No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| BRR2_plug | PF21188 | 122 - 172 | 2.5e-07 | Pre-mRNA-splicing helicase BRR2 plug domain |
| Helicase_PWI | PF18149 | 237 - 344 | 9.3e-33 | N-terminal helicase PWI domain |
| DEAD | PF00270 | 469 - 646 | 6.6e-32 | DEAD/DEAH box helicase |
| ResIII | PF04851 | 473 - 641 | 1.1e-11 | Type III restriction enzyme, res subunit |
| Helicase_C | PF00271 | 751 - 845 | 7.4e-10 | Helicase conserved C-terminal domain |
| WHD_SNRNP200 | PF23445 | 876 - 950 | 4.5e-24 | Winged Helix-turn-helix domain |
| Sec63 | PF02889 | 968 - 1013 | 2.1e-13 | Sec63 Brl domain |
| zf-RVT | PF13966 | 1245 - 1327 | 4.8e-23 | zinc-binding in reverse transcriptase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 882, 1566, 3747, 4083 |
| AatII | GACGTC | 1 cut(s) | 3763 |
| AccB1I | GGYRCC | 1 cut(s) | 1225 |
| AccI | GTMKAC | 2 cut(s) | 1575, 3710 |
| AccII | CGCG | 4 cut(s) | 443, 3175, 3817, 4135 |
| AccIII | TCCGGA | 2 cut(s) | 1246, 3191 |
| AclWI | GGATC | 5 cut(s) | 1032, 2361, 2821, 3515, 3528 |
| AcoI | YGGCCR | 2 cut(s) | 283, 3419 |
| AcsI | RAATTY | 8 cut(s) | 478, 487, 886, 1806, 2238, 3534, 3654, 4122 |
| AcuI | CTGAAG | 6 cut(s) | 282, 728, 828, 978, 1626, 3500 |
| AcvI | CACGTG | 1 cut(s) | 107 |
| AcyI | GRCGYC | 4 cut(s) | 295, 1647, 3760, 4245 |
| AdeI | CACNNNGTG | 1 cut(s) | 3020 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 17, 645, 2344, 2850, 2984 |
| AflIII | ACRYGT | 1 cut(s) | 1954 |
| AjiI | CACGTC | 1 cut(s) | 1132 |
| AjnI | CCWGG | 7 cut(s) | 78, 271, 2451, 2895, 3279, 3421, 4228 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2661, 2693 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3997, 4029 |
| Alw21I | GWGCWC | 4 cut(s) | 941, 1468, 2136, 3247 |
| Alw26I | GTCTC | 8 cut(s) | 356, 1188, 1697, 2019, 2392, 3197, 3674, 3771 |
| Alw44I | GTGCAC | 2 cut(s) | 937, 2132 |
| AlwI | GGATC | 5 cut(s) | 1032, 2361, 2821, 3515, 3528 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1681, 3689, 3719 |
| Ama87I | CYCGRG | 1 cut(s) | 2137 |
| Aor13HI | TCCGGA | 2 cut(s) | 1246, 3191 |
| AoxI | GGCC | 7 cut(s) | 66, 283, 1831, 1972, 2000, 3137, 3419 |
| ApaLI | GTGCAC | 2 cut(s) | 937, 2132 |
| ApeKI | GCWGC | 5 cut(s) | 7, 1189, 1430, 2837, 4097 |
| ApoI | RAATTY | 8 cut(s) | 478, 487, 886, 1806, 2238, 3534, 3654, 4122 |
| AseI | ATTAAT | 1 cut(s) | 846 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 813, 929, 1290, 2241, 2673, 3326, 3655 |
| AspLEI | GCGC | 5 cut(s) | 37, 443, 3175, 3819, 4135 |
| AspS9I | GGNCC | 5 cut(s) | 66, 1832, 1972, 2448, 3189 |
