No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SWIM | PF04434 | 62 - 90 | 5e-08 | SWIM zinc finger |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 502 |
| Acc36I | ACCTGC | 1 cut(s) | 502 |
| AcsI | RAATTY | 1 cut(s) | 252 |
| AfaI | GTAC | 2 cut(s) | 164, 829 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 313, 377, 479, 894 |
| AflIII | ACRYGT | 2 cut(s) | 144, 272 |
| AjnI | CCWGG | 1 cut(s) | 472 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 661, 693 |
| AluBI | AGCT | 3 cut(s) | 627, 749, 782 |
| AluI | AGCT | 3 cut(s) | 627, 749, 782 |
| Alw21I | GWGCWC | 1 cut(s) | 142 |
| AoxI | GGCC | 2 cut(s) | 82, 446 |
| ApeKI | GCWGC | 3 cut(s) | 655, 847, 850 |
| ApoI | RAATTY | 1 cut(s) | 252 |
| AspA2I | CCTAGG | 1 cut(s) | 689 |
| AspS9I | GGNCC | 3 cut(s) | 69, 83, 686 |
| AsuHPI | GGTGA | 1 cut(s) | 629 |
| AvaII | GGWCC | 2 cut(s) | 69, 686 |
| AvrII | CCTAGG | 1 cut(s) | 689 |
| Bbv12I | GWGCWC | 1 cut(s) | 142 |
| BbvI | GCAGC | 3 cut(s) | 667, 859, 862 |
| BccI | CCATC | 2 cut(s) | 13, 60 |
| BciT130I | CCWGG | 1 cut(s) | 474 |
| BfaI | CTAG | 4 cut(s) | 303, 519, 690, 768 |
| BfuAI | ACCTGC | 1 cut(s) | 502 |
| BisI | GCNGC | 3 cut(s) | 656, 848, 851 |
| BlnI | CCTAGG | 1 cut(s) | 689 |
| BlsI | GCNGC | 3 cut(s) | 657, 849, 852 |
| Bme1390I | CCNGG | 1 cut(s) | 474 |
| Bme18I | GGWCC | 2 cut(s) | 69, 686 |
| BmgT120I | GGNCC | 3 cut(s) | 69, 83, 686 |
| BmiI | GGNNCC | 2 cut(s) | 300, 396 |
| BmrFI | CCNGG | 1 cut(s) | 474 |
| BmsI | GCATC | 3 cut(s) | 337, 493, 811 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 806, 838 |
| BpmI | CTGGAG | 3 cut(s) | 195, 399, 495 |
| BsaJI | CCNNGG | 1 cut(s) | 689 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 146, 176, 661, 691 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 313, 377, 479, 894 |
| Bse118I | RCCGGY | 1 cut(s) | 397 |
| Bse1I | ACTGG | 2 cut(s) | 178, 300 |
| BseBI | CCWGG | 1 cut(s) | 474 |
| BseDI | CCNNGG | 1 cut(s) | 689 |
| BseGI | GGATG | 2 cut(s) | 18, 24 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 313, 377, 479, 894 |
| BseMII | CTCAG | 1 cut(s) | 903 |
| BseNI | ACTGG | 2 cut(s) | 178, 300 |
| BseRI | GAGGAG | 1 cut(s) | 408 |
| BseXI | GCAGC | 3 cut(s) | 667, 859, 862 |
| BseYI | CCCAGC | 1 cut(s) | 749 |
| BsgI | GTGCAG | 1 cut(s) | 866 |
| BshFI | GGCC | 2 cut(s) | 84, 448 |
| BsiHKAI | GWGCWC | 1 cut(s) | 142 |
| BsiSI | CCGG | 1 cut(s) | 398 |
| BslFI | GGGAC | 1 cut(s) | 582 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 313, 377, 479, 894 |
| BsmFI | GGGAC | 1 cut(s) | 582 |
| BsnI | GGCC | 2 cut(s) | 84, 448 |
| Bsp1286I | GDGCHC | 1 cut(s) | 142 |
| Bsp1407I | TGTACA | 1 cut(s) | 827 |
| BspANI | GGCC | 2 cut(s) | 84, 448 |
| BspCNI | CTCAG | 1 cut(s) | 902 |
| BspHI | TCATGA | 1 cut(s) | 127 |
| BspLI | GGNNCC | 2 cut(s) | 300, 396 |
| BspMI | ACCTGC | 1 cut(s) | 502 |
| BsrFI | RCCGGY | 1 cut(s) | 397 |
| BsrGI | TGTACA | 1 cut(s) | 827 |
| BsrI | ACTGG | 2 cut(s) | 178, 300 |
