No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SWIM | PF04434 | 304 - 331 | 1.3e-08 | SWIM zinc finger |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 401, 938 |
| AccI | GTMKAC | 2 cut(s) | 156, 394 |
| AccIII | TCCGGA | 1 cut(s) | 1009 |
| AciI | CCGC | 1 cut(s) | 242 |
| AclWI | GGATC | 2 cut(s) | 480, 1001 |
| AcoI | YGGCCR | 1 cut(s) | 1264 |
| AcuI | CTGAAG | 1 cut(s) | 822 |
| AcvI | CACGTG | 1 cut(s) | 874 |
| AdeI | CACNNNGTG | 1 cut(s) | 1273 |
| AfaI | GTAC | 4 cut(s) | 206, 465, 560, 810 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 108, 360, 877, 946, 1085 |
| AflII | CTTAAG | 1 cut(s) | 952 |
| AflIII | ACRYGT | 1 cut(s) | 1280 |
| AgsI | TTSAA | 6 cut(s) | 196, 238, 667, 893, 1240, 1415 |
| AjnI | CCWGG | 2 cut(s) | 353, 1377 |
| Alw21I | GWGCWC | 1 cut(s) | 223 |
| Alw26I | GTCTC | 3 cut(s) | 31, 878, 985 |
| AlwI | GGATC | 2 cut(s) | 480, 1001 |
| Aor13HI | TCCGGA | 1 cut(s) | 1009 |
| AoxI | GGCC | 3 cut(s) | 584, 1157, 1264 |
| ApeKI | GCWGC | 4 cut(s) | 59, 833, 1199, 1316 |
| AspS9I | GGNCC | 2 cut(s) | 139, 927 |
| AsuC2I | CCSGG | 4 cut(s) | 110, 456, 856, 1152 |
| AsuHPI | GGTGA | 1 cut(s) | 878 |
| AvaII | GGWCC | 2 cut(s) | 139, 927 |
| BaeGI | GKGCMC | 1 cut(s) | 794 |
| BalI | TGGCCA | 1 cut(s) | 1266 |
| BanII | GRGCYC | 1 cut(s) | 223 |
| BbrPI | CACGTG | 1 cut(s) | 874 |
| BbsI | GAAGAC | 2 cut(s) | 1020, 1283 |
| Bbv12I | GWGCWC | 1 cut(s) | 223 |
| BbvI | GCAGC | 4 cut(s) | 71, 820, 1186, 1303 |
| BccI | CCATC | 4 cut(s) | 31, 92, 331, 398 |
| BceAI | ACGGC | 1 cut(s) | 266 |
| BciT130I | CCWGG | 2 cut(s) | 355, 1379 |
| BclI | TGATCA | 2 cut(s) | 642, 1071 |
| BcnI | CCSGG | 4 cut(s) | 110, 456, 856, 1152 |
| BcoDI | GTCTC | 3 cut(s) | 31, 878, 985 |
| BfaI | CTAG | 6 cut(s) | 266, 368, 687, 801, 812, 1143 |
| BfrI | CTTAAG | 1 cut(s) | 952 |
| BfuAI | ACCTGC | 2 cut(s) | 401, 938 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1156 |
| BglII | AGATCT | 1 cut(s) | 268 |
| BisI | GCNGC | 4 cut(s) | 60, 834, 1200, 1317 |
| BlsI | GCNGC | 4 cut(s) | 61, 835, 1201, 1318 |
| BmcAI | AGTACT | 1 cut(s) | 810 |
| Bme1390I | CCNGG | 6 cut(s) | 110, 355, 456, 856, 1152, 1379 |
| Bme18I | GGWCC | 2 cut(s) | 139, 927 |
| BmgT120I | GGNCC | 2 cut(s) | 139, 927 |
| BmiI | GGNNCC | 2 cut(s) | 82, 141 |
