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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 741, 1854 |
| Acc36I | ACCTGC | 1 cut(s) | 1415 |
| Acc65I | GGTACC | 1 cut(s) | 28 |
| AccB1I | GGYRCC | 1 cut(s) | 28 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1046 |
| AccI | GTMKAC | 3 cut(s) | 216, 768, 1246 |
| AclWI | GGATC | 6 cut(s) | 563, 1310, 2027, 2069, 2248, 2261 |
| AcoI | YGGCCR | 1 cut(s) | 1360 |
| AcsI | RAATTY | 1 cut(s) | 1729 |
| AcuI | CTGAAG | 3 cut(s) | 573, 1427, 1484 |
| AfaI | GTAC | 4 cut(s) | 30, 101, 330, 1522 |
| AfeI | AGCGCT | 1 cut(s) | 1256 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 190, 578, 1046, 1478, 1774 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 178 |
| AjnI | CCWGG | 4 cut(s) | 1277, 1357, 1747, 1843 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1059, 1091 |
| AleI | CACNNNNGTG | 1 cut(s) | 1328 |
| Alw21I | GWGCWC | 2 cut(s) | 1405, 1701 |
| Alw26I | GTCTC | 2 cut(s) | 896, 1207 |
| Alw44I | GTGCAC | 1 cut(s) | 1401 |
| AlwI | GGATC | 6 cut(s) | 563, 1310, 2027, 2069, 2248, 2261 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1707 |
| Aor51HI | AGCGCT | 1 cut(s) | 1256 |
| AoxI | GGCC | 3 cut(s) | 1360, 1480, 1657 |
| ApaLI | GTGCAC | 1 cut(s) | 1401 |
| ApeKI | GCWGC | 3 cut(s) | 950, 1235, 2126 |
| ApoI | RAATTY | 1 cut(s) | 1729 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1877, 1909 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 480, 651 |
| Asp718I | GGTACC | 1 cut(s) | 28 |
| AspLEI | GCGC | 1 cut(s) | 1257 |
| AspS9I | GGNCC | 4 cut(s) | 1632, 1657, 1765, 1822 |
| AsuHPI | GGTGA | 5 cut(s) | 62, 217, 392, 483, 528 |
| AvaII | GGWCC | 3 cut(s) | 1632, 1765, 1822 |
| BaeGI | GKGCMC | 1 cut(s) | 1405 |
| BalI | TGGCCA | 1 cut(s) | 1362 |
| BamHI | GGATCC | 1 cut(s) | 2253 |
| BanI | GGYRCC | 1 cut(s) | 28 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 12, 44 |
| BbsI | GAAGAC | 1 cut(s) | 843 |
| Bbv12I | GWGCWC | 2 cut(s) | 1405, 1701 |
| BbvI | GCAGC | 3 cut(s) | 937, 1222, 2113 |
| BccI | CCATC | 5 cut(s) | 1371, 1405, 1445, 1613, 2232 |
| BciT130I | CCWGG | 4 cut(s) | 1279, 1359, 1749, 1845 |
| BclI | TGATCA | 1 cut(s) | 780 |
| BcoDI | GTCTC | 2 cut(s) | 896, 1207 |
| BfaI | CTAG | 6 cut(s) | 798, 984, 1448, 1583, 1896, 2193 |
| BfmI | CTRYAG | 1 cut(s) | 936 |
| BfoI | RGCGCY | 1 cut(s) | 1258 |
| BfuAI | ACCTGC | 1 cut(s) | 1415 |
| BglII | AGATCT | 1 cut(s) | 370 |
| BisI | GCNGC | 3 cut(s) | 951, 1236, 2127 |
| BlsI | GCNGC | 3 cut(s) | 952, 1237, 2128 |
