No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SWIM | PF04434 | 70 - 96 | 3.5e-08 | SWIM zinc finger |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 635 |
| Acc36I | ACCTGC | 2 cut(s) | 316, 635 |
| AccB1I | GGYRCC | 1 cut(s) | 703 |
| AciI | CCGC | 1 cut(s) | 735 |
| AclWI | GGATC | 1 cut(s) | 753 |
| AcvI | CACGTG | 1 cut(s) | 228 |
| AfaI | GTAC | 1 cut(s) | 232 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 383 |
| AflII | CTTAAG | 1 cut(s) | 214 |
| AflIII | ACRYGT | 2 cut(s) | 225, 227 |
| AgsI | TTSAA | 3 cut(s) | 62, 577, 784 |
| AjnI | CCWGG | 2 cut(s) | 478, 564 |
| AleI | CACNNNNGTG | 1 cut(s) | 153 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 150, 182 |
| AluBI | AGCT | 2 cut(s) | 493, 635 |
| AluI | AGCT | 2 cut(s) | 493, 635 |
| AlwI | GGATC | 1 cut(s) | 753 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 308 |
| AoxI | GGCC | 6 cut(s) | 86, 452, 583, 615, 667, 898 |
| ApeKI | GCWGC | 6 cut(s) | 493, 626, 629, 632, 697, 875 |
| AspA2I | CCTAGG | 1 cut(s) | 89 |
| AspS9I | GGNCC | 4 cut(s) | 22, 86, 126, 898 |
| AsuHPI | GGTGA | 5 cut(s) | 167, 197, 398, 494, 659 |
| AvaII | GGWCC | 2 cut(s) | 22, 126 |
| AvrII | CCTAGG | 1 cut(s) | 89 |
| BanI | GGYRCC | 1 cut(s) | 703 |
| BbrPI | CACGTG | 1 cut(s) | 228 |
| BbsI | GAAGAC | 1 cut(s) | 791 |
| BbvI | GCAGC | 6 cut(s) | 480, 638, 641, 644, 709, 887 |
| BccI | CCATC | 1 cut(s) | 31 |
| BciT130I | CCWGG | 2 cut(s) | 480, 566 |
| BciVI | GTATCC | 1 cut(s) | 423 |
| BfaI | CTAG | 5 cut(s) | 90, 540, 678, 762, 825 |
| BfmI | CTRYAG | 1 cut(s) | 873 |
| BfrI | CTTAAG | 1 cut(s) | 214 |
| BfuAI | ACCTGC | 2 cut(s) | 316, 635 |
| BfuI | GTATCC | 1 cut(s) | 423 |
| BisI | GCNGC | 6 cut(s) | 494, 627, 630, 633, 698, 876 |
| BlnI | CCTAGG | 1 cut(s) | 89 |
| BlsI | GCNGC | 6 cut(s) | 495, 628, 631, 634, 699, 877 |
| Bme1390I | CCNGG | 2 cut(s) | 480, 566 |
| Bme18I | GGWCC | 2 cut(s) | 22, 126 |
| BmgT120I | GGNCC | 4 cut(s) | 22, 86, 126, 898 |
| BmiI | GGNNCC | 3 cut(s) | 221, 477, 705 |
| BmrFI | CCNGG | 2 cut(s) | 480, 566 |
| BmsI | GCATC | 2 cut(s) | 324, 525 |
| BpiI | GAAGAC | 1 cut(s) | 791 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 113, 145 |
| BpmI | CTGGAG | 1 cut(s) | 198 |
| BsaAI | YACGTR | 1 cut(s) | 228 |
| BsaJI | CCNNGG | 4 cut(s) | 89, 471, 789, 802 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 383 |
| Bse1I | ACTGG | 1 cut(s) | 181 |
| Bse3DI | GCAATG | 1 cut(s) | 843 |
| BseBI | CCWGG | 2 cut(s) | 480, 566 |
| BseDI | CCNNGG | 4 cut(s) | 89, 471, 789, 802 |
| BseGI | GGATG | 4 cut(s) | 42, 373, 397, 540 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 383 |
| BseMI | GCAATG | 1 cut(s) | 843 |
| BseMII | CTCAG | 1 cut(s) | 869 |
