No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PB1-like | PF26130 | 20 - 123 | 2.4e-09 | PB1-like domain |
| DBD_Tnp_Mut | PF03108 | 554 - 613 | 3.7e-11 | MuDR family transposase |
| MULE | PF10551 | 749 - 845 | 4e-21 | MULE transposase domain |
| Transposase_mut | PF00872 | 765 - 847 | 9e-06 | Transposase, Mutator family |
| SWIM | PF04434 | 1002 - 1025 | 1.5e-06 | SWIM zinc finger |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3313 |
| Acc36I | ACCTGC | 3 cut(s) | 1886, 2782, 3313 |
| AccB1I | GGYRCC | 1 cut(s) | 3593 |
| AccI | GTMKAC | 2 cut(s) | 65, 3503 |
| AclWI | GGATC | 8 cut(s) | 173, 1950, 1972, 1985, 2130, 2143, 3049, 3062 |
| AcoI | YGGCCR | 2 cut(s) | 742, 3364 |
| AcsI | RAATTY | 4 cut(s) | 48, 977, 1687, 1759 |
| AcuI | CTGAAG | 1 cut(s) | 1536 |
| AfaI | GTAC | 7 cut(s) | 233, 711, 1476, 2003, 2195, 2599, 3574 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 287, 751, 1974, 2661, 3179, 3180, 3317, 3590 |
| AflIII | ACRYGT | 2 cut(s) | 2091, 3029 |
| AjnI | CCWGG | 7 cut(s) | 134, 869, 1967, 2131, 2284, 2654, 3274 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 275, 307 |
| Alw21I | GWGCWC | 2 cut(s) | 372, 2941 |
| Alw26I | GTCTC | 1 cut(s) | 2366 |
| Alw44I | GTGCAC | 1 cut(s) | 368 |
| AlwI | GGATC | 8 cut(s) | 173, 1950, 1972, 1985, 2130, 2143, 3049, 3062 |
| AoxI | GGCC | 9 cut(s) | 742, 857, 1113, 2240, 2560, 2697, 3150, 3364, 3405 |
| ApaLI | GTGCAC | 1 cut(s) | 368 |
| ApoI | RAATTY | 4 cut(s) | 48, 977, 1687, 1759 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2152, 2184 |
| AspA2I | CCTAGG | 2 cut(s) | 389, 2885 |
| AspS9I | GGNCC | 8 cut(s) | 35, 386, 671, 1965, 2168, 2697, 2882, 3581 |
| AsuHPI | GGTGA | 9 cut(s) | 343, 650, 844, 938, 1792, 1844, 1850, 2993, 3284 |
| AsuNHI | GCTAGC | 2 cut(s) | 512, 1817 |
| AvaII | GGWCC | 7 cut(s) | 35, 386, 671, 1965, 2168, 2882, 3581 |
| AvrII | CCTAGG | 2 cut(s) | 389, 2885 |
| BaeGI | GKGCMC | 1 cut(s) | 372 |
| BalI | TGGCCA | 1 cut(s) | 3366 |
| BamHI | GGATCC | 3 cut(s) | 1977, 2135, 3054 |
| BanI | GGYRCC | 1 cut(s) | 3593 |
| BanII | GRGCYC | 1 cut(s) | 1257 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 279, 311 |
| BbsI | GAAGAC | 1 cut(s) | 3253 |
| Bbv12I | GWGCWC | 2 cut(s) | 372, 2941 |
| BbvCI | CCTCAGC | 1 cut(s) | 1938 |
| BciT130I | CCWGG | 7 cut(s) | 136, 871, 1969, 2133, 2286, 2656, 3276 |
| BclI | TGATCA | 1 cut(s) | 2080 |
| BcoDI | GTCTC | 1 cut(s) | 2366 |
| BfmI | CTRYAG | 3 cut(s) | 1002, 1524, 2301 |
| BfuAI | ACCTGC | 3 cut(s) | 1886, 2782, 3313 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3413 |
| BglII | AGATCT | 1 cut(s) | 1645 |
| BlnI | CCTAGG | 2 cut(s) | 389, 2885 |
| BlpI | GCTNAGC | 3 cut(s) | 559, 1071, 2499 |
| BmcAI | AGTACT | 2 cut(s) | 2599, 3574 |
| Bme1390I | CCNGG | 7 cut(s) | 136, 871, 1969, 2133, 2286, 2656, 3276 |
| Bme18I | GGWCC | 7 cut(s) | 35, 386, 671, 1965, 2168, 2882, 3581 |
| BmgT120I | GGNCC | 8 cut(s) | 35, 386, 671, 1965, 2168, 2697, 2882, 3581 |