| BmcAI | AGTACT | 1 cut(s) | 1522 |
| Bme1390I | CCNGG | 4 cut(s) | 1279, 1359, 1749, 1845 |
| Bme18I | GGWCC | 3 cut(s) | 1632, 1765, 1822 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 178 |
| BmgT120I | GGNCC | 4 cut(s) | 1632, 1657, 1765, 1822 |
| BmiI | GGNNCC | 6 cut(s) | 30, 654, 675, 1157, 1842, 2255 |
| BmrFI | CCNGG | 4 cut(s) | 1279, 1359, 1749, 1845 |
| BmsI | GCATC | 7 cut(s) | 82, 265, 295, 784, 796, 941, 1498 |
| BpiI | GAAGAC | 1 cut(s) | 843 |
| BpmI | CTGGAG | 2 cut(s) | 660, 2126 |
| BpuEI | CTTGAG | 2 cut(s) | 645, 1271 |
| BsaAI | YACGTR | 1 cut(s) | 70 |
| BsaJI | CCNNGG | 7 cut(s) | 103, 494, 1278, 1357, 1748, 1812, 1844 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1541, 1571, 2209, 2239 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 190, 578, 1046, 1478, 1774 |
| Bse1I | ACTGG | 6 cut(s) | 254, 677, 872, 1370, 1895, 2109 |
| Bse3DI | GCAATG | 1 cut(s) | 1548 |
| BseBI | CCWGG | 4 cut(s) | 1279, 1359, 1749, 1845 |
| BseDI | CCNNGG | 7 cut(s) | 103, 494, 1278, 1357, 1748, 1812, 1844 |
| BseGI | GGATG | 5 cut(s) | 73, 835, 1389, 1513, 2260 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 190, 578, 1046, 1478, 1774 |
| BseMI | GCAATG | 1 cut(s) | 1548 |
| BseMII | CTCAG | 5 cut(s) | 69, 738, 1107, 1175, 1960 |
| BseNI | ACTGG | 6 cut(s) | 254, 677, 872, 1370, 1895, 2109 |
| BseRI | GAGGAG | 3 cut(s) | 2202, 2230, 2233 |
| BseSI | GKGCMC | 1 cut(s) | 1405 |
| BseXI | GCAGC | 3 cut(s) | 937, 1222, 2113 |
| BseYI | CCCAGC | 1 cut(s) | 1625 |
| BsgI | GTGCAG | 2 cut(s) | 1211, 1713 |
| BshFI | GGCC | 3 cut(s) | 1362, 1482, 1659 |
| BshNI | GGYRCC | 1 cut(s) | 28 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1405, 1701 |
| BslFI | GGGAC | 2 cut(s) | 166, 2066 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 190, 578, 1046, 1478, 1774 |
| BsmAI | GTCTC | 2 cut(s) | 896, 1207 |
| BsmFI | GGGAC | 2 cut(s) | 166, 2066 |
| BsmI | GAATGC | 1 cut(s) | 2139 |
| BsnI | GGCC | 3 cut(s) | 1362, 1482, 1659 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1405, 1701 |
| Bsp143I | GATC | 9 cut(s) | 144, 370, 516, 568, 780, 1315, 2019, 2074, 2253 |
| Bsp19I | CCATGG | 1 cut(s) | 103 |
| BspANI | GGCC | 3 cut(s) | 1362, 1482, 1659 |
| BspCNI | CTCAG | 5 cut(s) | 70, 739, 1106, 1174, 1959 |
| BspHI | TCATGA | 3 cut(s) | 484, 916, 2269 |
| BspLI | GGNNCC | 6 cut(s) | 30, 654, 675, 1157, 1842, 2255 |
| BspMI | ACCTGC | 1 cut(s) | 1415 |
| BspPI | GGATC | 6 cut(s) | 563, 1310, 2027, 2069, 2248, 2261 |
| BspT107I | GGYRCC | 1 cut(s) | 28 |