| BseNI | ACTGG | 1 cut(s) | 181 |
| BseXI | GCAGC | 6 cut(s) | 480, 638, 641, 644, 709, 887 |
| BsgI | GTGCAG | 1 cut(s) | 294 |
| BshFI | GGCC | 6 cut(s) | 88, 454, 585, 617, 669, 900 |
| BshNI | GGYRCC | 1 cut(s) | 703 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 383 |
| BsnI | GGCC | 6 cut(s) | 88, 454, 585, 617, 669, 900 |
| Bsp1407I | TGTACA | 1 cut(s) | 230 |
| Bsp143I | GATC | 3 cut(s) | 171, 745, 750 |
| Bsp19I | CCATGG | 1 cut(s) | 789 |
| BspACI | CCGC | 1 cut(s) | 735 |
| BspANI | GGCC | 6 cut(s) | 88, 454, 585, 617, 669, 900 |
| BspCNI | CTCAG | 1 cut(s) | 868 |
| BspLI | GGNNCC | 3 cut(s) | 221, 477, 705 |
| BspMAI | CTGCAG | 1 cut(s) | 877 |
| BspMI | ACCTGC | 2 cut(s) | 316, 635 |
| BspPI | GGATC | 1 cut(s) | 753 |
| BspT107I | GGYRCC | 1 cut(s) | 703 |
| BspTI | CTTAAG | 1 cut(s) | 214 |
| BsrDI | GCAATG | 1 cut(s) | 843 |
| BsrGI | TGTACA | 1 cut(s) | 230 |
| BsrI | ACTGG | 1 cut(s) | 181 |
| BssECI | CCNNGG | 4 cut(s) | 89, 471, 789, 802 |
| BssMI | GATC | 3 cut(s) | 171, 745, 750 |
| BssT1I | CCWWGG | 4 cut(s) | 89, 471, 789, 802 |
| Bst2UI | CCWGG | 2 cut(s) | 480, 566 |
| Bst4CI | ACNGT | 1 cut(s) | 152 |
| Bst6I | CTCTTC | 2 cut(s) | 458, 677 |
| BstAFI | CTTAAG | 1 cut(s) | 214 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 308 |
| BstAUI | TGTACA | 1 cut(s) | 230 |
| BstBAI | YACGTR | 1 cut(s) | 228 |
| BstC8I | GCNNGC | 3 cut(s) | 204, 671, 702 |
| BstDEI | CTNAG | 2 cut(s) | 612, 855 |
| BstDSI | CCRYGG | 1 cut(s) | 789 |
| BstF5I | GGATG | 4 cut(s) | 42, 373, 397, 540 |
| BstKTI | GATC | 3 cut(s) | 174, 748, 753 |
| BstMBI | GATC | 3 cut(s) | 171, 745, 750 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 281, 308, 570, 623, 632, 641, 694, 884 |
| BstNI | CCWGG | 2 cut(s) | 480, 566 |
| BstNSI | RCATGY | 2 cut(s) | 206, 237 |
| BstSCI | CCNGG | 2 cut(s) | 478, 564 |
| BstSFI | CTRYAG | 1 cut(s) | 873 |
| BstV1I | GCAGC | 6 cut(s) | 480, 638, 641, 644, 709, 887 |
| BstV2I | GAAGAC | 1 cut(s) | 791 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 176 |
| BsuI | GTATCC | 1 cut(s) | 423 |
| BsuRI | GGCC | 6 cut(s) | 88, 454, 585, 617, 669, 900 |
| BtgI | CCRYGG | 1 cut(s) | 789 |
| BtsCI | GGATG | 4 cut(s) | 42, 373, 397, 540 |
| BtsI | GCAGTG | 1 cut(s) | 213 |
| BtsIMutI | CAGTG | 3 cut(s) | 157, 174, 213 |
| BveI | ACCTGC | 2 cut(s) | 316, 635 |
| Cac8I | GCNNGC | 3 cut(s) | 204, 671, 702 |
| CaiI | CAGNNNCTG | 1 cut(s) | 308 |
| Cfr13I | GGNCC | 4 cut(s) | 22, 86, 126, 898 |
| CsiI | ACCWGGT | 1 cut(s) | 478 |
| Csp6I | GTAC | 1 cut(s) | 231 |
| CviAII | CATG | 6 cut(s) | 161, 203, 234, 272, 790, 842 |
| CviQI | GTAC | 1 cut(s) | 231 |
| DdeI | CTNAG | 2 cut(s) | 612, 855 |
| DpnI | GATC | 3 cut(s) | 173, 747, 752 |
