TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 131 |
| AccI | GTMKAC | 1 cut(s) | 75 |
| AccIII | TCCGGA | 1 cut(s) | 353 |
| AciI | CCGC | 1 cut(s) | 212 |
| AclWI | GGATC | 1 cut(s) | 364 |
| AfaI | GTAC | 5 cut(s) | 41, 145, 223, 240, 266 |
| AflIII | ACRYGT | 1 cut(s) | 410 |
| AgsI | TTSAA | 2 cut(s) | 127, 377 |
| AluBI | AGCT | 4 cut(s) | 297, 329, 382, 433 |
| AluI | AGCT | 4 cut(s) | 297, 329, 382, 433 |
| Alw21I | GWGCWC | 2 cut(s) | 299, 384 |
| Alw26I | GTCTC | 1 cut(s) | 440 |
| AlwI | GGATC | 1 cut(s) | 364 |
| Ama87I | CYCGRG | 1 cut(s) | 298 |
| Aor13HI | TCCGGA | 1 cut(s) | 353 |
| AspS9I | GGNCC | 1 cut(s) | 115 |
| AsuHPI | GGTGA | 2 cut(s) | 299, 314 |
| AvaI | CYCGRG | 1 cut(s) | 298 |
| AvaII | GGWCC | 1 cut(s) | 115 |
| BanII | GRGCYC | 2 cut(s) | 299, 384 |
| Bbv12I | GWGCWC | 2 cut(s) | 299, 384 |
| BcoDI | GTCTC | 1 cut(s) | 440 |
| BfaI | CTAG | 2 cut(s) | 104, 147 |
| BfuAI | ACCTGC | 1 cut(s) | 131 |
| Bme18I | GGWCC | 1 cut(s) | 115 |
| BmeT110I | CYCGRG | 1 cut(s) | 298 |
| BmgT120I | GGNCC | 1 cut(s) | 115 |
| BmiI | GGNNCC | 1 cut(s) | 426 |
| BmsI | GCATC | 2 cut(s) | 175, 199 |
| BpmI | CTGGAG | 1 cut(s) | 384 |
| BsaJI | CCNNGG | 2 cut(s) | 118, 458 |
| BsaWI | WCCGGW | 1 cut(s) | 353 |
| Bse1I | ACTGG | 1 cut(s) | 367 |
| BseAI | TCCGGA | 1 cut(s) | 353 |
| BseDI | CCNNGG | 2 cut(s) | 118, 458 |
| BseGI | GGATG | 2 cut(s) | 93, 220 |
| BseNI | ACTGG | 1 cut(s) | 367 |
| BsiHKAI | GWGCWC | 2 cut(s) | 299, 384 |
| BsiHKCI | CYCGRG | 1 cut(s) | 298 |
| BsiSI | CCGG | 1 cut(s) | 354 |
| BsmAI | GTCTC | 1 cut(s) | 440 |
| BsoBI | CYCGRG | 1 cut(s) | 298 |
| Bsp1286I | GDGCHC | 2 cut(s) | 299, 384 |
| Bsp13I | TCCGGA | 1 cut(s) | 353 |
| Bsp143I | GATC | 3 cut(s) | 100, 271, 356 |
| BspACI | CCGC | 1 cut(s) | 212 |
| BspEI | TCCGGA | 1 cut(s) | 353 |
| BspHI | TCATGA | 1 cut(s) | 280 |
| BspLI | GGNNCC | 1 cut(s) | 426 |
| BspMI | ACCTGC | 1 cut(s) | 131 |
| BspPI | GGATC | 1 cut(s) | 364 |
| BspQI | GCTCTTC | 1 cut(s) | 372 |
| BsrI | ACTGG | 1 cut(s) | 367 |
| BssECI | CCNNGG | 2 cut(s) | 118, 458 |
| BssMI | GATC | 3 cut(s) | 100, 271, 356 |
| BssT1I | CCWWGG | 2 cut(s) | 118, 458 |
| Bst6I | CTCTTC | 1 cut(s) | 372 |
| BstC8I | GCNNGC | 1 cut(s) | 435 |
| BstDEI | CTNAG | 1 cut(s) | 268 |
| BstF5I | GGATG | 2 cut(s) | 93, 220 |
| BstKTI | GATC | 3 cut(s) | 103, 274, 359 |
| BstMAI | GTCTC | 1 cut(s) | 440 |
