Cytochrome c-type biogenesis ccda-like chloroplastic protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 494 |
| AciI | CCGC | 2 cut(s) | 313, 835 |
| AclWI | GGATC | 4 cut(s) | 385, 839, 852, 1064 |
| AcoI | YGGCCR | 2 cut(s) | 862, 1026 |
| AcsI | RAATTY | 4 cut(s) | 201, 342, 952, 1144 |
| AcuI | CTGAAG | 1 cut(s) | 407 |
| AfaI | GTAC | 1 cut(s) | 908 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 916, 931, 1181 |
| AflII | CTTAAG | 1 cut(s) | 254 |
| AgsI | TTSAA | 4 cut(s) | 206, 578, 674, 1229 |
| AjnI | CCWGG | 3 cut(s) | 1008, 1089, 1198 |
| Alw21I | GWGCWC | 1 cut(s) | 19 |
| Alw26I | GTCTC | 4 cut(s) | 691, 729, 929, 1190 |
| AlwI | GGATC | 4 cut(s) | 385, 839, 852, 1064 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 101 |
| AoxI | GGCC | 3 cut(s) | 862, 1026, 1056 |
| ApeKI | GCWGC | 9 cut(s) | 173, 209, 320, 418, 427, 581, 635, 656, 659 |
| ApoI | RAATTY | 4 cut(s) | 201, 342, 952, 1144 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 125, 157 |
| AspS9I | GGNCC | 1 cut(s) | 646 |
| AsuHPI | GGTGA | 6 cut(s) | 50, 533, 914, 1150, 1175, 1204 |
| AvaII | GGWCC | 1 cut(s) | 646 |
| AxyI | CCTNAGG | 1 cut(s) | 1176 |
| BalI | TGGCCA | 2 cut(s) | 864, 1028 |
| BamHI | GGATCC | 1 cut(s) | 844 |
| BauI | CACGAG | 1 cut(s) | 18 |
| Bbv12I | GWGCWC | 1 cut(s) | 19 |
| BbvI | GCAGC | 9 cut(s) | 160, 196, 307, 430, 439, 568, 646, 647, 668 |
| BccI | CCATC | 1 cut(s) | 782 |
| BciT130I | CCWGG | 3 cut(s) | 1010, 1091, 1200 |
| BclI | TGATCA | 2 cut(s) | 618, 1165 |
| BcoDI | GTCTC | 4 cut(s) | 691, 729, 929, 1190 |
| BfaI | CTAG | 1 cut(s) | 911 |
| BfmI | CTRYAG | 2 cut(s) | 265, 321 |
| BfrI | CTTAAG | 1 cut(s) | 254 |
| BglII | AGATCT | 1 cut(s) | 1083 |
| BisI | GCNGC | 9 cut(s) | 174, 210, 321, 419, 428, 582, 636, 657, 660 |
| BlpI | GCTNAGC | 1 cut(s) | 316 |
| BlsI | GCNGC | 9 cut(s) | 175, 211, 322, 420, 429, 583, 637, 658, 661 |
| Bme1390I | CCNGG | 3 cut(s) | 1010, 1091, 1200 |
| Bme18I | GGWCC | 1 cut(s) | 646 |
| BmgT120I | GGNCC | 1 cut(s) | 646 |
| BmiI | GGNNCC | 2 cut(s) | 647, 846 |
| BmrFI | CCNGG | 3 cut(s) | 1010, 1091, 1200 |
| BmrI | ACTGGG | 1 cut(s) | 281 |
| BmsI | GCATC | 2 cut(s) | 643, 1185 |
| BmuI | ACTGGG | 1 cut(s) | 281 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1227, 1259 |
| BpmI | CTGGAG | 2 cut(s) | 33, 855 |
| Bpu10I | CCTNAGC | 1 cut(s) | 482 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 316 |
| BsaI | GGTCTC | 2 cut(s) | 691, 1190 |
| BsaJI | CCNNGG | 1 cut(s) | 992 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1206, 1236 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 916, 931, 1181 |