| AsuC2I | CCSGG | 2 cut(s) | 43, 640 |
| AsuHPI | GGTGA | 8 cut(s) | 1169, 1666, 1682, 1711, 2104, 2779, 3362, 3442 |
| AsuNHI | GCTAGC | 1 cut(s) | 2921 |
| AvaI | CYCGRG | 1 cut(s) | 2137 |
| AvaII | GGWCC | 2 cut(s) | 2448, 3189 |
| BaeGI | GKGCMC | 3 cut(s) | 941, 2136, 2577 |
| BalI | TGGCCA | 1 cut(s) | 3421 |
| BamHI | GGATCC | 1 cut(s) | 3520 |
| BanI | GGYRCC | 1 cut(s) | 1225 |
| BanII | GRGCYC | 1 cut(s) | 1372 |
| BauI | CACGAG | 4 cut(s) | 116, 951, 1781, 2163 |
| BbrPI | CACGTG | 1 cut(s) | 107 |
| BbsI | GAAGAC | 4 cut(s) | 199, 576, 2226, 2536 |
| Bbv12I | GWGCWC | 4 cut(s) | 941, 1468, 2136, 3247 |
| BbvCI | CCTCAGC | 1 cut(s) | 4074 |
| BbvI | GCAGC | 5 cut(s) | 19, 1176, 1417, 2824, 4109 |
| BceAI | ACGGC | 1 cut(s) | 308 |
| BciT130I | CCWGG | 7 cut(s) | 80, 273, 2453, 2897, 3281, 3423, 4230 |
| BclI | TGATCA | 1 cut(s) | 2865 |
| BcnI | CCSGG | 2 cut(s) | 43, 640 |
| BcoDI | GTCTC | 8 cut(s) | 356, 1188, 1697, 2019, 2392, 3197, 3674, 3771 |
| BfmI | CTRYAG | 2 cut(s) | 2100, 3711 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1043 |
| BglII | AGATCT | 1 cut(s) | 1262 |
| Bme1390I | CCNGG | 9 cut(s) | 43, 80, 273, 640, 2453, 2897, 3281, 3423, 4230 |
| Bme18I | GGWCC | 2 cut(s) | 2448, 3189 |
| BmeT110I | CYCGRG | 1 cut(s) | 2137 |
| BmgBI | CACGTC | 1 cut(s) | 1132 |
| BmgT120I | GGNCC | 5 cut(s) | 66, 1832, 1972, 2448, 3189 |
| BmiI | GGNNCC | 6 cut(s) | 1227, 2449, 2450, 3522, 4006, 4219 |
| BmrFI | CCNGG | 9 cut(s) | 43, 80, 273, 640, 2453, 2897, 3281, 3423, 4230 |
| BmrI | ACTGGG | 3 cut(s) | 1482, 2580, 3790 |
| BmsI | GCATC | 5 cut(s) | 241, 721, 772, 1022, 2452 |
| BmtI | GCTAGC | 1 cut(s) | 2925 |
| BmuI | ACTGGG | 3 cut(s) | 1482, 2580, 3790 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2910 |
| BpiI | GAAGAC | 4 cut(s) | 199, 576, 2226, 2536 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1529, 1561 |
| BpmI | CTGGAG | 1 cut(s) | 3741 |
| Bpu10I | CCTNAGC | 1 cut(s) | 4074 |
| BpuEI | CTTGAG | 3 cut(s) | 58, 816, 3219 |
| BpuMI | CCSGG | 2 cut(s) | 43, 640 |
| Bsa29I | ATCGAT | 3 cut(s) | 1016, 3004, 4159 |
| BsaAI | YACGTR | 2 cut(s) | 107, 1955 |
| BsaHI | GRCGYC | 4 cut(s) | 295, 1647, 3760, 4245 |
| BsaI | GGTCTC | 1 cut(s) | 2392 |
| BsaJI | CCNNGG | 5 cut(s) | 90, 255, 2048, 2200, 2451 |
| BsaWI | WCCGGW | 3 cut(s) | 1246, 3191, 3892 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 128, 158, 980, 1010 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 17, 645, 2344, 2850, 2984 |
| Bse118I | RCCGGY | 3 cut(s) | 125, 196, 2422 |
