Regulator of chromosome condensation (RCC1) repeat
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PB1-like | PF26130 | 84 - 191 | 1.3e-11 | PB1-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 257 |
| AciI | CCGC | 1 cut(s) | 154 |
| AclWI | GGATC | 1 cut(s) | 368 |
| AcsI | RAATTY | 2 cut(s) | 47, 123 |
| AfaI | GTAC | 3 cut(s) | 228, 428, 566 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 43, 482 |
| AgsI | TTSAA | 3 cut(s) | 30, 457, 544 |
| AjnI | CCWGG | 1 cut(s) | 326 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 470, 502 |
| AluBI | AGCT | 1 cut(s) | 167 |
| AluI | AGCT | 1 cut(s) | 167 |
| Alw26I | GTCTC | 1 cut(s) | 208 |
| AlwI | GGATC | 1 cut(s) | 368 |
| ApoI | RAATTY | 2 cut(s) | 47, 123 |
| AspA2I | CCTAGG | 1 cut(s) | 584 |
| AspS9I | GGNCC | 1 cut(s) | 581 |
| AsuHPI | GGTGA | 1 cut(s) | 538 |
| AvaII | GGWCC | 1 cut(s) | 581 |
| AvrII | CCTAGG | 1 cut(s) | 584 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 474, 506 |
| BccI | CCATC | 6 cut(s) | 35, 174, 296, 359, 500, 517 |
| BciT130I | CCWGG | 1 cut(s) | 328 |
| BcoDI | GTCTC | 1 cut(s) | 208 |
| BfaI | CTAG | 2 cut(s) | 371, 585 |
| BlnI | CCTAGG | 1 cut(s) | 584 |
| BmcAI | AGTACT | 1 cut(s) | 228 |
| Bme1390I | CCNGG | 1 cut(s) | 328 |
| Bme18I | GGWCC | 1 cut(s) | 581 |
| BmgT120I | GGNCC | 1 cut(s) | 581 |
| BmiI | GGNNCC | 2 cut(s) | 324, 582 |
| BmrFI | CCNGG | 1 cut(s) | 328 |
| BmsI | GCATC | 2 cut(s) | 502, 525 |
| BsaJI | CCNNGG | 3 cut(s) | 326, 464, 584 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 43, 482 |
| Bse3DI | GCAATG | 2 cut(s) | 120, 617 |
| BseBI | CCWGG | 1 cut(s) | 328 |
| BseDI | CCNNGG | 3 cut(s) | 326, 464, 584 |
| BseGI | GGATG | 2 cut(s) | 185, 307 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 43, 482 |
| BseMI | GCAATG | 2 cut(s) | 120, 617 |
| BseMII | CTCAG | 1 cut(s) | 600 |
| BseYI | CCCAGC | 1 cut(s) | 190 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 43, 482 |
| BsmAI | GTCTC | 1 cut(s) | 208 |
| Bsp1407I | TGTACA | 1 cut(s) | 564 |
| Bsp143I | GATC | 3 cut(s) | 373, 384, 495 |
| BspACI | CCGC | 1 cut(s) | 154 |
| BspCNI | CTCAG | 1 cut(s) | 601 |
| BspLI | GGNNCC | 2 cut(s) | 324, 582 |
| BspPI | GGATC | 1 cut(s) | 368 |
| BsrDI | GCAATG | 2 cut(s) | 120, 617 |
| BsrGI | TGTACA | 1 cut(s) | 564 |
| BssECI | CCNNGG | 3 cut(s) | 326, 464, 584 |
| BssMI | GATC | 3 cut(s) | 373, 384, 495 |
| BssNAI | GTATAC | 1 cut(s) | 258 |
| BssT1I | CCWWGG | 1 cut(s) | 584 |
| Bst1107I | GTATAC | 1 cut(s) | 258 |
| Bst2UI | CCWGG | 1 cut(s) | 328 |
| Bst4CI | ACNGT | 1 cut(s) | 562 |