| BmrFI | CCNGG | 6 cut(s) | 110, 355, 456, 856, 1152, 1379 |
| BmsI | GCATC | 3 cut(s) | 283, 673, 756 |
| BpiI | GAAGAC | 2 cut(s) | 1020, 1283 |
| BpuEI | CTTGAG | 1 cut(s) | 419 |
| BpuMI | CCSGG | 4 cut(s) | 110, 456, 856, 1152 |
| BsaAI | YACGTR | 1 cut(s) | 874 |
| BsaBI | GATNNNNATC | 1 cut(s) | 206 |
| BsaI | GGTCTC | 1 cut(s) | 31 |
| BsaJI | CCNNGG | 2 cut(s) | 455, 1377 |
| BsaWI | WCCGGW | 1 cut(s) | 1009 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1093, 1123 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 108, 360, 877, 946, 1085 |
| Bse1I | ACTGG | 1 cut(s) | 701 |
| Bse3DI | GCAATG | 3 cut(s) | 333, 388, 780 |
| Bse8I | GATNNNNATC | 1 cut(s) | 206 |
| BseAI | TCCGGA | 1 cut(s) | 1009 |
| BseBI | CCWGG | 2 cut(s) | 355, 1379 |
| BseDI | CCNNGG | 2 cut(s) | 455, 1377 |
| BseGI | GGATG | 4 cut(s) | 207, 251, 409, 573 |
| BseJI | GATNNNNATC | 1 cut(s) | 206 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 108, 360, 877, 946, 1085 |
| BseMI | GCAATG | 3 cut(s) | 333, 388, 780 |
| BseMII | CTCAG | 2 cut(s) | 380, 996 |
| BseNI | ACTGG | 1 cut(s) | 701 |
| BseRI | GAGGAG | 1 cut(s) | 545 |
| BseSI | GKGCMC | 1 cut(s) | 794 |
| BseXI | GCAGC | 4 cut(s) | 71, 820, 1186, 1303 |
| BsgI | GTGCAG | 1 cut(s) | 916 |
| BshFI | GGCC | 3 cut(s) | 586, 1159, 1266 |
| BsiHKAI | GWGCWC | 1 cut(s) | 223 |
| BsiSI | CCGG | 5 cut(s) | 109, 455, 855, 1010, 1152 |
| BslFI | GGGAC | 1 cut(s) | 962 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 108, 360, 877, 946, 1085 |
| BsmAI | GTCTC | 3 cut(s) | 31, 878, 985 |
| BsmFI | GGGAC | 1 cut(s) | 962 |
| BsnI | GGCC | 3 cut(s) | 586, 1159, 1266 |
| Bso31I | GGTCTC | 1 cut(s) | 31 |
| Bsp1286I | GDGCHC | 2 cut(s) | 223, 794 |
| Bsp13I | TCCGGA | 1 cut(s) | 1009 |
| Bsp1407I | TGTACA | 1 cut(s) | 204 |
| Bsp143I | GATC | 5 cut(s) | 268, 472, 642, 1006, 1071 |
| BspACI | CCGC | 1 cut(s) | 242 |
| BspANI | GGCC | 3 cut(s) | 586, 1159, 1266 |
| BspCNI | CTCAG | 2 cut(s) | 381, 995 |
| BspEI | TCCGGA | 1 cut(s) | 1009 |
| BspLI | GGNNCC | 2 cut(s) | 82, 141 |
| BspMI | ACCTGC | 2 cut(s) | 401, 938 |
| BspPI | GGATC | 2 cut(s) | 480, 1001 |
| BspTI | CTTAAG | 1 cut(s) | 952 |
| BspTNI | GGTCTC | 1 cut(s) | 31 |
| BsrDI | GCAATG | 3 cut(s) | 333, 388, 780 |
| BsrGI | TGTACA | 1 cut(s) | 204 |
| BsrI | ACTGG | 1 cut(s) | 701 |
| BssECI | CCNNGG | 2 cut(s) | 455, 1377 |