| Bse1I | ACTGG | 6 cut(s) | 1180, 1477, 2575, 2717, 3557, 3785 |
| Bse3DI | GCAATG | 2 cut(s) | 1311, 2916 |
| BseAI | TCCGGA | 2 cut(s) | 1246, 3191 |
| BseBI | CCWGG | 7 cut(s) | 80, 273, 2453, 2897, 3281, 3423, 4230 |
| BseCI | ATCGAT | 3 cut(s) | 1016, 3004, 4159 |
| BseDI | CCNNGG | 5 cut(s) | 90, 255, 2048, 2200, 2451 |
| BseGI | GGATG | 7 cut(s) | 454, 616, 787, 973, 1255, 1546, 3989 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 17, 645, 2344, 2850, 2984 |
| BseMI | GCAATG | 2 cut(s) | 1311, 2916 |
| BseMII | CTCAG | 9 cut(s) | 1199, 1409, 1719, 2549, 3031, 3606, 4010, 4088, 4159 |
| BseNI | ACTGG | 6 cut(s) | 1180, 1477, 2575, 2717, 3557, 3785 |
| BseRI | GAGGAG | 4 cut(s) | 593, 1001, 1004, 2822 |
| BseSI | GKGCMC | 3 cut(s) | 941, 2136, 2577 |
| BseXI | GCAGC | 5 cut(s) | 19, 1176, 1417, 2824, 4109 |
| BseYI | CCCAGC | 2 cut(s) | 2318, 3068 |
| BsgI | GTGCAG | 5 cut(s) | 623, 740, 887, 2166, 2544 |
| Bsh1236I | CGCG | 4 cut(s) | 443, 3175, 3817, 4135 |
| BshFI | GGCC | 7 cut(s) | 68, 285, 1833, 1974, 2002, 3139, 3421 |
| BshNI | GGYRCC | 1 cut(s) | 1225 |
| BshVI | ATCGAT | 3 cut(s) | 1016, 3004, 4159 |
| BsiHKAI | GWGCWC | 4 cut(s) | 941, 1468, 2136, 3247 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2137 |
| BslFI | GGGAC | 6 cut(s) | 124, 533, 1142, 1991, 2461, 2959 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 17, 645, 2344, 2850, 2984 |
| BsmAI | GTCTC | 8 cut(s) | 356, 1188, 1697, 2019, 2392, 3197, 3674, 3771 |
| BsmBI | CGTCTC | 1 cut(s) | 356 |
| BsmFI | GGGAC | 6 cut(s) | 124, 533, 1142, 1991, 2461, 2959 |
| BsmI | GAATGC | 3 cut(s) | 1379, 2668, 3799 |
| BsnI | GGCC | 7 cut(s) | 68, 285, 1833, 1974, 2002, 3139, 3421 |
| Bso31I | GGTCTC | 1 cut(s) | 2392 |
| BsoBI | CYCGRG | 1 cut(s) | 2137 |
| Bsp1286I | GDGCHC | 6 cut(s) | 941, 1372, 1468, 2136, 2577, 3247 |
| Bsp13I | TCCGGA | 2 cut(s) | 1246, 3191 |
| Bsp1407I | TGTACA | 1 cut(s) | 3645 |
| Bsp19I | CCATGG | 1 cut(s) | 2048 |
| BspANI | GGCC | 7 cut(s) | 68, 285, 1833, 1974, 2002, 3139, 3421 |
| BspCNI | CTCAG | 9 cut(s) | 1198, 1408, 1720, 2548, 3030, 3605, 4009, 4087, 4158 |
| BspDI | ATCGAT | 3 cut(s) | 1016, 3004, 4159 |
| BspEI | TCCGGA | 2 cut(s) | 1246, 3191 |
| BspFNI | CGCG | 4 cut(s) | 443, 3175, 3817, 4135 |
| BspLI | GGNNCC | 6 cut(s) | 1227, 2449, 2450, 3522, 4006, 4219 |
| BspOI | GCTAGC | 1 cut(s) | 2925 |
| BspPI | GGATC | 5 cut(s) | 1032, 2361, 2821, 3515, 3528 |
| BspQI | GCTCTTC | 2 cut(s) | 1103, 3447 |
| BspT107I | GGYRCC | 1 cut(s) | 1225 |
| BspTNI | GGTCTC | 1 cut(s) | 2392 |
| BsrDI | GCAATG | 2 cut(s) | 1311, 2916 |