| BssAI | RCCGGY | 1 cut(s) | 397 |
| BssECI | CCNNGG | 1 cut(s) | 689 |
| BssT1I | CCWWGG | 1 cut(s) | 689 |
| Bst2UI | CCWGG | 1 cut(s) | 474 |
| Bst6I | CTCTTC | 2 cut(s) | 452, 731 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 275, 494 |
| BstAUI | TGTACA | 1 cut(s) | 827 |
| BstC8I | GCNNGC | 6 cut(s) | 58, 198, 215, 508, 660, 901 |
| BstDEI | CTNAG | 3 cut(s) | 208, 630, 889 |
| BstF5I | GGATG | 2 cut(s) | 18, 24 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 275, 284, 494, 503, 633 |
| BstNI | CCWGG | 1 cut(s) | 474 |
| BstNSI | RCATGY | 7 cut(s) | 148, 184, 200, 217, 225, 231, 276 |
| BstSCI | CCNGG | 1 cut(s) | 472 |
| BstV1I | GCAGC | 3 cut(s) | 667, 859, 862 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 173 |
| BsuRI | GGCC | 2 cut(s) | 84, 448 |
| BtsCI | GGATG | 2 cut(s) | 18, 24 |
| BveI | ACCTGC | 1 cut(s) | 502 |
| Cac8I | GCNNGC | 6 cut(s) | 58, 198, 215, 508, 660, 901 |
| CciI | TCATGA | 1 cut(s) | 127 |
| Cfr10I | RCCGGY | 1 cut(s) | 397 |
| Cfr13I | GGNCC | 3 cut(s) | 69, 83, 686 |
| Csp6I | GTAC | 2 cut(s) | 163, 828 |
| CviJI | RGCY | 9 cut(s) | 41, 84, 306, 397, 448, 627, 749, 782, 853 |
| CviKI_1 | RGCY | 9 cut(s) | 41, 84, 306, 397, 448, 627, 749, 782, 853 |
| CviQI | GTAC | 2 cut(s) | 163, 828 |
| DdeI | CTNAG | 3 cut(s) | 208, 630, 889 |
| Eam1104I | CTCTTC | 2 cut(s) | 452, 731 |
| EarI | CTCTTC | 2 cut(s) | 452, 731 |
| Eco130I | CCWWGG | 1 cut(s) | 689 |
| Eco147I | AGGCCT | 1 cut(s) | 448 |
| Eco47I | GGWCC | 2 cut(s) | 69, 686 |
| EcoO109I | RGGNCCY | 1 cut(s) | 686 |
| EcoRI | GAATTC | 1 cut(s) | 252 |
| EcoRII | CCWGG | 1 cut(s) | 472 |
| EcoT14I | CCWWGG | 1 cut(s) | 689 |
| EcoT22I | ATGCAT | 1 cut(s) | 352 |
| ErhI | CCWWGG | 1 cut(s) | 689 |
| FaqI | GGGAC | 1 cut(s) | 582 |
| Fnu4HI | GCNGC | 3 cut(s) | 656, 848, 851 |
| FokI | GGATG | 2 cut(s) | 25, 31 |
| Fsp4HI | GCNGC | 3 cut(s) | 656, 848, 851 |
| FspBI | CTAG | 4 cut(s) | 303, 519, 690, 768 |
| GluI | GCNGC | 3 cut(s) | 656, 848, 851 |
| GsaI | CCCAGC | 1 cut(s) | 753 |
| GsuI | CTGGAG | 3 cut(s) | 195, 399, 495 |
| HaeIII | GGCC | 2 cut(s) | 84, 448 |
| HapII | CCGG | 1 cut(s) | 398 |
| HincII | GTYRAC | 2 cut(s) | 205, 765 |
| HindII | GTYRAC | 2 cut(s) | 205, 765 |
| HindIII | AAGCTT | 1 cut(s) | 780 |
| HinfI | GANTC | 3 cut(s) | 23, 462, 601 |
| HpaII | CCGG | 1 cut(s) | 398 |
| HphI | GGTGA | 1 cut(s) | 629 |
| Hpy166II | GTNNAC | 5 cut(s) | 205, 316, 403, 765, 860 |
| Hpy188I | TCNGA | 1 cut(s) | 892 |
| Hpy188III | TCNNGA | 3 cut(s) | 128, 344, 519 |
| Hpy8I | GTNNAC | 5 cut(s) | 205, 316, 403, 765, 860 |
| HpyAV | CCTTC | 3 cut(s) | 42, 559, 614 |
| HpyCH4IV | ACGT | 1 cut(s) | 884 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 275, 284, 494, 503, 633 |
| HpyF3I | CTNAG | 3 cut(s) | 208, 630, 889 |
| HpySE526I | ACGT | 1 cut(s) | 884 |
| LmnI | GCTCC | 4 cut(s) | 394, 421, 682, 871 |
| Lsp1109I | GCAGC | 3 cut(s) | 667, 859, 862 |
| LweI | GCATC | 3 cut(s) | 337, 493, 811 |