| Bst6I | CTCTTC | 1 cut(s) | 542 |
| BstAUI | TGTACA | 1 cut(s) | 564 |
| BstC8I | GCNNGC | 1 cut(s) | 134 |
| BstDEI | CTNAG | 1 cut(s) | 609 |
| BstF5I | GGATG | 2 cut(s) | 185, 307 |
| BstKTI | GATC | 3 cut(s) | 376, 387, 498 |
| BstMAI | GTCTC | 1 cut(s) | 208 |
| BstMBI | GATC | 3 cut(s) | 373, 384, 495 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 614 |
| BstNI | CCWGG | 1 cut(s) | 328 |
| BstSCI | CCNGG | 1 cut(s) | 326 |
| BstX2I | RGATCY | 1 cut(s) | 373 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 523 |
| BstYI | RGATCY | 1 cut(s) | 373 |
| BstZ17I | GTATAC | 1 cut(s) | 258 |
| BtsCI | GGATG | 2 cut(s) | 185, 307 |
| Cac8I | GCNNGC | 1 cut(s) | 134 |
| Cfr13I | GGNCC | 1 cut(s) | 581 |
| Csp6I | GTAC | 3 cut(s) | 227, 427, 565 |
| CviAII | CATG | 4 cut(s) | 275, 309, 390, 416 |
| CviJI | RGCY | 4 cut(s) | 85, 103, 167, 439 |
| CviKI_1 | RGCY | 4 cut(s) | 85, 103, 167, 439 |
| CviQI | GTAC | 3 cut(s) | 227, 427, 565 |
| DdeI | CTNAG | 1 cut(s) | 609 |
| DpnI | GATC | 3 cut(s) | 375, 386, 497 |
| DpnII | GATC | 3 cut(s) | 373, 384, 495 |
| Eam1104I | CTCTTC | 1 cut(s) | 542 |
| EarI | CTCTTC | 1 cut(s) | 542 |
| EciI | GGCGGA | 1 cut(s) | 169 |
| Eco130I | CCWWGG | 1 cut(s) | 584 |
| Eco47I | GGWCC | 1 cut(s) | 581 |
| EcoO109I | RGGNCCY | 1 cut(s) | 581 |
| EcoRI | GAATTC | 1 cut(s) | 123 |
| EcoRII | CCWGG | 1 cut(s) | 326 |
| EcoT14I | CCWWGG | 1 cut(s) | 584 |
| EcoT22I | ATGCAT | 1 cut(s) | 421 |
| ErhI | CCWWGG | 1 cut(s) | 584 |
| FaeI | CATG | 4 cut(s) | 278, 312, 393, 419 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 428, 460 |
| FatI | CATG | 4 cut(s) | 274, 308, 389, 415 |
| FauNDI | CATATG | 1 cut(s) | 604 |
| FblI | GTMKAC | 1 cut(s) | 257 |
| FokI | GGATG | 2 cut(s) | 192, 314 |
| FspBI | CTAG | 2 cut(s) | 371, 585 |
| GsaI | CCCAGC | 1 cut(s) | 194 |
| Hin1II | CATG | 4 cut(s) | 278, 312, 393, 419 |
| HindIII | AAGCTT | 1 cut(s) | 165 |
| HinfI | GANTC | 1 cut(s) | 486 |
| HphI | GGTGA | 1 cut(s) | 538 |
| Hpy166II | GTNNAC | 2 cut(s) | 258, 565 |
| Hpy188I | TCNGA | 1 cut(s) | 468 |
| Hpy188III | TCNNGA | 5 cut(s) | 245, 371, 377, 457, 499 |
| Hpy8I | GTNNAC | 2 cut(s) | 258, 565 |
| HpyAV | CCTTC | 4 cut(s) | 112, 167, 216, 476 |
| HpyCH4III | ACNGT | 1 cut(s) | 562 |
| HpyCH4V | TGCA | 3 cut(s) | 132, 419, 617 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 614 |
| HpyF3I | CTNAG | 1 cut(s) | 609 |
| Hsp92II | CATG | 4 cut(s) | 278, 312, 393, 419 |
| Kzo9I | GATC | 3 cut(s) | 373, 384, 495 |
| LpnPI | CCDG | 7 cut(s) | 95, 204, 258, 313, 340, 415, 558 |