| BssMI | GATC | 5 cut(s) | 268, 472, 642, 1006, 1071 |
| BssNAI | GTATAC | 1 cut(s) | 395 |
| Bst1107I | GTATAC | 1 cut(s) | 395 |
| Bst2UI | CCWGG | 2 cut(s) | 355, 1379 |
| Bst4CI | ACNGT | 2 cut(s) | 154, 1137 |
| Bst6I | CTCTTC | 2 cut(s) | 734, 1216 |
| BstAFI | CTTAAG | 1 cut(s) | 952 |
| BstAUI | TGTACA | 1 cut(s) | 204 |
| BstBAI | YACGTR | 1 cut(s) | 874 |
| BstC8I | GCNNGC | 4 cut(s) | 771, 971, 975, 1314 |
| BstDEI | CTNAG | 2 cut(s) | 389, 982 |
| BstEII | GGTNACC | 1 cut(s) | 866 |
| BstF5I | GGATG | 4 cut(s) | 207, 251, 409, 573 |
| BstKTI | GATC | 5 cut(s) | 271, 475, 645, 1009, 1074 |
| BstMAI | GTCTC | 3 cut(s) | 31, 878, 985 |
| BstMBI | GATC | 5 cut(s) | 268, 472, 642, 1006, 1071 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 592, 983, 1156 |
| BstNI | CCWGG | 2 cut(s) | 355, 1379 |
| BstNSI | RCATGY | 2 cut(s) | 939, 1284 |
| BstPI | GGTNACC | 1 cut(s) | 866 |
| BstSCI | CCNGG | 6 cut(s) | 108, 353, 454, 854, 1150, 1377 |
| BstSLI | GKGCMC | 1 cut(s) | 794 |
| BstV1I | GCAGC | 4 cut(s) | 71, 820, 1186, 1303 |
| BstV2I | GAAGAC | 2 cut(s) | 1020, 1283 |
| BstX2I | RGATCY | 2 cut(s) | 268, 1006 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 597 |
| BstYI | RGATCY | 2 cut(s) | 268, 1006 |
| BstZ17I | GTATAC | 1 cut(s) | 395 |
| BsuRI | GGCC | 3 cut(s) | 586, 1159, 1266 |
| BtsCI | GGATG | 4 cut(s) | 207, 251, 409, 573 |
| BtsIMutI | CAGTG | 1 cut(s) | 708 |
| BveI | ACCTGC | 2 cut(s) | 401, 938 |
| Cac8I | GCNNGC | 4 cut(s) | 771, 971, 975, 1314 |
| Cfr13I | GGNCC | 2 cut(s) | 139, 927 |
| Csp6I | GTAC | 4 cut(s) | 205, 464, 559, 809 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 888, 923 |
| CviAII | CATG | 6 cut(s) | 88, 309, 654, 936, 966, 1281 |
| CviQI | GTAC | 4 cut(s) | 205, 464, 559, 809 |
| DdeI | CTNAG | 2 cut(s) | 389, 982 |
| DpnI | GATC | 5 cut(s) | 270, 474, 644, 1008, 1073 |
| DpnII | GATC | 5 cut(s) | 268, 472, 642, 1006, 1071 |
| DraIII | CACNNNGTG | 1 cut(s) | 1273 |
| EaeI | YGGCCR | 1 cut(s) | 1264 |
| Eam1104I | CTCTTC | 2 cut(s) | 734, 1216 |
| EarI | CTCTTC | 2 cut(s) | 734, 1216 |
| Ecl136II | GAGCTC | 1 cut(s) | 221 |
| Eco147I | AGGCCT | 1 cut(s) | 586 |
| Eco24I | GRGCYC | 1 cut(s) | 223 |
| Eco31I | GGTCTC | 1 cut(s) | 31 |
| Eco47I | GGWCC | 2 cut(s) | 139, 927 |
| Eco53kI | GAGCTC | 1 cut(s) | 221 |