| BsrDI | GCAATG | 1 cut(s) | 1548 |
| BsrI | ACTGG | 6 cut(s) | 254, 677, 872, 1370, 1895, 2109 |
| BssECI | CCNNGG | 7 cut(s) | 103, 494, 1278, 1357, 1748, 1812, 1844 |
| BssMI | GATC | 9 cut(s) | 144, 370, 516, 568, 780, 1315, 2019, 2074, 2253 |
| BssNAI | GTATAC | 1 cut(s) | 1247 |
| BssT1I | CCWWGG | 3 cut(s) | 103, 494, 1812 |
| Bst1107I | GTATAC | 1 cut(s) | 1247 |
| Bst2UI | CCWGG | 4 cut(s) | 1279, 1359, 1749, 1845 |
| Bst4CI | ACNGT | 4 cut(s) | 907, 1272, 1330, 1915 |
| Bst6I | CTCTTC | 9 cut(s) | 15, 516, 642, 885, 894, 1062, 1301, 1460, 2027 |
| BstBAI | YACGTR | 1 cut(s) | 70 |
| BstC8I | GCNNGC | 7 cut(s) | 667, 981, 1194, 1215, 1484, 1661, 1977 |
| BstDEI | CTNAG | 8 cut(s) | 78, 358, 747, 763, 1093, 1161, 1785, 1946 |
| BstDSI | CCRYGG | 1 cut(s) | 103 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 188, 1476 |
| BstF5I | GGATG | 5 cut(s) | 73, 835, 1389, 1513, 2260 |
| BstH2I | RGCGCY | 1 cut(s) | 1258 |
| BstHHI | GCGC | 1 cut(s) | 1257 |
| BstKTI | GATC | 9 cut(s) | 147, 373, 519, 571, 783, 1318, 2022, 2077, 2256 |
| BstMAI | GTCTC | 2 cut(s) | 896, 1207 |
| BstMBI | GATC | 9 cut(s) | 144, 370, 516, 568, 780, 1315, 2019, 2074, 2253 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 671 |
| BstNI | CCWGG | 4 cut(s) | 1279, 1359, 1749, 1845 |
| BstNSI | RCATGY | 2 cut(s) | 1265, 2005 |
| BstSCI | CCNGG | 4 cut(s) | 1277, 1357, 1747, 1843 |
| BstSFI | CTRYAG | 1 cut(s) | 936 |
| BstSLI | GKGCMC | 1 cut(s) | 1405 |
| BstV1I | GCAGC | 3 cut(s) | 937, 1222, 2113 |
| BstV2I | GAAGAC | 1 cut(s) | 843 |
| BstX2I | RGATCY | 4 cut(s) | 370, 568, 2074, 2253 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 435, 1819 |
| BstYI | RGATCY | 4 cut(s) | 370, 568, 2074, 2253 |
| BstZ17I | GTATAC | 1 cut(s) | 1247 |
| BsuRI | GGCC | 3 cut(s) | 1362, 1482, 1659 |
| BtgI | CCRYGG | 1 cut(s) | 103 |
| BtsCI | GGATG | 5 cut(s) | 73, 835, 1389, 1513, 2260 |
| BtsI | GCAGTG | 1 cut(s) | 624 |
| BtsIMutI | CAGTG | 7 cut(s) | 624, 684, 790, 1403, 1888, 1920, 1954 |
| BveI | ACCTGC | 1 cut(s) | 1415 |
| Cac8I | GCNNGC | 7 cut(s) | 667, 981, 1194, 1215, 1484, 1661, 1977 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1707 |
| CciI | TCATGA | 3 cut(s) | 484, 916, 2269 |
| CfoI | GCGC | 1 cut(s) | 1257 |
| Cfr13I | GGNCC | 4 cut(s) | 1632, 1657, 1765, 1822 |
| Csp6I | GTAC | 4 cut(s) | 29, 100, 329, 1521 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 283, 318 |
| CviQI | GTAC | 4 cut(s) | 29, 100, 329, 1521 |
| DdeI | CTNAG | 8 cut(s) | 78, 358, 747, 763, 1093, 1161, 1785, 1946 |