| Bse118I | RCCGGY | 1 cut(s) | 518 |
| Bse1I | ACTGG | 4 cut(s) | 16, 287, 382, 1029 |
| Bse21I | CCTNAGG | 1 cut(s) | 1176 |
| BseBI | CCWGG | 3 cut(s) | 1010, 1091, 1200 |
| BseDI | CCNNGG | 1 cut(s) | 992 |
| BseGI | GGATG | 3 cut(s) | 159, 988, 1162 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 916, 931, 1181 |
| BseMII | CTCAG | 2 cut(s) | 222, 378 |
| BseNI | ACTGG | 4 cut(s) | 16, 287, 382, 1029 |
| BseRI | GAGGAG | 1 cut(s) | 452 |
| BseXI | GCAGC | 9 cut(s) | 160, 196, 307, 430, 439, 568, 646, 647, 668 |
| BseYI | CCCAGC | 2 cut(s) | 281, 638 |
| Bsh1285I | CGRYCG | 1 cut(s) | 681 |
| BshFI | GGCC | 3 cut(s) | 864, 1028, 1058 |
| BsiEI | CGRYCG | 1 cut(s) | 681 |
| BsiHKAI | GWGCWC | 1 cut(s) | 19 |
| BsiSI | CCGG | 1 cut(s) | 519 |
| BslFI | GGGAC | 3 cut(s) | 127, 659, 851 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 916, 931, 1181 |
| BsmAI | GTCTC | 4 cut(s) | 691, 729, 929, 1190 |
| BsmFI | GGGAC | 3 cut(s) | 127, 659, 851 |
| BsnI | GGCC | 3 cut(s) | 864, 1028, 1058 |
| Bso31I | GGTCTC | 2 cut(s) | 691, 1190 |
| Bsp1286I | GDGCHC | 1 cut(s) | 19 |
| Bsp143I | GATC | 8 cut(s) | 390, 556, 618, 844, 958, 1069, 1083, 1165 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 316 |
| BspACI | CCGC | 2 cut(s) | 313, 835 |
| BspANI | GGCC | 3 cut(s) | 864, 1028, 1058 |
| BspCNI | CTCAG | 2 cut(s) | 223, 379 |
| BspHI | TCATGA | 1 cut(s) | 598 |
| BspLI | GGNNCC | 2 cut(s) | 647, 846 |
| BspMAI | CTGCAG | 1 cut(s) | 325 |
| BspPI | GGATC | 4 cut(s) | 385, 839, 852, 1064 |
| BspTI | CTTAAG | 1 cut(s) | 254 |
| BspTNI | GGTCTC | 2 cut(s) | 691, 1190 |
| BsrFI | RCCGGY | 1 cut(s) | 518 |
| BsrI | ACTGG | 4 cut(s) | 16, 287, 382, 1029 |
| BssAI | RCCGGY | 1 cut(s) | 518 |
| BssECI | CCNNGG | 1 cut(s) | 992 |
| BssMI | GATC | 8 cut(s) | 390, 556, 618, 844, 958, 1069, 1083, 1165 |
| BssSI | CACGAG | 1 cut(s) | 18 |
| BssT1I | CCWWGG | 1 cut(s) | 992 |
| Bst2BI | CACGAG | 1 cut(s) | 18 |
| Bst2UI | CCWGG | 3 cut(s) | 1010, 1091, 1200 |
| Bst4CI | ACNGT | 1 cut(s) | 682 |
| Bst6I | CTCTTC | 2 cut(s) | 69, 566 |
| BstAFI | CTTAAG | 1 cut(s) | 254 |
| BstC8I | GCNNGC | 1 cut(s) | 456 |
| BstDEI | CTNAG | 7 cut(s) | 120, 231, 316, 387, 459, 482, 1176 |
| BstF5I | GGATG | 3 cut(s) | 159, 988, 1162 |
| BstKTI | GATC | 8 cut(s) | 393, 559, 621, 847, 961, 1072, 1086, 1168 |
| BstMAI | GTCTC | 4 cut(s) | 691, 729, 929, 1190 |
| BstMBI | GATC | 8 cut(s) | 390, 556, 618, 844, 958, 1069, 1083, 1165 |
| BstMCI | CGRYCG | 1 cut(s) | 681 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 107, 424, 427, 590 |