| BsrFI | RCCGGY | 3 cut(s) | 125, 196, 2422 |
| BsrGI | TGTACA | 1 cut(s) | 3645 |
| BsrI | ACTGG | 6 cut(s) | 1180, 1477, 2575, 2717, 3557, 3785 |
| BssAI | RCCGGY | 3 cut(s) | 125, 196, 2422 |
| BssECI | CCNNGG | 5 cut(s) | 90, 255, 2048, 2200, 2451 |
| BssNAI | GTATAC | 1 cut(s) | 1576 |
| BssNI | GRCGYC | 4 cut(s) | 295, 1647, 3760, 4245 |
| BssSI | CACGAG | 4 cut(s) | 116, 951, 1781, 2163 |
| BssT1I | CCWWGG | 2 cut(s) | 2048, 2200 |
| Bst1107I | GTATAC | 1 cut(s) | 1576 |
| Bst2BI | CACGAG | 4 cut(s) | 116, 951, 1781, 2163 |
| Bst2UI | CCWGG | 7 cut(s) | 80, 273, 2453, 2897, 3281, 3423, 4230 |
| Bst6I | CTCTTC | 9 cut(s) | 227, 324, 555, 804, 1086, 1103, 1695, 3018, 3447 |
| BstACI | GRCGYC | 4 cut(s) | 295, 1647, 3760, 4245 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 316, 2402 |
| BstAUI | TGTACA | 1 cut(s) | 3645 |
| BstBAI | YACGTR | 2 cut(s) | 107, 1955 |
| BstDSI | CCRYGG | 2 cut(s) | 90, 2048 |
| BstEII | GGTNACC | 1 cut(s) | 1670 |
| BstF5I | GGATG | 7 cut(s) | 454, 616, 787, 973, 1255, 1546, 3989 |
| BstFNI | CGCG | 4 cut(s) | 443, 3175, 3817, 4135 |
| BstHHI | GCGC | 5 cut(s) | 37, 443, 3175, 3819, 4135 |
| BstMAI | GTCTC | 8 cut(s) | 356, 1188, 1697, 2019, 2392, 3197, 3674, 3771 |
| BstNI | CCWGG | 7 cut(s) | 80, 273, 2453, 2897, 3281, 3423, 4230 |
| BstNSI | RCATGY | 4 cut(s) | 115, 1004, 1037, 2375 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2910 |
| BstPI | GGTNACC | 1 cut(s) | 1670 |
| BstSCI | CCNGG | 9 cut(s) | 41, 78, 271, 638, 2451, 2895, 3279, 3421, 4228 |
| BstSFI | CTRYAG | 2 cut(s) | 2100, 3711 |
| BstSLI | GKGCMC | 3 cut(s) | 941, 2136, 2577 |
| BstUI | CGCG | 4 cut(s) | 443, 3175, 3817, 4135 |
| BstV1I | GCAGC | 5 cut(s) | 19, 1176, 1417, 2824, 4109 |
| BstV2I | GAAGAC | 4 cut(s) | 199, 576, 2226, 2536 |
| BstX2I | RGATCY | 3 cut(s) | 1262, 2353, 3520 |
| BstYI | RGATCY | 3 cut(s) | 1262, 2353, 3520 |
| BstZ17I | GTATAC | 1 cut(s) | 1576 |
| Bsu15I | ATCGAT | 3 cut(s) | 1016, 3004, 4159 |
| BsuRI | GGCC | 7 cut(s) | 68, 285, 1833, 1974, 2002, 3139, 3421 |
| BsuTUI | ATCGAT | 3 cut(s) | 1016, 3004, 4159 |
| BtgI | CCRYGG | 2 cut(s) | 90, 2048 |
| BtrI | CACGTC | 1 cut(s) | 1132 |
| BtsCI | GGATG | 7 cut(s) | 454, 616, 787, 973, 1255, 1546, 3989 |
| BtsI | GCAGTG | 2 cut(s) | 797, 1120 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1681, 3689, 3719 |
| CfoI | GCGC | 5 cut(s) | 37, 443, 3175, 3819, 4135 |
| Cfr10I | RCCGGY | 3 cut(s) | 125, 196, 2422 |
| Cfr13I | GGNCC | 5 cut(s) | 66, 1832, 1972, 2448, 3189 |
| ClaI | ATCGAT | 3 cut(s) | 1016, 3004, 4159 |