| DpnI | GATC | 9 cut(s) | 146, 372, 518, 570, 782, 1317, 2021, 2076, 2255 |
| DpnII | GATC | 9 cut(s) | 144, 370, 516, 568, 780, 1315, 2019, 2074, 2253 |
| DraI | TTTAAA | 1 cut(s) | 1420 |
| DriI | GACNNNNNGTC | 1 cut(s) | 178 |
| EaeI | YGGCCR | 1 cut(s) | 1360 |
| Eam1104I | CTCTTC | 9 cut(s) | 15, 516, 642, 885, 894, 1062, 1301, 1460, 2027 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 178 |
| EarI | CTCTTC | 9 cut(s) | 15, 516, 642, 885, 894, 1062, 1301, 1460, 2027 |
| Eco130I | CCWWGG | 3 cut(s) | 103, 494, 1812 |
| Eco47I | GGWCC | 3 cut(s) | 1632, 1765, 1822 |
| Eco47III | AGCGCT | 1 cut(s) | 1256 |
| Eco57I | CTGAAG | 3 cut(s) | 573, 1427, 1484 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 188, 1476 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1657 |
| EcoRII | CCWGG | 4 cut(s) | 1277, 1357, 1747, 1843 |
| EcoT14I | CCWWGG | 3 cut(s) | 103, 494, 1812 |
| ErhI | CCWWGG | 3 cut(s) | 103, 494, 1812 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1331, 1363 |
| FaqI | GGGAC | 2 cut(s) | 166, 2066 |
| FauNDI | CATATG | 1 cut(s) | 2146 |
| FbaI | TGATCA | 1 cut(s) | 780 |
| FblI | GTMKAC | 3 cut(s) | 216, 768, 1246 |
| Fnu4HI | GCNGC | 3 cut(s) | 951, 1236, 2127 |
| FokI | GGATG | 5 cut(s) | 60, 842, 1396, 1520, 2247 |
| Fsp4HI | GCNGC | 3 cut(s) | 951, 1236, 2127 |
| FspBI | CTAG | 6 cut(s) | 798, 984, 1448, 1583, 1896, 2193 |
| GlaI | GCGC | 1 cut(s) | 1256 |
| GluI | GCNGC | 3 cut(s) | 951, 1236, 2127 |
| GsaI | CCCAGC | 1 cut(s) | 1629 |
| GsuI | CTGGAG | 2 cut(s) | 660, 2126 |
| HaeII | RGCGCY | 1 cut(s) | 1258 |
| HaeIII | GGCC | 3 cut(s) | 1362, 1482, 1659 |
| HhaI | GCGC | 1 cut(s) | 1257 |
| Hin6I | GCGC | 1 cut(s) | 1255 |
| HinP1I | GCGC | 1 cut(s) | 1255 |
| HincII | GTYRAC | 1 cut(s) | 1791 |
| HindII | GTYRAC | 1 cut(s) | 1791 |
| HindIII | AAGCTT | 2 cut(s) | 287, 1954 |
| HinfI | GANTC | 9 cut(s) | 197, 488, 533, 913, 1058, 1200, 1468, 1983, 2038 |
| HphI | GGTGA | 5 cut(s) | 62, 217, 392, 483, 528 |
| Hpy188I | TCNGA | 6 cut(s) | 282, 394, 1063, 1096, 1464, 1645 |
| Hpy188III | TCNNGA | 9 cut(s) | 77, 94, 485, 917, 1127, 1378, 1583, 2072, 2270 |
| HpyAV | CCTTC | 8 cut(s) | 38, 579, 752, 955, 1225, 1756, 1975, 2059 |
| HpyCH4III | ACNGT | 4 cut(s) | 907, 1272, 1330, 1915 |
| HpyCH4IV | ACGT | 1 cut(s) | 69 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 671 |
| HpyF3I | CTNAG | 8 cut(s) | 78, 358, 747, 763, 1093, 1161, 1785, 1946 |
| HpySE526I | ACGT | 1 cut(s) | 69 |
| HspAI | GCGC | 1 cut(s) | 1255 |
| KpnI | GGTACC | 1 cut(s) | 32 |
