Alpha-trehalose glucohydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g35240 FvH4_4g24650 FvH4_6g07961 |
| rosa_chinensis | RchiOBHm_Chr5g0018421 RchiOBHm_Chr5g0035691 RchiOBHm_Chr6g0253311 |
| rosa_laevigata | RLG00000009282 RLG00000024808 |
| rosa_roxburghii | Rroxscaffold_1G00038440 Rroxscaffold_1G00044810 Rroxscaffold_1G00044930 Rroxscaffold_2G00155750 Rroxscaffold_3G00252240 Rroxscaffold_6G00408950 Rroxscaffold_6G00413390 Rroxscaffold_7G00174630 |
| rosa_rugosa | Rorug01G0185800.1 Rorug01G0241800 Rorug02G0382700 Rorug05G0151800 Rorug05G0329200 Rorug06G0052300 |
| rosa_samantha | Rh1AG252700 Rh1BG044700 Rh1CG091300 Rh2AG510700 Rh2DG310500 Rh5BG244900 Rh5BG245900 Rh5CG146100 Rh5CG276500 Rh5DG254400 Rh7AG208000 Rh7CG278600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 144 |
| AgsI | TTSAA | 2 cut(s) | 42, 116 |
| AjnI | CCWGG | 1 cut(s) | 26 |
| Alw26I | GTCTC | 1 cut(s) | 118 |
| AoxI | GGCC | 1 cut(s) | 29 |
| BccI | CCATC | 1 cut(s) | 125 |
| BciT130I | CCWGG | 1 cut(s) | 28 |
| BcoDI | GTCTC | 1 cut(s) | 118 |
| Bme1390I | CCNGG | 1 cut(s) | 28 |
| BmiI | GGNNCC | 1 cut(s) | 20 |
| BmrFI | CCNGG | 1 cut(s) | 28 |
| BsaJI | CCNNGG | 1 cut(s) | 26 |
| Bse1I | ACTGG | 1 cut(s) | 132 |
| Bse3DI | GCAATG | 1 cut(s) | 18 |
| BseBI | CCWGG | 1 cut(s) | 28 |
| BseDI | CCNNGG | 1 cut(s) | 26 |
| BseGI | GGATG | 1 cut(s) | 136 |
| BseMI | GCAATG | 1 cut(s) | 18 |
| BseNI | ACTGG | 1 cut(s) | 132 |
| BshFI | GGCC | 1 cut(s) | 31 |
| BsmAI | GTCTC | 1 cut(s) | 118 |
| BsnI | GGCC | 1 cut(s) | 31 |
| Bsp143I | GATC | 1 cut(s) | 69 |
| BspANI | GGCC | 1 cut(s) | 31 |
| BspLI | GGNNCC | 1 cut(s) | 20 |
| BsrDI | GCAATG | 1 cut(s) | 18 |
| BsrI | ACTGG | 1 cut(s) | 132 |
| BssECI | CCNNGG | 1 cut(s) | 26 |
| BssMI | GATC | 1 cut(s) | 69 |
| Bst2UI | CCWGG | 1 cut(s) | 28 |
| BstF5I | GGATG | 1 cut(s) | 136 |
| BstKTI | GATC | 1 cut(s) | 72 |
| BstMAI | GTCTC | 1 cut(s) | 118 |
| BstMBI | GATC | 1 cut(s) | 69 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 118 |
| BstNI | CCWGG | 1 cut(s) | 28 |
| BstSCI | CCNGG | 1 cut(s) | 26 |
| BsuRI | GGCC | 1 cut(s) | 31 |
| BtsCI | GGATG | 1 cut(s) | 136 |
| BtsIMutI | CAGTG | 1 cut(s) | 45 |
| Csp6I | GTAC | 1 cut(s) | 143 |
| CviJI | RGCY | 2 cut(s) | 31, 112 |
| CviKI_1 | RGCY | 2 cut(s) | 31, 112 |
| CviQI | GTAC | 1 cut(s) | 143 |
| DpnI | GATC | 1 cut(s) | 71 |
| DpnII | GATC | 1 cut(s) | 69 |
| Eco147I | AGGCCT | 1 cut(s) | 31 |
| EcoRII | CCWGG | 1 cut(s) | 26 |
| FaiI | YATR | 2 cut(s) | 9, 68 |
| FokI | GGATG | 1 cut(s) | 143 |
| HaeIII | GGCC | 1 cut(s) | 31 |
| HinfI | GANTC | 1 cut(s) | 35 |
| Hpy188I | TCNGA | 1 cut(s) | 85 |
| Hpy188III | TCNNGA | 1 cut(s) | 73 |
| HpyCH4V | TGCA | 2 cut(s) | 11, 104 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 118 |
| Kzo9I | GATC | 1 cut(s) | 69 |
| LpnPI | CCDG | 5 cut(s) | 13, 40, 45, 113, 134 |
| MalI | GATC | 1 cut(s) | 71 |
| MboI | GATC | 1 cut(s) | 69 |
| MboII | GAAGA | 1 cut(s) | 30 |
| MspR9I | CCNGG | 1 cut(s) | 28 |
| MvaI | CCWGG | 1 cut(s) | 28 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 118 |
| NdeII | GATC | 1 cut(s) | 69 |
| NlaIV | GGNNCC | 1 cut(s) | 20 |
| NmeAIII | GCCGAG | 1 cut(s) | 147 |
| PceI | AGGCCT | 1 cut(s) | 31 |
| PfeI | GAWTC | 1 cut(s) | 35 |
| Psp6I | CCWGG | 1 cut(s) | 26 |
| PspGI | CCWGG | 1 cut(s) | 26 |
| PspN4I | GGNNCC | 1 cut(s) | 20 |
| RsaI | GTAC | 1 cut(s) | 144 |
| RsaNI | GTAC | 1 cut(s) | 143 |
| Sau3AI | GATC | 1 cut(s) | 69 |
| ScrFI | CCNGG | 1 cut(s) | 28 |
| SgeI | CNNG | 9 cut(s) | 39, 40, 44, 64, 71, 85, 97, 135, 140 |
| SseBI | AGGCCT | 1 cut(s) | 31 |
| StuI | AGGCCT | 1 cut(s) | 31 |
| StyD4I | CCNGG | 1 cut(s) | 26 |
| TaqI | TCGA | 1 cut(s) | 72 |
| TatI | WGTACW | 1 cut(s) | 142 |
| TfiI | GAWTC | 1 cut(s) | 35 |
| TscAI | CASTG | 1 cut(s) | 52 |
| TspRI | CASTG | 1 cut(s) | 52 |