100 Rh5CG276500 Rh5DG254400 Rh7AG208000 Rh7CG278600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 25 |
| AciI | CCGC | 1 cut(s) | 152 |
| AclWI | GGATC | 1 cut(s) | 109 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 34, 103, 104 |
| AgeI | ACCGGT | 1 cut(s) | 27 |
| AgsI | TTSAA | 1 cut(s) | 11 |
| Alw21I | GWGCWC | 1 cut(s) | 112 |
| AlwI | GGATC | 1 cut(s) | 109 |
| AoxI | GGCC | 2 cut(s) | 13, 81 |
| ApeKI | GCWGC | 1 cut(s) | 140 |
| AsiGI | ACCGGT | 1 cut(s) | 27 |
| AsuC2I | CCSGG | 1 cut(s) | 99 |
| AsuHPI | GGTGA | 1 cut(s) | 166 |
| AsuNHI | GCTAGC | 1 cut(s) | 148 |
| BbsI | GAAGAC | 1 cut(s) | 73 |
| Bbv12I | GWGCWC | 1 cut(s) | 112 |
| BbvI | GCAGC | 1 cut(s) | 152 |
| BceAI | ACGGC | 1 cut(s) | 161 |
| BcnI | CCSGG | 1 cut(s) | 99 |
| BfaI | CTAG | 1 cut(s) | 149 |
| BfuAI | ACCTGC | 1 cut(s) | 25 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 12 |
| BisI | GCNGC | 1 cut(s) | 141 |
| BlsI | GCNGC | 1 cut(s) | 142 |
| Bme1390I | CCNGG | 1 cut(s) | 99 |
| BmrFI | CCNGG | 1 cut(s) | 99 |
| BmsI | GCATC | 1 cut(s) | 170 |
| BmtI | GCTAGC | 1 cut(s) | 152 |
| BpiI | GAAGAC | 1 cut(s) | 73 |
| BpuMI | CCSGG | 1 cut(s) | 99 |
| BsaJI | CCNNGG | 1 cut(s) | 97 |
| BsaWI | WCCGGW | 1 cut(s) | 27 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 78, 108, 161, 191 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 34, 103, 104 |
| Bse118I | RCCGGY | 1 cut(s) | 27 |
| BseDI | CCNNGG | 1 cut(s) | 97 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 34, 103, 104 |
| BseMII | CTCAG | 1 cut(s) | 173 |
| BseXI | GCAGC | 1 cut(s) | 152 |
| Bsh1285I | CGRYCG | 1 cut(s) | 32 |
| BshFI | GGCC | 2 cut(s) | 15, 83 |
| BshTI | ACCGGT | 1 cut(s) | 27 |
| BsiEI | CGRYCG | 1 cut(s) | 32 |
| BsiHKAI | GWGCWC | 1 cut(s) | 112 |
| BsiSI | CCGG | 2 cut(s) | 28, 99 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 34, 103, 104 |
| BsnI | GGCC | 2 cut(s) | 15, 83 |
| Bsp1286I | GDGCHC | 1 cut(s) | 112 |
| Bsp143I | GATC | 1 cut(s) | 101 |
| BspACI | CCGC | 1 cut(s) | 152 |
| BspANI | GGCC | 2 cut(s) | 15, 83 |
| BspCNI | CTCAG | 1 cut(s) | 174 |
| BspMI | ACCTGC | 1 cut(s) | 25 |
| BspOI | GCTAGC | 1 cut(s) | 152 |
| BspPI | GGATC | 1 cut(s) | 109 |
| BsrFI | RCCGGY | 1 cut(s) | 27 |
| BssAI | RCCGGY | 1 cut(s) | 27 |
| BssECI | CCNNGG | 1 cut(s) | 97 |
| BssMI | GATC | 1 cut(s) | 101 |
| BstC8I | GCNNGC | 1 cut(s) | 150 |
| BstDEI | CTNAG | 1 cut(s) | 182 |
| BstKTI | GATC | 1 cut(s) | 104 |
| BstMBI | GATC | 1 cut(s) | 101 |