| Eco57I | CTGAAG | 1 cut(s) | 822 |
| Eco72I | CACGTG | 1 cut(s) | 874 |
| Eco91I | GGTNACC | 1 cut(s) | 866 |
| EcoICRI | GAGCTC | 1 cut(s) | 221 |
| EcoO109I | RGGNCCY | 1 cut(s) | 927 |
| EcoO65I | GGTNACC | 1 cut(s) | 866 |
| EcoRII | CCWGG | 2 cut(s) | 353, 1377 |
| EcoT38I | GRGCYC | 1 cut(s) | 223 |
| FaeI | CATG | 6 cut(s) | 91, 312, 657, 939, 969, 1284 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 48, 80 |
| FaqI | GGGAC | 1 cut(s) | 962 |
| FatI | CATG | 6 cut(s) | 87, 308, 653, 935, 965, 1280 |
| FauI | CCCGC | 1 cut(s) | 235 |
| FbaI | TGATCA | 2 cut(s) | 642, 1071 |
| FblI | GTMKAC | 2 cut(s) | 156, 394 |
| Fnu4HI | GCNGC | 4 cut(s) | 60, 834, 1200, 1317 |
| FokI | GGATG | 4 cut(s) | 214, 258, 416, 580 |
| FriOI | GRGCYC | 1 cut(s) | 223 |
| Fsp4HI | GCNGC | 4 cut(s) | 60, 834, 1200, 1317 |
| FspBI | CTAG | 6 cut(s) | 266, 368, 687, 801, 812, 1143 |
| GluI | GCNGC | 4 cut(s) | 60, 834, 1200, 1317 |
| HaeIII | GGCC | 3 cut(s) | 586, 1159, 1266 |
| HapII | CCGG | 5 cut(s) | 109, 455, 855, 1010, 1152 |
| Hin1II | CATG | 6 cut(s) | 91, 312, 657, 939, 969, 1284 |
| HincII | GTYRAC | 3 cut(s) | 157, 498, 913 |
| HindII | GTYRAC | 3 cut(s) | 157, 498, 913 |
| HindIII | AAGCTT | 3 cut(s) | 182, 661, 1214 |
| HinfI | GANTC | 3 cut(s) | 105, 234, 350 |
| HpaII | CCGG | 5 cut(s) | 109, 455, 855, 1010, 1152 |
| HphI | GGTGA | 1 cut(s) | 878 |
| Hpy166II | GTNNAC | 7 cut(s) | 139, 157, 395, 446, 498, 913, 1327 |
| Hpy188I | TCNGA | 5 cut(s) | 10, 755, 841, 1189, 1390 |
| Hpy188III | TCNNGA | 6 cut(s) | 28, 274, 368, 883, 1010, 1143 |
| Hpy8I | GTNNAC | 7 cut(s) | 139, 157, 395, 446, 498, 913, 1327 |
| Hpy99I | CGWCG | 1 cut(s) | 158 |
| HpyAV | CCTTC | 7 cut(s) | 153, 454, 532, 823, 887, 1149, 1349 |
| HpyCH4III | ACNGT | 2 cut(s) | 154, 1137 |
| HpyCH4IV | ACGT | 6 cut(s) | 636, 873, 1046, 1272, 1402, 1433 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 592, 983, 1156 |
| HpyF3I | CTNAG | 2 cut(s) | 389, 982 |
| HpySE526I | ACGT | 6 cut(s) | 636, 873, 1046, 1272, 1402, 1433 |
| Hsp92II | CATG | 6 cut(s) | 91, 312, 657, 939, 969, 1284 |
| Kpn2I | TCCGGA | 1 cut(s) | 1009 |
| Ksp22I | TGATCA | 2 cut(s) | 642, 1071 |
| Kzo9I | GATC | 5 cut(s) | 268, 472, 642, 1006, 1071 |
| LmnI | GCTCC | 3 cut(s) | 91, 218, 407 |
| Lsp1109I | GCAGC | 4 cut(s) | 71, 820, 1186, 1303 |