| BmrFI | CCNGG | 7 cut(s) | 136, 871, 1969, 2133, 2286, 2656, 3276 |
| BmrI | ACTGGG | 1 cut(s) | 2330 |
| BmsI | GCATC | 8 cut(s) | 307, 330, 1126, 2290, 2305, 2530, 2617, 2641 |
| BmtI | GCTAGC | 2 cut(s) | 516, 1821 |
| BmuI | ACTGGG | 1 cut(s) | 2330 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2676 |
| BpiI | GAAGAC | 1 cut(s) | 3253 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2547, 2579 |
| BpmI | CTGGAG | 1 cut(s) | 1869 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1272, 1938, 2120 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 559, 1071, 2499 |
| BpuEI | CTTGAG | 5 cut(s) | 1570, 1911, 2549, 2586, 2653 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1584, 2195 |
| BsaJI | CCNNGG | 6 cut(s) | 134, 269, 389, 1628, 1827, 2885 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 645, 675, 1867, 1897 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 287, 751, 1974, 2661, 3179, 3180, 3317, 3590 |
| Bse1I | ACTGG | 5 cut(s) | 517, 1507, 1886, 2336, 2983 |
| Bse3DI | GCAATG | 3 cut(s) | 422, 3174, 3213 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1584, 2195 |
| BseBI | CCWGG | 7 cut(s) | 136, 871, 1969, 2133, 2286, 2656, 3276 |
| BseDI | CCNNGG | 6 cut(s) | 134, 269, 389, 1628, 1827, 2885 |
| BseJI | GATNNNNATC | 2 cut(s) | 1584, 2195 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 287, 751, 1974, 2661, 3179, 3180, 3317, 3590 |
| BseMI | GCAATG | 3 cut(s) | 422, 3174, 3213 |
| BseMII | CTCAG | 6 cut(s) | 405, 573, 1062, 1110, 1929, 2490 |
| BseNI | ACTGG | 5 cut(s) | 517, 1507, 1886, 2336, 2983 |
| BseRI | GAGGAG | 3 cut(s) | 959, 1373, 1615 |
| BseSI | GKGCMC | 1 cut(s) | 372 |
| BseYI | CCCAGC | 2 cut(s) | 2464, 3335 |
| BsgI | GTGCAG | 4 cut(s) | 1218, 1677, 2042, 3474 |
| BshFI | GGCC | 9 cut(s) | 744, 859, 1115, 2242, 2562, 2699, 3152, 3366, 3407 |
| BshNI | GGYRCC | 1 cut(s) | 3593 |
| BsiHKAI | GWGCWC | 2 cut(s) | 372, 2941 |
| BslFI | GGGAC | 3 cut(s) | 1808, 3027, 3567 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 287, 751, 1974, 2661, 3179, 3180, 3317, 3590 |
| BsmAI | GTCTC | 1 cut(s) | 2366 |
| BsmFI | GGGAC | 3 cut(s) | 1808, 3027, 3567 |
| BsmI | GAATGC | 3 cut(s) | 880, 2587, 2842 |
| BsnI | GGCC | 9 cut(s) | 744, 859, 1115, 2242, 2562, 2699, 3152, 3366, 3407 |
| Bsp1286I | GDGCHC | 3 cut(s) | 372, 1257, 2941 |
| Bsp1407I | TGTACA | 1 cut(s) | 2193 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 559, 1071, 2499 |
| BspANI | GGCC | 9 cut(s) | 744, 859, 1115, 2242, 2562, 2699, 3152, 3366, 3407 |
| BspCNI | CTCAG | 6 cut(s) | 406, 572, 1063, 1111, 1930, 2491 |
| BspMAI | CTGCAG | 2 cut(s) | 1006, 2305 |
| BspMI | ACCTGC | 3 cut(s) | 1886, 2782, 3313 |
| BspOI | GCTAGC | 2 cut(s) | 516, 1821 |
| BspPI | GGATC | 8 cut(s) | 173, 1950, 1972, 1985, 2130, 2143, 3049, 3062 |
| BspT107I | GGYRCC | 1 cut(s) | 3593 |
| BsrDI | GCAATG | 3 cut(s) | 422, 3174, 3213 |
| BsrGI | TGTACA | 1 cut(s) | 2193 |
| BsrI | ACTGG | 5 cut(s) | 517, 1507, 1886, 2336, 2983 |
| BssECI | CCNNGG | 6 cut(s) | 134, 269, 389, 1628, 1827, 2885 |