| Ksp22I | TGATCA | 1 cut(s) | 780 |
| Kzo9I | GATC | 9 cut(s) | 144, 370, 516, 568, 780, 1315, 2019, 2074, 2253 |
| LmnI | GCTCC | 5 cut(s) | 679, 1549, 1622, 1840, 2189 |
| Lsp1109I | GCAGC | 3 cut(s) | 937, 1222, 2113 |
| LweI | GCATC | 7 cut(s) | 82, 265, 295, 784, 796, 941, 1498 |
| MaeI | CTAG | 6 cut(s) | 798, 984, 1448, 1583, 1896, 2193 |
| MaeII | ACGT | 1 cut(s) | 69 |
| MaeIII | GTNAC | 4 cut(s) | 380, 683, 1899, 1925 |
| MalI | GATC | 9 cut(s) | 146, 372, 518, 570, 782, 1317, 2021, 2076, 2255 |
| MboI | GATC | 9 cut(s) | 144, 370, 516, 568, 780, 1315, 2019, 2074, 2253 |
| MflI | RGATCY | 4 cut(s) | 370, 568, 2074, 2253 |
| MhlI | GDGCHC | 2 cut(s) | 1405, 1701 |
| MlsI | TGGCCA | 1 cut(s) | 1362 |
| MluCI | AATT | 7 cut(s) | 64, 111, 186, 364, 624, 1206, 1729 |
| MluNI | TGGCCA | 1 cut(s) | 1362 |
| MlyI | GAGTC | 3 cut(s) | 1209, 1477, 1992 |
| MmeI | TCCRAC | 5 cut(s) | 680, 852, 970, 1480, 1550 |
| Mox20I | TGGCCA | 1 cut(s) | 1362 |
| MroXI | GAANNNNTTC | 2 cut(s) | 480, 651 |
| MscI | TGGCCA | 1 cut(s) | 1362 |
| MseI | TTAA | 6 cut(s) | 591, 1338, 1419, 1611, 1920, 1959 |
| MslI | CAYNNNNRTG | 3 cut(s) | 314, 776, 1328 |
| Msp20I | TGGCCA | 1 cut(s) | 1362 |
| MspA1I | CMGCKG | 1 cut(s) | 1496 |
| MspR9I | CCNGG | 4 cut(s) | 1279, 1359, 1749, 1845 |
| Mva1269I | GAATGC | 1 cut(s) | 2139 |
| MvaI | CCWGG | 4 cut(s) | 1279, 1359, 1749, 1845 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 671 |
| NcoI | CCATGG | 1 cut(s) | 103 |
| NdeI | CATATG | 1 cut(s) | 2146 |
| NdeII | GATC | 9 cut(s) | 144, 370, 516, 568, 780, 1315, 2019, 2074, 2253 |
| NlaIV | GGNNCC | 6 cut(s) | 30, 654, 675, 1157, 1842, 2255 |
| NmuCI | GTSAC | 4 cut(s) | 380, 683, 1899, 1925 |
| NspI | RCATGY | 2 cut(s) | 1265, 2005 |
| OliI | CACNNNNGTG | 1 cut(s) | 1328 |
| PagI | TCATGA | 3 cut(s) | 484, 916, 2269 |
| PctI | GAATGC | 1 cut(s) | 2139 |
| PdmI | GAANNNNTTC | 2 cut(s) | 480, 651 |
| PfeI | GAWTC | 6 cut(s) | 197, 488, 533, 913, 1058, 2038 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1046 |
| PkrI | GCNGC | 3 cut(s) | 952, 1237, 2128 |
| PleI | GAGTC | 3 cut(s) | 1208, 1476, 1991 |
| PpsI | GAGTC | 3 cut(s) | 1208, 1476, 1991 |
| Ppu21I | YACGTR | 1 cut(s) | 70 |
| PsiI | TTATAA | 2 cut(s) | 741, 1854 |
| Psp6I | CCWGG | 4 cut(s) | 1277, 1357, 1747, 1843 |
| PspFI | CCCAGC | 1 cut(s) | 1625 |
| PspGI | CCWGG | 4 cut(s) | 1277, 1357, 1747, 1843 |
| PspN4I | GGNNCC | 6 cut(s) | 30, 654, 675, 1157, 1842, 2255 |
| PspPI | GGNCC | 4 cut(s) | 1632, 1657, 1765, 1822 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1707 |