| DpnII | GATC | 3 cut(s) | 171, 745, 750 |
| Eam1104I | CTCTTC | 2 cut(s) | 458, 677 |
| EarI | CTCTTC | 2 cut(s) | 458, 677 |
| Eco130I | CCWWGG | 4 cut(s) | 89, 471, 789, 802 |
| Eco47I | GGWCC | 2 cut(s) | 22, 126 |
| Eco72I | CACGTG | 1 cut(s) | 228 |
| EcoO109I | RGGNCCY | 1 cut(s) | 126 |
| EcoRII | CCWGG | 2 cut(s) | 478, 564 |
| EcoT14I | CCWWGG | 4 cut(s) | 89, 471, 789, 802 |
| EcoT22I | ATGCAT | 1 cut(s) | 843 |
| ErhI | CCWWGG | 4 cut(s) | 89, 471, 789, 802 |
| FaeI | CATG | 6 cut(s) | 164, 206, 237, 275, 793, 845 |
| FatI | CATG | 6 cut(s) | 160, 202, 233, 271, 789, 841 |
| Fnu4HI | GCNGC | 6 cut(s) | 494, 627, 630, 633, 698, 876 |
| FokI | GGATG | 4 cut(s) | 49, 360, 404, 547 |
| Fsp4HI | GCNGC | 6 cut(s) | 494, 627, 630, 633, 698, 876 |
| FspBI | CTAG | 5 cut(s) | 90, 540, 678, 762, 825 |
| GluI | GCNGC | 6 cut(s) | 494, 627, 630, 633, 698, 876 |
| GsuI | CTGGAG | 1 cut(s) | 198 |
| HaeIII | GGCC | 6 cut(s) | 88, 454, 585, 617, 669, 900 |
| Hin1II | CATG | 6 cut(s) | 164, 206, 237, 275, 793, 845 |
| HinfI | GANTC | 1 cut(s) | 908 |
| HphI | GGTGA | 5 cut(s) | 167, 197, 398, 494, 659 |
| Hpy166II | GTNNAC | 5 cut(s) | 69, 158, 211, 231, 830 |
| Hpy188I | TCNGA | 3 cut(s) | 750, 858, 913 |
| Hpy188III | TCNNGA | 2 cut(s) | 169, 577 |
| Hpy8I | GTNNAC | 5 cut(s) | 69, 158, 211, 231, 830 |
| HpyAV | CCTTC | 6 cut(s) | 42, 348, 444, 644, 687, 889 |
| HpyCH4III | ACNGT | 1 cut(s) | 152 |
| HpyCH4IV | ACGT | 1 cut(s) | 227 |
| HpyCH4V | TGCA | 7 cut(s) | 206, 237, 311, 422, 809, 841, 875 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 281, 308, 570, 623, 632, 641, 694, 884 |
| HpyF3I | CTNAG | 2 cut(s) | 612, 855 |
| HpySE526I | ACGT | 1 cut(s) | 227 |
| Hsp92II | CATG | 6 cut(s) | 164, 206, 237, 275, 793, 845 |
| Kzo9I | GATC | 3 cut(s) | 171, 745, 750 |
| LmnI | GCTCC | 2 cut(s) | 225, 299 |
| Lsp1109I | GCAGC | 6 cut(s) | 480, 638, 641, 644, 709, 887 |
| LweI | GCATC | 2 cut(s) | 324, 525 |
| MabI | ACCWGGT | 1 cut(s) | 478 |
| MaeI | CTAG | 5 cut(s) | 90, 540, 678, 762, 825 |
| MaeII | ACGT | 1 cut(s) | 227 |
| MaeIII | GTNAC | 1 cut(s) | 482 |
| MalI | GATC | 3 cut(s) | 173, 747, 752 |
| MboI | GATC | 3 cut(s) | 171, 745, 750 |
| MboII | GAAGA | 4 cut(s) | 475, 694, 787, 796 |
| MfeI | CAATTG | 1 cut(s) | 417 |
| MluCI | AATT | 2 cut(s) | 248, 417 |
| MmeI | TCCRAC | 4 cut(s) | 34, 740, 752, 875 |
| Mph1103I | ATGCAT | 1 cut(s) | 843 |
| MseI | TTAA | 2 cut(s) | 215, 251 |
| MslI | CAYNNNNRTG | 3 cut(s) | 17, 153, 554 |
| MspCI | CTTAAG | 1 cut(s) | 214 |
| MspR9I | CCNGG | 2 cut(s) | 480, 566 |
| MunI | CAATTG | 1 cut(s) | 417 |
| MvaI | CCWGG | 2 cut(s) | 480, 566 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 281, 308, 570, 623, 632, 641, 694, 884 |