| LweI | GCATC | 3 cut(s) | 283, 673, 756 |
| MaeI | CTAG | 6 cut(s) | 266, 368, 687, 801, 812, 1143 |
| MaeII | ACGT | 6 cut(s) | 636, 873, 1046, 1272, 1402, 1433 |
| MaeIII | GTNAC | 3 cut(s) | 632, 866, 1283 |
| MalI | GATC | 5 cut(s) | 270, 474, 644, 1008, 1073 |
| MboI | GATC | 5 cut(s) | 268, 472, 642, 1006, 1071 |
| MboII | GAAGA | 7 cut(s) | 184, 751, 1025, 1124, 1233, 1286, 1288 |
| MfeI | CAATTG | 1 cut(s) | 1249 |
| MflI | RGATCY | 2 cut(s) | 268, 1006 |
| MhlI | GDGCHC | 2 cut(s) | 223, 794 |
| MlsI | TGGCCA | 1 cut(s) | 1266 |
| MluCI | AATT | 7 cut(s) | 288, 315, 720, 1066, 1122, 1249, 1383 |
| MluNI | TGGCCA | 1 cut(s) | 1266 |
| MlyI | GAGTC | 2 cut(s) | 99, 344 |
| MmeI | TCCRAC | 3 cut(s) | 54, 265, 395 |
| MnlI | CCTC | 8 cut(s) | 70, 394, 523, 597, 709, 871, 1140, 1164 |
| Mox20I | TGGCCA | 1 cut(s) | 1266 |
| MroI | TCCGGA | 1 cut(s) | 1009 |
| MscI | TGGCCA | 1 cut(s) | 1266 |
| MseI | TTAA | 5 cut(s) | 225, 953, 1037, 1053, 1083 |
| Msp20I | TGGCCA | 1 cut(s) | 1266 |
| MspA1I | CMGCKG | 1 cut(s) | 1231 |
| MspCI | CTTAAG | 1 cut(s) | 952 |
| MspI | CCGG | 5 cut(s) | 109, 455, 855, 1010, 1152 |
| MspR9I | CCNGG | 6 cut(s) | 110, 355, 456, 856, 1152, 1379 |
| MunI | CAATTG | 1 cut(s) | 1249 |
| MvaI | CCWGG | 2 cut(s) | 355, 1379 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 592, 983, 1156 |
| NciI | CCSGG | 4 cut(s) | 110, 456, 856, 1152 |
| NdeII | GATC | 5 cut(s) | 268, 472, 642, 1006, 1071 |
| NlaIII | CATG | 6 cut(s) | 91, 312, 657, 939, 969, 1284 |
| NlaIV | GGNNCC | 2 cut(s) | 82, 141 |
| NmuCI | GTSAC | 3 cut(s) | 632, 866, 1283 |
| NspI | RCATGY | 2 cut(s) | 939, 1284 |
| PceI | AGGCCT | 1 cut(s) | 586 |
| PciI | ACATGT | 1 cut(s) | 1280 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 879 |
| PfeI | GAWTC | 1 cut(s) | 234 |
| PfoI | TCCNGGA | 2 cut(s) | 108, 353 |
| PkrI | GCNGC | 4 cut(s) | 61, 835, 1201, 1318 |
| PleI | GAGTC | 2 cut(s) | 99, 344 |
| PmaCI | CACGTG | 1 cut(s) | 874 |
| PmlI | CACGTG | 1 cut(s) | 874 |
| PpsI | GAGTC | 2 cut(s) | 99, 344 |
| Ppu21I | YACGTR | 1 cut(s) | 874 |
| PpuMI | RGGWCCY | 1 cut(s) | 927 |
| PscI | ACATGT | 1 cut(s) | 1280 |
| Psp124BI | GAGCTC | 1 cut(s) | 223 |
| Psp5II | RGGWCCY | 1 cut(s) | 927 |
| Psp6I | CCWGG | 2 cut(s) | 353, 1377 |
| PspCI | CACGTG | 1 cut(s) | 874 |