| BstMBI | GATC | 3 cut(s) | 100, 271, 356 |
| BstNSI | RCATGY | 1 cut(s) | 414 |
| BstX2I | RGATCY | 1 cut(s) | 356 |
| BstYI | RGATCY | 1 cut(s) | 356 |
| BtsCI | GGATG | 2 cut(s) | 93, 220 |
| BveI | ACCTGC | 1 cut(s) | 131 |
| Cac8I | GCNNGC | 1 cut(s) | 435 |
| CciI | TCATGA | 1 cut(s) | 280 |
| Cfr13I | GGNCC | 1 cut(s) | 115 |
| Csp6I | GTAC | 5 cut(s) | 40, 144, 222, 239, 265 |
| CviAII | CATG | 4 cut(s) | 14, 112, 281, 411 |
| CviJI | RGCY | 7 cut(s) | 297, 329, 382, 394, 407, 433, 437 |
| CviKI_1 | RGCY | 7 cut(s) | 297, 329, 382, 394, 407, 433, 437 |
| CviQI | GTAC | 5 cut(s) | 40, 144, 222, 239, 265 |
| DdeI | CTNAG | 1 cut(s) | 268 |
| DpnI | GATC | 3 cut(s) | 102, 273, 358 |
| DpnII | GATC | 3 cut(s) | 100, 271, 356 |
| Eam1104I | CTCTTC | 1 cut(s) | 372 |
| EarI | CTCTTC | 1 cut(s) | 372 |
| Ecl136II | GAGCTC | 2 cut(s) | 297, 382 |
| Eco130I | CCWWGG | 2 cut(s) | 118, 458 |
| Eco24I | GRGCYC | 2 cut(s) | 299, 384 |
| Eco32I | GATATC | 1 cut(s) | 57 |
| Eco47I | GGWCC | 1 cut(s) | 115 |
| Eco53kI | GAGCTC | 2 cut(s) | 297, 382 |
| Eco88I | CYCGRG | 1 cut(s) | 298 |
| EcoICRI | GAGCTC | 2 cut(s) | 297, 382 |
| EcoRV | GATATC | 1 cut(s) | 57 |
| EcoT14I | CCWWGG | 2 cut(s) | 118, 458 |
| EcoT38I | GRGCYC | 2 cut(s) | 299, 384 |
| ErhI | CCWWGG | 2 cut(s) | 118, 458 |
| FaeI | CATG | 4 cut(s) | 17, 115, 284, 414 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 44, 76 |
| FatI | CATG | 4 cut(s) | 13, 111, 280, 410 |
| FblI | GTMKAC | 1 cut(s) | 75 |
| FokI | GGATG | 2 cut(s) | 100, 227 |
| FriOI | GRGCYC | 2 cut(s) | 299, 384 |
| FspBI | CTAG | 2 cut(s) | 104, 147 |
| GsuI | CTGGAG | 1 cut(s) | 384 |
| HapII | CCGG | 1 cut(s) | 354 |
| Hin1II | CATG | 4 cut(s) | 17, 115, 284, 414 |
| HincII | GTYRAC | 1 cut(s) | 96 |
| HindII | GTYRAC | 1 cut(s) | 96 |
| HinfI | GANTC | 1 cut(s) | 203 |
| HpaII | CCGG | 1 cut(s) | 354 |
| HphI | GGTGA | 2 cut(s) | 299, 314 |
| Hpy166II | GTNNAC | 5 cut(s) | 76, 96, 222, 239, 265 |
| Hpy188I | TCNGA | 1 cut(s) | 208 |
| Hpy188III | TCNNGA | 3 cut(s) | 104, 281, 354 |
| Hpy8I | GTNNAC | 5 cut(s) | 76, 96, 222, 239, 265 |
| HpyAV | CCTTC | 3 cut(s) | 70, 278, 397 |
| HpyCH4IV | ACGT | 1 cut(s) | 42 |
| HpyCH4V | TGCA | 1 cut(s) | 140 |
| HpyF3I | CTNAG | 1 cut(s) | 268 |
| HpySE526I | ACGT | 1 cut(s) | 42 |
| Hsp92II | CATG | 4 cut(s) | 17, 115, 284, 414 |