| BstMCI | CGRYCG | 1 cut(s) | 32 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 12, 149, 158 |
| BstSCI | CCNGG | 1 cut(s) | 97 |
| BstV1I | GCAGC | 1 cut(s) | 152 |
| BstV2I | GAAGAC | 1 cut(s) | 73 |
| BsuRI | GGCC | 2 cut(s) | 15, 83 |
| BveI | ACCTGC | 1 cut(s) | 25 |
| Cac8I | GCNNGC | 1 cut(s) | 150 |
| Cfr10I | RCCGGY | 1 cut(s) | 27 |
| CspAI | ACCGGT | 1 cut(s) | 27 |
| CviJI | RGCY | 7 cut(s) | 6, 15, 44, 83, 148, 173, 181 |
| CviKI_1 | RGCY | 7 cut(s) | 6, 15, 44, 83, 148, 173, 181 |
| DdeI | CTNAG | 1 cut(s) | 182 |
| DpnI | GATC | 1 cut(s) | 103 |
| DpnII | GATC | 1 cut(s) | 101 |
| FaiI | YATR | 1 cut(s) | 176 |
| Fnu4HI | GCNGC | 1 cut(s) | 141 |
| Fsp4HI | GCNGC | 1 cut(s) | 141 |
| FspBI | CTAG | 1 cut(s) | 149 |
| GluI | GCNGC | 1 cut(s) | 141 |
| HaeIII | GGCC | 2 cut(s) | 15, 83 |
| HapII | CCGG | 2 cut(s) | 28, 99 |
| HincII | GTYRAC | 1 cut(s) | 25 |
| HindII | GTYRAC | 1 cut(s) | 25 |
| HpaII | CCGG | 2 cut(s) | 28, 99 |
| HphI | GGTGA | 1 cut(s) | 166 |
| Hpy166II | GTNNAC | 1 cut(s) | 25 |
| Hpy188III | TCNNGA | 1 cut(s) | 105 |
| Hpy8I | GTNNAC | 1 cut(s) | 25 |
| Hpy99I | CGWCG | 1 cut(s) | 76 |
| HpyAV | CCTTC | 1 cut(s) | 5 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 12, 149, 158 |
| HpyF3I | CTNAG | 1 cut(s) | 182 |
| Kzo9I | GATC | 1 cut(s) | 101 |
| LmnI | GCTCC | 1 cut(s) | 107 |
| LpnPI | CCDG | 4 cut(s) | 20, 41, 112, 118 |
| Lsp1109I | GCAGC | 1 cut(s) | 152 |
| LweI | GCATC | 1 cut(s) | 170 |
| MaeI | CTAG | 1 cut(s) | 149 |
| MalI | GATC | 1 cut(s) | 103 |
| MboI | GATC | 1 cut(s) | 101 |
| MboII | GAAGA | 1 cut(s) | 78 |
| MhlI | GDGCHC | 1 cut(s) | 112 |
| MluCI | AATT | 1 cut(s) | 90 |
| MnlI | CCTC | 6 cut(s) | 34, 126, 130, 130, 163, 181 |
| MspI | CCGG | 2 cut(s) | 28, 99 |
| MspR9I | CCNGG | 1 cut(s) | 99 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 12, 149, 158 |
| NciI | CCSGG | 1 cut(s) | 99 |
| NdeII | GATC | 1 cut(s) | 101 |
| NheI | GCTAGC | 1 cut(s) | 148 |
| PinAI | ACCGGT | 1 cut(s) | 27 |
| PkrI | GCNGC | 1 cut(s) | 142 |
| SatI | GCNGC | 1 cut(s) | 141 |
| Sau3AI | GATC | 1 cut(s) | 101 |
| ScrFI | CCNGG | 1 cut(s) | 99 |
| SduI | GDGCHC | 1 cut(s) | 112 |
| SetI | ASST | 2 cut(s) | 39, 118 |
| SfaNI | GCATC | 1 cut(s) | 170 |
| Sse9I | AATT | 1 cut(s) | 90 |
| SsiI | CCGC | 1 cut(s) | 152 |
| SspMI | CTAG | 1 cut(s) | 149 |
| StyD4I | CCNGG | 1 cut(s) | 97 |
| TaqI | TCGA | 2 cut(s) | 39, 53 |
| TaqII | GACCGA | 1 cut(s) | 85 |
| TasI | AATT | 1 cut(s) | 90 |
| TseI | GCWGC | 1 cut(s) | 140 |
| XspI | CTAG | 1 cut(s) | 149 |