| PspEI | GGTNACC | 1 cut(s) | 866 |
| PspGI | CCWGG | 2 cut(s) | 353, 1377 |
| PspN4I | GGNNCC | 2 cut(s) | 82, 141 |
| PspPI | GGNCC | 2 cut(s) | 139, 927 |
| PspPPI | RGGWCCY | 1 cut(s) | 927 |
| PsuI | RGATCY | 2 cut(s) | 268, 1006 |
| PvuII | CAGCTG | 1 cut(s) | 1231 |
| RsaI | GTAC | 4 cut(s) | 206, 465, 560, 810 |
| RsaNI | GTAC | 4 cut(s) | 205, 464, 559, 809 |
| SacI | GAGCTC | 1 cut(s) | 223 |
| SalI | GTCGAC | 1 cut(s) | 155 |
| SaqAI | TTAA | 5 cut(s) | 225, 953, 1037, 1053, 1083 |
| SatI | GCNGC | 4 cut(s) | 60, 834, 1200, 1317 |
| Sau3AI | GATC | 5 cut(s) | 268, 472, 642, 1006, 1071 |
| Sau96I | GGNCC | 2 cut(s) | 139, 927 |
| ScaI | AGTACT | 1 cut(s) | 810 |
| SchI | GAGTC | 2 cut(s) | 99, 344 |
| ScrFI | CCNGG | 6 cut(s) | 110, 355, 456, 856, 1152, 1379 |
| SduI | GDGCHC | 2 cut(s) | 223, 794 |
| SfaNI | GCATC | 3 cut(s) | 283, 673, 756 |
| SinI | GGWCC | 2 cut(s) | 139, 927 |
| SmlI | CTYRAG | 2 cut(s) | 398, 952 |
| SmoI | CTYRAG | 2 cut(s) | 398, 952 |
| Sse9I | AATT | 7 cut(s) | 288, 315, 720, 1066, 1122, 1249, 1383 |
| SseBI | AGGCCT | 1 cut(s) | 586 |
| SsiI | CCGC | 1 cut(s) | 242 |
| SspMI | CTAG | 6 cut(s) | 266, 368, 687, 801, 812, 1143 |
| SstI | GAGCTC | 1 cut(s) | 223 |
| StuI | AGGCCT | 1 cut(s) | 586 |
| StyD4I | CCNGG | 6 cut(s) | 108, 353, 454, 854, 1150, 1377 |
| TaaI | ACNGT | 2 cut(s) | 154, 1137 |
| TaiI | ACGT | 6 cut(s) | 639, 876, 1049, 1275, 1405, 1436 |
| TaqI | TCGA | 7 cut(s) | 29, 46, 156, 615, 626, 714, 882 |
| TasI | AATT | 7 cut(s) | 288, 315, 720, 1066, 1122, 1249, 1383 |
| TatI | WGTACW | 2 cut(s) | 204, 808 |
| TfiI | GAWTC | 1 cut(s) | 234 |
| Tru1I | TTAA | 5 cut(s) | 225, 953, 1037, 1053, 1083 |
| Tru9I | TTAA | 5 cut(s) | 225, 953, 1037, 1053, 1083 |
| TscAI | CASTG | 1 cut(s) | 708 |
| TseFI | GTSAC | 3 cut(s) | 632, 866, 1283 |
| TseI | GCWGC | 4 cut(s) | 59, 833, 1199, 1316 |
| Tsp45I | GTSAC | 3 cut(s) | 632, 866, 1283 |
| TspDTI | ATGAA | 8 cut(s) | 297, 412, 551, 567, 664, 743, 752, 1039 |
| TspRI | CASTG | 1 cut(s) | 708 |
| Vha464I | CTTAAG | 1 cut(s) | 952 |
| VpaK11BI | GGWCC | 2 cut(s) | 139, 927 |
| XbaI | TCTAGA | 2 cut(s) | 367, 1142 |
| XceI | RCATGY | 2 cut(s) | 939, 1284 |
| XmiI | GTMKAC | 2 cut(s) | 156, 394 |
| XspI | CTAG | 6 cut(s) | 266, 368, 687, 801, 812, 1143 |
| ZrmI | AGTACT | 1 cut(s) | 810 |