| Kpn2I | TCCGGA | 1 cut(s) | 353 |
| Kzo9I | GATC | 3 cut(s) | 100, 271, 356 |
| LguI | GCTCTTC | 1 cut(s) | 372 |
| LmnI | GCTCC | 1 cut(s) | 387 |
| LpnPI | CCDG | 8 cut(s) | 126, 144, 315, 339, 348, 367, 399, 419 |
| LweI | GCATC | 2 cut(s) | 175, 199 |
| MaeI | CTAG | 2 cut(s) | 104, 147 |
| MaeII | ACGT | 1 cut(s) | 42 |
| MaeIII | GTNAC | 1 cut(s) | 20 |
| MalI | GATC | 3 cut(s) | 102, 273, 358 |
| MboI | GATC | 3 cut(s) | 100, 271, 356 |
| MboII | GAAGA | 4 cut(s) | 16, 64, 317, 389 |
| MflI | RGATCY | 1 cut(s) | 356 |
| MhlI | GDGCHC | 2 cut(s) | 299, 384 |
| MnlI | CCTC | 1 cut(s) | 415 |
| MroI | TCCGGA | 1 cut(s) | 353 |
| MslI | CAYNNNNRTG | 2 cut(s) | 279, 285 |
| MspA1I | CMGCKG | 1 cut(s) | 329 |
| MspI | CCGG | 1 cut(s) | 354 |
| NdeII | GATC | 3 cut(s) | 100, 271, 356 |
| NlaIII | CATG | 4 cut(s) | 17, 115, 284, 414 |
| NlaIV | GGNNCC | 1 cut(s) | 426 |
| NmeAIII | GCCGAG | 1 cut(s) | 420 |
| NspI | RCATGY | 1 cut(s) | 414 |
| PagI | TCATGA | 1 cut(s) | 280 |
| PciI | ACATGT | 1 cut(s) | 410 |
| PciSI | GCTCTTC | 1 cut(s) | 372 |
| PfeI | GAWTC | 1 cut(s) | 203 |
| PscI | ACATGT | 1 cut(s) | 410 |
| Psp124BI | GAGCTC | 2 cut(s) | 299, 384 |
| PspN4I | GGNNCC | 1 cut(s) | 426 |
| PspPI | GGNCC | 1 cut(s) | 115 |
| PsuI | RGATCY | 1 cut(s) | 356 |
| PvuII | CAGCTG | 1 cut(s) | 329 |
| RsaI | GTAC | 5 cut(s) | 41, 145, 223, 240, 266 |
| RsaNI | GTAC | 5 cut(s) | 40, 144, 222, 239, 265 |
| RseI | CAYNNNNRTG | 2 cut(s) | 279, 285 |
| SacI | GAGCTC | 2 cut(s) | 299, 384 |
| SapI | GCTCTTC | 1 cut(s) | 372 |
| Sau3AI | GATC | 3 cut(s) | 100, 271, 356 |
| Sau96I | GGNCC | 1 cut(s) | 115 |
| SduI | GDGCHC | 2 cut(s) | 299, 384 |
| SetI | ASST | 8 cut(s) | 45, 145, 289, 299, 331, 384, 435, 464 |
| SfaNI | GCATC | 2 cut(s) | 175, 199 |
| SinI | GGWCC | 1 cut(s) | 115 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 279, 285 |
| SsiI | CCGC | 1 cut(s) | 212 |
| SspMI | CTAG | 2 cut(s) | 104, 147 |
| SstI | GAGCTC | 2 cut(s) | 299, 384 |
| StyI | CCWWGG | 2 cut(s) | 118, 458 |
| TaiI | ACGT | 1 cut(s) | 45 |
| TaqII | GACCGA | 1 cut(s) | 113 |
| TatI | WGTACW | 2 cut(s) | 221, 264 |
| TfiI | GAWTC | 1 cut(s) | 203 |
| TspDTI | ATGAA | 4 cut(s) | 17, 269, 297, 324 |
| VpaK11BI | GGWCC | 1 cut(s) | 115 |
| XbaI | TCTAGA | 1 cut(s) | 103 |
| XceI | RCATGY | 1 cut(s) | 414 |
| XmiI | GTMKAC | 1 cut(s) | 75 |
| XspI | CTAG | 2 cut(s) | 104, 147 |