| CseI | GACGC | 4 cut(s) | 284, 373, 1636, 4234 |
| DraIII | CACNNNGTG | 1 cut(s) | 3020 |
| EaeI | YGGCCR | 2 cut(s) | 283, 3419 |
| Eam1104I | CTCTTC | 9 cut(s) | 227, 324, 555, 804, 1086, 1103, 1695, 3018, 3447 |
| EarI | CTCTTC | 9 cut(s) | 227, 324, 555, 804, 1086, 1103, 1695, 3018, 3447 |
| EciI | GGCGGA | 2 cut(s) | 215, 461 |
| Eco130I | CCWWGG | 2 cut(s) | 2048, 2200 |
| Eco147I | AGGCCT | 1 cut(s) | 2002 |
| Eco24I | GRGCYC | 1 cut(s) | 1372 |
| Eco31I | GGTCTC | 1 cut(s) | 2392 |
| Eco32I | GATATC | 1 cut(s) | 1741 |
| Eco47I | GGWCC | 2 cut(s) | 2448, 3189 |
| Eco57I | CTGAAG | 6 cut(s) | 282, 728, 828, 978, 1626, 3500 |
| Eco72I | CACGTG | 1 cut(s) | 107 |
| Eco88I | CYCGRG | 1 cut(s) | 2137 |
| Eco91I | GGTNACC | 1 cut(s) | 1670 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1832, 1972, 2448 |
| EcoO65I | GGTNACC | 1 cut(s) | 1670 |
| EcoRI | GAATTC | 1 cut(s) | 487 |
| EcoRII | CCWGG | 7 cut(s) | 78, 271, 2451, 2895, 3279, 3421, 4228 |
| EcoRV | GATATC | 1 cut(s) | 1741 |
| EcoT14I | CCWWGG | 2 cut(s) | 2048, 2200 |
| EcoT38I | GRGCYC | 1 cut(s) | 1372 |
| ErhI | CCWWGG | 2 cut(s) | 2048, 2200 |
| Esp3I | CGTCTC | 1 cut(s) | 356 |
| FaqI | GGGAC | 6 cut(s) | 124, 533, 1142, 1991, 2461, 2959 |
| FauI | CCCGC | 2 cut(s) | 3254, 3878 |
| FauNDI | CATATG | 2 cut(s) | 2296, 2548 |
| FbaI | TGATCA | 1 cut(s) | 2865 |
| FblI | GTMKAC | 2 cut(s) | 1575, 3710 |
| FokI | GGATG | 7 cut(s) | 461, 623, 794, 980, 1262, 1553, 3996 |
| FriOI | GRGCYC | 1 cut(s) | 1372 |
| GlaI | GCGC | 5 cut(s) | 36, 442, 3174, 3818, 4134 |
| GsaI | CCCAGC | 2 cut(s) | 2322, 3072 |
| GsuI | CTGGAG | 1 cut(s) | 3741 |
| HaeIII | GGCC | 7 cut(s) | 68, 285, 1833, 1974, 2002, 3139, 3421 |
| HgaI | GACGC | 4 cut(s) | 284, 373, 1636, 4234 |
| HhaI | GCGC | 5 cut(s) | 37, 443, 3175, 3819, 4135 |
| Hin1I | GRCGYC | 4 cut(s) | 295, 1647, 3760, 4245 |
| Hin6I | GCGC | 5 cut(s) | 35, 441, 3173, 3817, 4133 |
| HinP1I | GCGC | 5 cut(s) | 35, 441, 3173, 3817, 4133 |
| HindIII | AAGCTT | 2 cut(s) | 762, 2703 |
| HphI | GGTGA | 8 cut(s) | 1169, 1666, 1682, 1711, 2104, 2779, 3362, 3442 |
| Hpy166II | GTNNAC | 7 cut(s) | 278, 939, 1418, 1576, 2134, 2724, 3711 |
| Hpy8I | GTNNAC | 7 cut(s) | 278, 939, 1418, 1576, 2134, 2724, 3711 |
| Hpy99I | CGWCG | 3 cut(s) | 215, 232, 300 |
| HpyAV | CCTTC | 9 cut(s) | 235, 329, 745, 953, 1270, 1520, 2549, 3814, 4123 |
| HpyCH4IV | ACGT | 6 cut(s) | 106, 1131, 1578, 1954, 3036, 3760 |
| HpySE526I | ACGT | 6 cut(s) | 106, 1131, 1578, 1954, 3036, 3760 |
| Hsp92I | GRCGYC | 4 cut(s) | 295, 1647, 3760, 4245 |