| PsuI | RGATCY | 4 cut(s) | 370, 568, 2074, 2253 |
| PvuII | CAGCTG | 1 cut(s) | 1496 |
| RsaI | GTAC | 4 cut(s) | 30, 101, 330, 1522 |
| RsaNI | GTAC | 4 cut(s) | 29, 100, 329, 1521 |
| RseI | CAYNNNNRTG | 3 cut(s) | 314, 776, 1328 |
| SaqAI | TTAA | 6 cut(s) | 591, 1338, 1419, 1611, 1920, 1959 |
| SatI | GCNGC | 3 cut(s) | 951, 1236, 2127 |
| Sau3AI | GATC | 9 cut(s) | 144, 370, 516, 568, 780, 1315, 2019, 2074, 2253 |
| Sau96I | GGNCC | 4 cut(s) | 1632, 1657, 1765, 1822 |
| ScaI | AGTACT | 1 cut(s) | 1522 |
| SchI | GAGTC | 3 cut(s) | 1209, 1477, 1992 |
| ScrFI | CCNGG | 4 cut(s) | 1279, 1359, 1749, 1845 |
| SduI | GDGCHC | 2 cut(s) | 1405, 1701 |
| SfaNI | GCATC | 7 cut(s) | 82, 265, 295, 784, 796, 941, 1498 |
| SfcI | CTRYAG | 1 cut(s) | 936 |
| SinI | GGWCC | 3 cut(s) | 1632, 1765, 1822 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 314, 776, 1328 |
| SmlI | CTYRAG | 2 cut(s) | 660, 1250 |
| SmoI | CTYRAG | 2 cut(s) | 660, 1250 |
| Sse9I | AATT | 7 cut(s) | 64, 111, 186, 364, 624, 1206, 1729 |
| SspMI | CTAG | 6 cut(s) | 798, 984, 1448, 1583, 1896, 2193 |
| StyD4I | CCNGG | 4 cut(s) | 1277, 1357, 1747, 1843 |
| StyI | CCWWGG | 3 cut(s) | 103, 494, 1812 |
| TaaI | ACNGT | 4 cut(s) | 907, 1272, 1330, 1915 |
| TaiI | ACGT | 1 cut(s) | 72 |
| TaqI | TCGA | 2 cut(s) | 519, 2169 |
| TasI | AATT | 7 cut(s) | 64, 111, 186, 364, 624, 1206, 1729 |
| TatI | WGTACW | 1 cut(s) | 1520 |
| TfiI | GAWTC | 6 cut(s) | 197, 488, 533, 913, 1058, 2038 |
| Tru1I | TTAA | 6 cut(s) | 591, 1338, 1419, 1611, 1920, 1959 |
| Tru9I | TTAA | 6 cut(s) | 591, 1338, 1419, 1611, 1920, 1959 |
| TscAI | CASTG | 7 cut(s) | 624, 684, 790, 1410, 1895, 1920, 1954 |
| TseFI | GTSAC | 4 cut(s) | 380, 683, 1899, 1925 |
| TseI | GCWGC | 3 cut(s) | 950, 1235, 2126 |
| Tsp45I | GTSAC | 4 cut(s) | 380, 683, 1899, 1925 |
| TspGWI | ACGGA | 1 cut(s) | 53 |
| TspRI | CASTG | 7 cut(s) | 624, 684, 790, 1410, 1895, 1920, 1954 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1046 |
| VneI | GTGCAC | 1 cut(s) | 1401 |
| VpaK11BI | GGWCC | 3 cut(s) | 1632, 1765, 1822 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 188, 1476 |
| XapI | RAATTY | 1 cut(s) | 1729 |
| XbaI | TCTAGA | 1 cut(s) | 1582 |
| XceI | RCATGY | 2 cut(s) | 1265, 2005 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1147, 1887 |
| XmiI | GTMKAC | 3 cut(s) | 216, 768, 1246 |
| XmnI | GAANNNNTTC | 2 cut(s) | 480, 651 |
| XspI | CTAG | 6 cut(s) | 798, 984, 1448, 1583, 1896, 2193 |
| ZrmI | AGTACT | 1 cut(s) | 1522 |