| MaeI | CTAG | 4 cut(s) | 303, 519, 690, 768 |
| MaeII | ACGT | 1 cut(s) | 884 |
| MaeIII | GTNAC | 2 cut(s) | 169, 327 |
| MboII | GAAGA | 5 cut(s) | 121, 469, 745, 748, 780 |
| MfeI | CAATTG | 1 cut(s) | 411 |
| MhlI | GDGCHC | 1 cut(s) | 142 |
| MluCI | AATT | 8 cut(s) | 90, 99, 242, 252, 319, 411, 708, 863 |
| Mph1103I | ATGCAT | 1 cut(s) | 352 |
| MseI | TTAA | 2 cut(s) | 245, 597 |
| MslI | CAYNNNNRTG | 1 cut(s) | 226 |
| MspI | CCGG | 1 cut(s) | 398 |
| MspR9I | CCNGG | 1 cut(s) | 474 |
| MunI | CAATTG | 1 cut(s) | 411 |
| MvaI | CCWGG | 1 cut(s) | 474 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 275, 284, 494, 503, 633 |
| NlaIV | GGNNCC | 2 cut(s) | 300, 396 |
| NmuCI | GTSAC | 1 cut(s) | 169 |
| NsiI | ATGCAT | 1 cut(s) | 352 |
| NspI | RCATGY | 7 cut(s) | 148, 184, 200, 217, 225, 231, 276 |
| PaeI | GCATGC | 2 cut(s) | 200, 217 |
| PagI | TCATGA | 1 cut(s) | 127 |
| PaqCI | CACCTGC | 1 cut(s) | 502 |
| PceI | AGGCCT | 1 cut(s) | 448 |
| PciI | ACATGT | 2 cut(s) | 144, 272 |
| PfeI | GAWTC | 3 cut(s) | 23, 462, 601 |
| PkrI | GCNGC | 3 cut(s) | 657, 849, 852 |
| PpuMI | RGGWCCY | 1 cut(s) | 686 |
| PscI | ACATGT | 2 cut(s) | 144, 272 |
| Psp5II | RGGWCCY | 1 cut(s) | 686 |
| Psp6I | CCWGG | 1 cut(s) | 472 |
| PspFI | CCCAGC | 1 cut(s) | 749 |
| PspGI | CCWGG | 1 cut(s) | 472 |
| PspN4I | GGNNCC | 2 cut(s) | 300, 396 |
| PspPI | GGNCC | 3 cut(s) | 69, 83, 686 |
| PspPPI | RGGWCCY | 1 cut(s) | 686 |
| RsaI | GTAC | 2 cut(s) | 164, 829 |
| RsaNI | GTAC | 2 cut(s) | 163, 828 |
| RseI | CAYNNNNRTG | 1 cut(s) | 226 |
| SaqAI | TTAA | 2 cut(s) | 245, 597 |
| SatI | GCNGC | 3 cut(s) | 656, 848, 851 |
| Sau96I | GGNCC | 3 cut(s) | 69, 83, 686 |
| ScrFI | CCNGG | 1 cut(s) | 474 |
| SduI | GDGCHC | 1 cut(s) | 142 |
| SfaNI | GCATC | 3 cut(s) | 337, 493, 811 |
| SinI | GGWCC | 2 cut(s) | 69, 686 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 226 |
| SphI | GCATGC | 2 cut(s) | 200, 217 |
| Sse9I | AATT | 8 cut(s) | 90, 99, 242, 252, 319, 411, 708, 863 |
| SseBI | AGGCCT | 1 cut(s) | 448 |
| SspMI | CTAG | 4 cut(s) | 303, 519, 690, 768 |
| StuI | AGGCCT | 1 cut(s) | 448 |
| StyD4I | CCNGG | 1 cut(s) | 472 |
| StyI | CCWWGG | 1 cut(s) | 689 |
| TaiI | ACGT | 1 cut(s) | 887 |
| TaqI | TCGA | 2 cut(s) | 88, 805 |
| TasI | AATT | 8 cut(s) | 90, 99, 242, 252, 319, 411, 708, 863 |
| TatI | WGTACW | 1 cut(s) | 827 |
| TfiI | GAWTC | 3 cut(s) | 23, 462, 601 |
| Tru1I | TTAA | 2 cut(s) | 245, 597 |
| Tru9I | TTAA | 2 cut(s) | 245, 597 |
| TseFI | GTSAC | 1 cut(s) | 169 |
| TseI | GCWGC | 3 cut(s) | 655, 847, 850 |
| Tsp45I | GTSAC | 1 cut(s) | 169 |
| TspDTI | ATGAA | 3 cut(s) | 144, 470, 774 |
| VpaK11BI | GGWCC | 2 cut(s) | 69, 686 |
| XapI | RAATTY | 1 cut(s) | 252 |
| XbaI | TCTAGA | 1 cut(s) | 518 |
| XceI | RCATGY | 7 cut(s) | 148, 184, 200, 217, 225, 231, 276 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 34 |
| XmaJI | CCTAGG | 1 cut(s) | 689 |
| XspI | CTAG | 4 cut(s) | 303, 519, 690, 768 |
| Zsp2I | ATGCAT | 1 cut(s) | 352 |