| HspAI | GCGC | 5 cut(s) | 35, 441, 3173, 3817, 4133 |
| KflI | GGGWCCC | 1 cut(s) | 2448 |
| Kpn2I | TCCGGA | 2 cut(s) | 1246, 3191 |
| KroI | GCCGGC | 1 cut(s) | 2422 |
| KroNI | GCCGGC | 1 cut(s) | 2424 |
| Ksp22I | TGATCA | 1 cut(s) | 2865 |
| LguI | GCTCTTC | 2 cut(s) | 1103, 3447 |
| LmnI | GCTCC | 8 cut(s) | 45, 244, 307, 1471, 1588, 1660, 2474, 3250 |
| Lsp1109I | GCAGC | 5 cut(s) | 19, 1176, 1417, 2824, 4109 |
| LweI | GCATC | 5 cut(s) | 241, 721, 772, 1022, 2452 |
| MaeII | ACGT | 6 cut(s) | 106, 1131, 1578, 1954, 3036, 3760 |
| MfeI | CAATTG | 3 cut(s) | 2063, 2657, 3457 |
| MflI | RGATCY | 3 cut(s) | 1262, 2353, 3520 |
| MhlI | GDGCHC | 6 cut(s) | 941, 1372, 1468, 2136, 2577, 3247 |
| MlsI | TGGCCA | 1 cut(s) | 3421 |
| MluNI | TGGCCA | 1 cut(s) | 3421 |
| MmeI | TCCRAC | 5 cut(s) | 278, 2008, 2697, 3446, 4014 |
| Mox20I | TGGCCA | 1 cut(s) | 3421 |
| MroI | TCCGGA | 2 cut(s) | 1246, 3191 |
| MroNI | GCCGGC | 1 cut(s) | 2422 |
| MroXI | GAANNNNTTC | 7 cut(s) | 813, 929, 1290, 2241, 2673, 3326, 3655 |
| MscI | TGGCCA | 1 cut(s) | 3421 |
| MseI | TTAA | 9 cut(s) | 303, 714, 846, 900, 1527, 1551, 3030, 3291, 4239 |
| Msp20I | TGGCCA | 1 cut(s) | 3421 |
| MspA1I | CMGCKG | 3 cut(s) | 1189, 2344, 4100 |
| MspR9I | CCNGG | 9 cut(s) | 43, 80, 273, 640, 2453, 2897, 3281, 3423, 4230 |
| MunI | CAATTG | 3 cut(s) | 2063, 2657, 3457 |
| Mva1269I | GAATGC | 3 cut(s) | 1379, 2668, 3799 |
| MvaI | CCWGG | 7 cut(s) | 80, 273, 2453, 2897, 3281, 3423, 4230 |
| MvnI | CGCG | 4 cut(s) | 443, 3175, 3817, 4135 |
| NaeI | GCCGGC | 1 cut(s) | 2424 |
| NciI | CCSGG | 2 cut(s) | 43, 640 |
| NcoI | CCATGG | 1 cut(s) | 2048 |
| NdeI | CATATG | 2 cut(s) | 2296, 2548 |
| NgoMIV | GCCGGC | 1 cut(s) | 2422 |
| NheI | GCTAGC | 1 cut(s) | 2921 |
| NlaIV | GGNNCC | 6 cut(s) | 1227, 2449, 2450, 3522, 4006, 4219 |
| NmeAIII | GCCGAG | 3 cut(s) | 280, 292, 450 |
| NspI | RCATGY | 4 cut(s) | 115, 1004, 1037, 2375 |
| PaeI | GCATGC | 1 cut(s) | 1037 |
| PaeR7I | CTCGAG | 1 cut(s) | 2137 |
| PceI | AGGCCT | 1 cut(s) | 2002 |
| PciSI | GCTCTTC | 2 cut(s) | 1103, 3447 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 371, 2170 |
| PctI | GAATGC | 3 cut(s) | 1379, 2668, 3799 |
| PdiI | GCCGGC | 1 cut(s) | 2424 |
| PdmI | GAANNNNTTC | 7 cut(s) | 813, 929, 1290, 2241, 2673, 3326, 3655 |
| PmaCI | CACGTG | 1 cut(s) | 107 |
| PmlI | CACGTG | 1 cut(s) | 107 |
| Ppu21I | YACGTR | 2 cut(s) | 107, 1955 |
| PpuMI | RGGWCCY | 1 cut(s) | 2448 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2910 |
| PshBI | ATTAAT | 1 cut(s) | 846 |