| BstNI | CCWGG | 3 cut(s) | 1010, 1091, 1200 |
| BstNSI | RCATGY | 1 cut(s) | 859 |
| BstSCI | CCNGG | 3 cut(s) | 1008, 1089, 1198 |
| BstSFI | CTRYAG | 2 cut(s) | 265, 321 |
| BstV1I | GCAGC | 9 cut(s) | 160, 196, 307, 430, 439, 568, 646, 647, 668 |
| BstX2I | RGATCY | 3 cut(s) | 390, 844, 1083 |
| BstYI | RGATCY | 3 cut(s) | 390, 844, 1083 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1176 |
| BsuRI | GGCC | 3 cut(s) | 864, 1028, 1058 |
| BtsCI | GGATG | 3 cut(s) | 159, 988, 1162 |
| BtsI | GCAGTG | 1 cut(s) | 1225 |
| BtsIMutI | CAGTG | 3 cut(s) | 9, 754, 1225 |
| Cac8I | GCNNGC | 1 cut(s) | 456 |
| CaiI | CAGNNNCTG | 1 cut(s) | 101 |
| CciI | TCATGA | 1 cut(s) | 598 |
| Cfr10I | RCCGGY | 1 cut(s) | 518 |
| Cfr13I | GGNCC | 1 cut(s) | 646 |
| Csp6I | GTAC | 1 cut(s) | 907 |
| CviAII | CATG | 8 cut(s) | 415, 599, 625, 841, 856, 1076, 1126, 1189 |
| CviQI | GTAC | 1 cut(s) | 907 |
| DdeI | CTNAG | 7 cut(s) | 120, 231, 316, 387, 459, 482, 1176 |
| DpnI | GATC | 8 cut(s) | 392, 558, 620, 846, 960, 1071, 1085, 1167 |
| DpnII | GATC | 8 cut(s) | 390, 556, 618, 844, 958, 1069, 1083, 1165 |
| EaeI | YGGCCR | 2 cut(s) | 862, 1026 |
| Eam1104I | CTCTTC | 2 cut(s) | 69, 566 |
| EarI | CTCTTC | 2 cut(s) | 69, 566 |
| Eco130I | CCWWGG | 1 cut(s) | 992 |
| Eco31I | GGTCTC | 2 cut(s) | 691, 1190 |
| Eco32I | GATATC | 1 cut(s) | 117 |
| Eco47I | GGWCC | 1 cut(s) | 646 |
| Eco57I | CTGAAG | 1 cut(s) | 407 |
| Eco81I | CCTNAGG | 1 cut(s) | 1176 |
| EcoO109I | RGGNCCY | 1 cut(s) | 646 |
| EcoRII | CCWGG | 3 cut(s) | 1008, 1089, 1198 |
| EcoRV | GATATC | 1 cut(s) | 117 |
| EcoT14I | CCWWGG | 1 cut(s) | 992 |
| EcoT22I | ATGCAT | 1 cut(s) | 718 |
| ErhI | CCWWGG | 1 cut(s) | 992 |
| FaeI | CATG | 8 cut(s) | 418, 602, 628, 844, 859, 1079, 1129, 1192 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 794, 826 |
| FaqI | GGGAC | 3 cut(s) | 127, 659, 851 |
| FatI | CATG | 8 cut(s) | 414, 598, 624, 840, 855, 1075, 1125, 1188 |
| FauI | CCCGC | 2 cut(s) | 320, 828 |
| FbaI | TGATCA | 2 cut(s) | 618, 1165 |
| FblI | GTMKAC | 1 cut(s) | 494 |
| Fnu4HI | GCNGC | 9 cut(s) | 174, 210, 321, 419, 428, 582, 636, 657, 660 |
| FokI | GGATG | 3 cut(s) | 146, 975, 1169 |
| Fsp4HI | GCNGC | 9 cut(s) | 174, 210, 321, 419, 428, 582, 636, 657, 660 |
| FspBI | CTAG | 1 cut(s) | 911 |
| GluI | GCNGC | 9 cut(s) | 174, 210, 321, 419, 428, 582, 636, 657, 660 |
| GsaI | CCCAGC | 2 cut(s) | 285, 642 |
| GsuI | CTGGAG | 2 cut(s) | 33, 855 |
| HaeIII | GGCC | 3 cut(s) | 864, 1028, 1058 |