| LweI | GCATC | 2 cut(s) | 502, 525 |
| MaeI | CTAG | 2 cut(s) | 371, 585 |
| MalI | GATC | 3 cut(s) | 375, 386, 497 |
| MboI | GATC | 3 cut(s) | 373, 384, 495 |
| MboII | GAAGA | 5 cut(s) | 541, 556, 559, 608, 643 |
| MflI | RGATCY | 1 cut(s) | 373 |
| MluCI | AATT | 3 cut(s) | 47, 123, 231 |
| MmeI | TCCRAC | 1 cut(s) | 279 |
| MnlI | CCTC | 4 cut(s) | 103, 150, 474, 543 |
| Mph1103I | ATGCAT | 1 cut(s) | 421 |
| MseI | TTAA | 2 cut(s) | 333, 641 |
| MslI | CAYNNNNRTG | 1 cut(s) | 521 |
| MspR9I | CCNGG | 1 cut(s) | 328 |
| MvaI | CCWGG | 1 cut(s) | 328 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 614 |
| NdeI | CATATG | 1 cut(s) | 604 |
| NdeII | GATC | 3 cut(s) | 373, 384, 495 |
| NlaIII | CATG | 4 cut(s) | 278, 312, 393, 419 |
| NlaIV | GGNNCC | 2 cut(s) | 324, 582 |
| NsiI | ATGCAT | 1 cut(s) | 421 |
| PfeI | GAWTC | 1 cut(s) | 486 |
| PpuMI | RGGWCCY | 1 cut(s) | 581 |
| Psp5II | RGGWCCY | 1 cut(s) | 581 |
| Psp6I | CCWGG | 1 cut(s) | 326 |
| PspFI | CCCAGC | 1 cut(s) | 190 |
| PspGI | CCWGG | 1 cut(s) | 326 |
| PspN4I | GGNNCC | 2 cut(s) | 324, 582 |
| PspPI | GGNCC | 1 cut(s) | 581 |
| PspPPI | RGGWCCY | 1 cut(s) | 581 |
| PsuI | RGATCY | 1 cut(s) | 373 |
| RsaI | GTAC | 3 cut(s) | 228, 428, 566 |
| RsaNI | GTAC | 3 cut(s) | 227, 427, 565 |
| RseI | CAYNNNNRTG | 1 cut(s) | 521 |
| SaqAI | TTAA | 2 cut(s) | 333, 641 |
| Sau3AI | GATC | 3 cut(s) | 373, 384, 495 |
| Sau96I | GGNCC | 1 cut(s) | 581 |
| ScaI | AGTACT | 1 cut(s) | 228 |
| ScrFI | CCNGG | 1 cut(s) | 328 |
| SetI | ASST | 7 cut(s) | 169, 208, 324, 332, 363, 466, 577 |
| SfaNI | GCATC | 2 cut(s) | 502, 525 |
| SinI | GGWCC | 1 cut(s) | 581 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 521 |
| Sse9I | AATT | 3 cut(s) | 47, 123, 231 |
| SsiI | CCGC | 1 cut(s) | 154 |
| SspI | AATATT | 2 cut(s) | 90, 409 |
| SspMI | CTAG | 2 cut(s) | 371, 585 |
| StyD4I | CCNGG | 1 cut(s) | 326 |
| StyI | CCWWGG | 1 cut(s) | 584 |
| TaaI | ACNGT | 1 cut(s) | 562 |
| TaqI | TCGA | 1 cut(s) | 235 |
| TasI | AATT | 3 cut(s) | 47, 123, 231 |
| TatI | WGTACW | 2 cut(s) | 226, 564 |
| TfiI | GAWTC | 1 cut(s) | 486 |
| Tru1I | TTAA | 2 cut(s) | 333, 641 |
| Tru9I | TTAA | 2 cut(s) | 333, 641 |
| TspDTI | ATGAA | 6 cut(s) | 131, 263, 416, 478, 495, 644 |
| TspGWI | ACGGA | 1 cut(s) | 226 |
| VpaK11BI | GGWCC | 1 cut(s) | 581 |
| XapI | RAATTY | 2 cut(s) | 47, 123 |
| XbaI | TCTAGA | 1 cut(s) | 370 |
| XmaJI | CCTAGG | 1 cut(s) | 584 |
| XmiI | GTMKAC | 1 cut(s) | 257 |
| XspI | CTAG | 2 cut(s) | 371, 585 |
| ZrmI | AGTACT | 1 cut(s) | 228 |
| Zsp2I | ATGCAT | 1 cut(s) | 421 |