| PsiI | TTATAA | 4 cut(s) | 882, 1566, 3747, 4083 |
| Psp5II | RGGWCCY | 1 cut(s) | 2448 |
| Psp6I | CCWGG | 7 cut(s) | 78, 271, 2451, 2895, 3279, 3421, 4228 |
| PspCI | CACGTG | 1 cut(s) | 107 |
| PspEI | GGTNACC | 1 cut(s) | 1670 |
| PspFI | CCCAGC | 2 cut(s) | 2318, 3068 |
| PspGI | CCWGG | 7 cut(s) | 78, 271, 2451, 2895, 3279, 3421, 4228 |
| PspN4I | GGNNCC | 6 cut(s) | 1227, 2449, 2450, 3522, 4006, 4219 |
| PspPI | GGNCC | 5 cut(s) | 66, 1832, 1972, 2448, 3189 |
| PspPPI | RGGWCCY | 1 cut(s) | 2448 |
| PspXI | VCTCGAGB | 1 cut(s) | 2137 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1681, 3689, 3719 |
| PsuI | RGATCY | 3 cut(s) | 1262, 2353, 3520 |
| PvuII | CAGCTG | 3 cut(s) | 1189, 2344, 4100 |
| SapI | GCTCTTC | 2 cut(s) | 1103, 3447 |
| SaqAI | TTAA | 9 cut(s) | 303, 714, 846, 900, 1527, 1551, 3030, 3291, 4239 |
| Sau96I | GGNCC | 5 cut(s) | 66, 1832, 1972, 2448, 3189 |
| ScrFI | CCNGG | 9 cut(s) | 43, 80, 273, 640, 2453, 2897, 3281, 3423, 4230 |
| SduI | GDGCHC | 6 cut(s) | 941, 1372, 1468, 2136, 2577, 3247 |
| SfaNI | GCATC | 5 cut(s) | 241, 721, 772, 1022, 2452 |
| SfcI | CTRYAG | 2 cut(s) | 2100, 3711 |
| Sfr274I | CTCGAG | 1 cut(s) | 2137 |
| SinI | GGWCC | 2 cut(s) | 2448, 3189 |
| SlaI | CTCGAG | 1 cut(s) | 2137 |
| SmlI | CTYRAG | 4 cut(s) | 73, 831, 2137, 3234 |
| SmoI | CTYRAG | 4 cut(s) | 73, 831, 2137, 3234 |
| SphI | GCATGC | 1 cut(s) | 1037 |
| SseBI | AGGCCT | 1 cut(s) | 2002 |
| SspI | AATATT | 1 cut(s) | 3199 |
| StuI | AGGCCT | 1 cut(s) | 2002 |
| StyD4I | CCNGG | 9 cut(s) | 41, 78, 271, 638, 2451, 2895, 3279, 3421, 4228 |
| StyI | CCWWGG | 2 cut(s) | 2048, 2200 |
| TaiI | ACGT | 6 cut(s) | 109, 1134, 1581, 1957, 3039, 3763 |
| TatI | WGTACW | 2 cut(s) | 2721, 3645 |
| TauI | GCSGC | 5 cut(s) | 24, 374, 424, 446, 3302 |
| Tru1I | TTAA | 9 cut(s) | 303, 714, 846, 900, 1527, 1551, 3030, 3291, 4239 |
| Tru9I | TTAA | 9 cut(s) | 303, 714, 846, 900, 1527, 1551, 3030, 3291, 4239 |
| TseI | GCWGC | 5 cut(s) | 7, 1189, 1430, 2837, 4097 |
| TspGWI | ACGGA | 2 cut(s) | 107, 3419 |
| VneI | GTGCAC | 2 cut(s) | 937, 2132 |
| VpaK11BI | GGWCC | 2 cut(s) | 2448, 3189 |
| VspI | ATTAAT | 1 cut(s) | 846 |
| XapI | RAATTY | 8 cut(s) | 478, 487, 886, 1806, 2238, 3534, 3654, 4122 |
| XbaI | TCTAGA | 1 cut(s) | 98 |
| XceI | RCATGY | 4 cut(s) | 115, 1004, 1037, 2375 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 76 |
| XhoI | CTCGAG | 1 cut(s) | 2137 |
| XmiI | GTMKAC | 2 cut(s) | 1575, 3710 |
| XmnI | GAANNNNTTC | 7 cut(s) | 813, 929, 1290, 2241, 2673, 3326, 3655 |
| ZraI | GACGTC | 1 cut(s) | 3761 |