| HapII | CCGG | 1 cut(s) | 519 |
| Hin1II | CATG | 8 cut(s) | 418, 602, 628, 844, 859, 1079, 1129, 1192 |
| HindIII | AAGCTT | 3 cut(s) | 479, 510, 766 |
| HpaII | CCGG | 1 cut(s) | 519 |
| HphI | GGTGA | 6 cut(s) | 50, 533, 914, 1150, 1175, 1204 |
| Hpy166II | GTNNAC | 4 cut(s) | 58, 495, 922, 1123 |
| Hpy188I | TCNGA | 8 cut(s) | 90, 232, 250, 388, 409, 508, 784, 1117 |
| Hpy188III | TCNNGA | 4 cut(s) | 95, 394, 599, 872 |
| Hpy8I | GTNNAC | 4 cut(s) | 58, 495, 922, 1123 |
| HpyAV | CCTTC | 3 cut(s) | 46, 1154, 1249 |
| HpyCH4III | ACNGT | 1 cut(s) | 682 |
| HpyCH4V | TGCA | 8 cut(s) | 323, 418, 584, 656, 692, 716, 897, 1048 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 107, 424, 427, 590 |
| HpyF3I | CTNAG | 7 cut(s) | 120, 231, 316, 387, 459, 482, 1176 |
| Hsp92II | CATG | 8 cut(s) | 418, 602, 628, 844, 859, 1079, 1129, 1192 |
| Ksp22I | TGATCA | 2 cut(s) | 618, 1165 |
| Kzo9I | GATC | 8 cut(s) | 390, 556, 618, 844, 958, 1069, 1083, 1165 |
| LmnI | GCTCC | 3 cut(s) | 14, 171, 900 |
| Lsp1109I | GCAGC | 9 cut(s) | 160, 196, 307, 430, 439, 568, 646, 647, 668 |
| LweI | GCATC | 2 cut(s) | 643, 1185 |
| MaeI | CTAG | 1 cut(s) | 911 |
| MalI | GATC | 8 cut(s) | 392, 558, 620, 846, 960, 1071, 1085, 1167 |
| MboI | GATC | 8 cut(s) | 390, 556, 618, 844, 958, 1069, 1083, 1165 |
| MboII | GAAGA | 5 cut(s) | 86, 553, 805, 1078, 1153 |
| MfeI | CAATTG | 1 cut(s) | 669 |
| MflI | RGATCY | 3 cut(s) | 390, 844, 1083 |
| MhlI | GDGCHC | 1 cut(s) | 19 |
| MlsI | TGGCCA | 2 cut(s) | 864, 1028 |
| MluCI | AATT | 6 cut(s) | 201, 342, 669, 821, 952, 1144 |
| MluNI | TGGCCA | 2 cut(s) | 864, 1028 |
| MlyI | GAGTC | 3 cut(s) | 86, 731, 991 |
| MmeI | TCCRAC | 2 cut(s) | 444, 1192 |
| MnlI | CCTC | 8 cut(s) | 254, 430, 433, 711, 1083, 1092, 1111, 1208 |
| Mox20I | TGGCCA | 2 cut(s) | 864, 1028 |
| Mph1103I | ATGCAT | 1 cut(s) | 718 |
| MscI | TGGCCA | 2 cut(s) | 864, 1028 |
| MseI | TTAA | 5 cut(s) | 255, 372, 548, 1019, 1095 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1193 |
| Msp20I | TGGCCA | 2 cut(s) | 864, 1028 |
| MspA1I | CMGCKG | 2 cut(s) | 638, 659 |
| MspCI | CTTAAG | 1 cut(s) | 254 |
| MspI | CCGG | 1 cut(s) | 519 |
| MspR9I | CCNGG | 3 cut(s) | 1010, 1091, 1200 |
| MunI | CAATTG | 1 cut(s) | 669 |
| MvaI | CCWGG | 3 cut(s) | 1010, 1091, 1200 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 107, 424, 427, 590 |
| NdeII | GATC | 8 cut(s) | 390, 556, 618, 844, 958, 1069, 1083, 1165 |
| NlaIII | CATG | 8 cut(s) | 418, 602, 628, 844, 859, 1079, 1129, 1192 |
| NlaIV | GGNNCC | 2 cut(s) | 647, 846 |
| NsiI | ATGCAT | 1 cut(s) | 718 |