| NcoI | CCATGG | 1 cut(s) | 789 |
| NdeII | GATC | 3 cut(s) | 171, 745, 750 |
| NlaIII | CATG | 6 cut(s) | 164, 206, 237, 275, 793, 845 |
| NlaIV | GGNNCC | 3 cut(s) | 221, 477, 705 |
| NmuCI | GTSAC | 1 cut(s) | 482 |
| NsiI | ATGCAT | 1 cut(s) | 843 |
| NspI | RCATGY | 2 cut(s) | 206, 237 |
| OliI | CACNNNNGTG | 1 cut(s) | 153 |
| PaeI | GCATGC | 1 cut(s) | 206 |
| PaqCI | CACCTGC | 1 cut(s) | 635 |
| PfeI | GAWTC | 1 cut(s) | 908 |
| PkrI | GCNGC | 6 cut(s) | 495, 628, 631, 634, 699, 877 |
| PmaCI | CACGTG | 1 cut(s) | 228 |
| PmlI | CACGTG | 1 cut(s) | 228 |
| Ppu21I | YACGTR | 1 cut(s) | 228 |
| PpuMI | RGGWCCY | 1 cut(s) | 126 |
| Psp5II | RGGWCCY | 1 cut(s) | 126 |
| Psp6I | CCWGG | 2 cut(s) | 478, 564 |
| PspCI | CACGTG | 1 cut(s) | 228 |
| PspGI | CCWGG | 2 cut(s) | 478, 564 |
| PspN4I | GGNNCC | 3 cut(s) | 221, 477, 705 |
| PspPI | GGNCC | 4 cut(s) | 22, 86, 126, 898 |
| PspPPI | RGGWCCY | 1 cut(s) | 126 |
| PstI | CTGCAG | 1 cut(s) | 877 |
| PstNI | CAGNNNCTG | 1 cut(s) | 308 |
| RsaI | GTAC | 1 cut(s) | 232 |
| RsaNI | GTAC | 1 cut(s) | 231 |
| RseI | CAYNNNNRTG | 3 cut(s) | 17, 153, 554 |
| SaqAI | TTAA | 2 cut(s) | 215, 251 |
| SatI | GCNGC | 6 cut(s) | 494, 627, 630, 633, 698, 876 |
| Sau3AI | GATC | 3 cut(s) | 171, 745, 750 |
| Sau96I | GGNCC | 4 cut(s) | 22, 86, 126, 898 |
| ScrFI | CCNGG | 2 cut(s) | 480, 566 |
| SexAI | ACCWGGT | 1 cut(s) | 478 |
| SfaNI | GCATC | 2 cut(s) | 324, 525 |
| SfcI | CTRYAG | 1 cut(s) | 873 |
| SinI | GGWCC | 2 cut(s) | 22, 126 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 17, 153, 554 |
| SmlI | CTYRAG | 1 cut(s) | 214 |
| SmoI | CTYRAG | 1 cut(s) | 214 |
| SphI | GCATGC | 1 cut(s) | 206 |
| Sse9I | AATT | 2 cut(s) | 248, 417 |
| SsiI | CCGC | 1 cut(s) | 735 |
| SspMI | CTAG | 5 cut(s) | 90, 540, 678, 762, 825 |
| StyD4I | CCNGG | 2 cut(s) | 478, 564 |
| StyI | CCWWGG | 4 cut(s) | 89, 471, 789, 802 |
| TaaI | ACNGT | 1 cut(s) | 152 |
| TaiI | ACGT | 1 cut(s) | 230 |
| TasI | AATT | 2 cut(s) | 248, 417 |
| TatI | WGTACW | 1 cut(s) | 230 |
| TfiI | GAWTC | 1 cut(s) | 908 |
| Tru1I | TTAA | 2 cut(s) | 215, 251 |
| Tru9I | TTAA | 2 cut(s) | 215, 251 |
| TscAI | CASTG | 3 cut(s) | 157, 181, 213 |
| TseFI | GTSAC | 1 cut(s) | 482 |
| TseI | GCWGC | 6 cut(s) | 493, 626, 629, 632, 697, 875 |
| Tsp45I | GTSAC | 1 cut(s) | 482 |
| TspDTI | ATGAA | 4 cut(s) | 260, 362, 476, 858 |
| TspRI | CASTG | 3 cut(s) | 157, 181, 213 |
| Vha464I | CTTAAG | 1 cut(s) | 214 |
| VpaK11BI | GGWCC | 2 cut(s) | 22, 126 |
| XceI | RCATGY | 2 cut(s) | 206, 237 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 809 |
| XmaJI | CCTAGG | 1 cut(s) | 89 |
| XspI | CTAG | 5 cut(s) | 90, 540, 678, 762, 825 |
| Zsp2I | ATGCAT | 1 cut(s) | 843 |