| NspI | RCATGY | 1 cut(s) | 859 |
| PagI | TCATGA | 1 cut(s) | 598 |
| PfeI | GAWTC | 7 cut(s) | 85, 91, 308, 404, 503, 875, 1225 |
| PkrI | GCNGC | 9 cut(s) | 175, 211, 322, 420, 429, 583, 637, 658, 661 |
| PleI | GAGTC | 3 cut(s) | 85, 730, 991 |
| PpsI | GAGTC | 3 cut(s) | 85, 730, 991 |
| PpuMI | RGGWCCY | 1 cut(s) | 646 |
| Psp5II | RGGWCCY | 1 cut(s) | 646 |
| Psp6I | CCWGG | 3 cut(s) | 1008, 1089, 1198 |
| PspFI | CCCAGC | 2 cut(s) | 281, 638 |
| PspGI | CCWGG | 3 cut(s) | 1008, 1089, 1198 |
| PspN4I | GGNNCC | 2 cut(s) | 647, 846 |
| PspPI | GGNCC | 1 cut(s) | 646 |
| PspPPI | RGGWCCY | 1 cut(s) | 646 |
| PstI | CTGCAG | 1 cut(s) | 325 |
| PstNI | CAGNNNCTG | 1 cut(s) | 101 |
| PsuI | RGATCY | 3 cut(s) | 390, 844, 1083 |
| PvuII | CAGCTG | 2 cut(s) | 638, 659 |
| RsaI | GTAC | 1 cut(s) | 908 |
| RsaNI | GTAC | 1 cut(s) | 907 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1193 |
| SaqAI | TTAA | 5 cut(s) | 255, 372, 548, 1019, 1095 |
| SatI | GCNGC | 9 cut(s) | 174, 210, 321, 419, 428, 582, 636, 657, 660 |
| Sau3AI | GATC | 8 cut(s) | 390, 556, 618, 844, 958, 1069, 1083, 1165 |
| Sau96I | GGNCC | 1 cut(s) | 646 |
| SchI | GAGTC | 3 cut(s) | 86, 731, 991 |
| ScrFI | CCNGG | 3 cut(s) | 1010, 1091, 1200 |
| SduI | GDGCHC | 1 cut(s) | 19 |
| SfaNI | GCATC | 2 cut(s) | 643, 1185 |
| SfcI | CTRYAG | 2 cut(s) | 265, 321 |
| SinI | GGWCC | 1 cut(s) | 646 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1193 |
| SmlI | CTYRAG | 1 cut(s) | 254 |
| SmoI | CTYRAG | 1 cut(s) | 254 |
| Sse9I | AATT | 6 cut(s) | 201, 342, 669, 821, 952, 1144 |
| SsiI | CCGC | 2 cut(s) | 313, 835 |
| SspMI | CTAG | 1 cut(s) | 911 |
| StyD4I | CCNGG | 3 cut(s) | 1008, 1089, 1198 |
| StyI | CCWWGG | 1 cut(s) | 992 |
| TaaI | ACNGT | 1 cut(s) | 682 |
| TaqI | TCGA | 1 cut(s) | 1234 |
| TasI | AATT | 6 cut(s) | 201, 342, 669, 821, 952, 1144 |
| TfiI | GAWTC | 7 cut(s) | 85, 91, 308, 404, 503, 875, 1225 |
| Tru1I | TTAA | 5 cut(s) | 255, 372, 548, 1019, 1095 |
| Tru9I | TTAA | 5 cut(s) | 255, 372, 548, 1019, 1095 |
| TscAI | CASTG | 3 cut(s) | 16, 754, 1225 |
| TseI | GCWGC | 9 cut(s) | 173, 209, 320, 418, 427, 581, 635, 656, 659 |
| TspDTI | ATGAA | 6 cut(s) | 98, 587, 644, 930, 1173, 1268 |
| TspGWI | ACGGA | 2 cut(s) | 23, 990 |
| TspRI | CASTG | 3 cut(s) | 16, 754, 1225 |
| Vha464I | CTTAAG | 1 cut(s) | 254 |
| VpaK11BI | GGWCC | 1 cut(s) | 646 |
| XapI | RAATTY | 4 cut(s) | 201, 342, 952, 1144 |
| XceI | RCATGY | 1 cut(s) | 859 |
| XmiI | GTMKAC | 1 cut(s) | 494 |
| XspI | CTAG | 1 cut(s) | 911 |
| Zsp2I | ATGCAT | 1 cut(s) | 718 |