| BssNAI | GTATAC | 1 cut(s) | 66 |
| BssT1I | CCWWGG | 4 cut(s) | 389, 1628, 1827, 2885 |
| Bst1107I | GTATAC | 1 cut(s) | 66 |
| Bst2UI | CCWGG | 7 cut(s) | 136, 871, 1969, 2133, 2286, 2656, 3276 |
| Bst4CI | ACNGT | 8 cut(s) | 367, 926, 1158, 1511, 1787, 1799, 2513, 3565 |
| Bst6I | CTCTTC | 7 cut(s) | 347, 902, 1118, 1172, 1482, 1563, 3254 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1136, 3077 |
| BstAUI | TGTACA | 1 cut(s) | 2193 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3315 |
| BstMAI | GTCTC | 1 cut(s) | 2366 |
| BstNI | CCWGG | 7 cut(s) | 136, 871, 1969, 2133, 2286, 2656, 3276 |
| BstNSI | RCATGY | 7 cut(s) | 738, 2095, 2214, 2859, 3002, 3033, 3071 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2676 |
| BstSCI | CCNGG | 7 cut(s) | 134, 869, 1967, 2131, 2284, 2654, 3274 |
| BstSFI | CTRYAG | 3 cut(s) | 1002, 1524, 2301 |
| BstSLI | GKGCMC | 1 cut(s) | 372 |
| BstV2I | GAAGAC | 1 cut(s) | 3253 |
| BstX2I | RGATCY | 6 cut(s) | 178, 1645, 1942, 1977, 2135, 3054 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 328, 2688 |
| BstYI | RGATCY | 6 cut(s) | 178, 1645, 1942, 1977, 2135, 3054 |
| BstZ17I | GTATAC | 1 cut(s) | 66 |
| BsuRI | GGCC | 9 cut(s) | 744, 859, 1115, 2242, 2562, 2699, 3152, 3366, 3407 |
| BtsI | GCAGTG | 2 cut(s) | 840, 1381 |
| BtsIMutI | CAGTG | 5 cut(s) | 840, 1381, 1500, 1859, 2509 |
| BveI | ACCTGC | 3 cut(s) | 1886, 2782, 3313 |
| Cfr13I | GGNCC | 8 cut(s) | 35, 386, 671, 1965, 2168, 2697, 2882, 3581 |
| Csp6I | GTAC | 7 cut(s) | 232, 710, 1475, 2002, 2194, 2598, 3573 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3343, 3378 |
| CviQI | GTAC | 7 cut(s) | 232, 710, 1475, 2002, 2194, 2598, 3573 |
| EaeI | YGGCCR | 2 cut(s) | 742, 3364 |
| Eam1104I | CTCTTC | 7 cut(s) | 347, 902, 1118, 1172, 1482, 1563, 3254 |
| EarI | CTCTTC | 7 cut(s) | 347, 902, 1118, 1172, 1482, 1563, 3254 |
| Eco130I | CCWWGG | 4 cut(s) | 389, 1628, 1827, 2885 |
| Eco147I | AGGCCT | 4 cut(s) | 1115, 2242, 2562, 3152 |
| Eco24I | GRGCYC | 1 cut(s) | 1257 |
| Eco47I | GGWCC | 7 cut(s) | 35, 386, 671, 1965, 2168, 2882, 3581 |
| Eco57I | CTGAAG | 1 cut(s) | 1536 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3315 |
| EcoO109I | RGGNCCY | 3 cut(s) | 386, 2697, 3581 |
| EcoRI | GAATTC | 1 cut(s) | 977 |
| EcoRII | CCWGG | 7 cut(s) | 134, 869, 1967, 2131, 2284, 2654, 3274 |
| EcoT14I | CCWWGG | 4 cut(s) | 389, 1628, 1827, 2885 |
| EcoT22I | ATGCAT | 2 cut(s) | 226, 1141 |
| EcoT38I | GRGCYC | 1 cut(s) | 1257 |
| ErhI | CCWWGG | 4 cut(s) | 389, 1628, 1827, 2885 |
| FaqI | GGGAC | 3 cut(s) | 1808, 3027, 3567 |
| FauNDI | CATATG | 3 cut(s) | 409, 792, 2344 |
| FbaI | TGATCA | 1 cut(s) | 2080 |
| FblI | GTMKAC | 2 cut(s) | 65, 3503 |
| FriOI | GRGCYC | 1 cut(s) | 1257 |
| GsaI | CCCAGC | 2 cut(s) | 2468, 3339 |
| GsuI | CTGGAG | 1 cut(s) | 1869 |
| HaeIII | GGCC | 9 cut(s) | 744, 859, 1115, 2242, 2562, 2699, 3152, 3366, 3407 |
| HincII | GTYRAC | 2 cut(s) | 3205, 3478 |
| HindII | GTYRAC | 2 cut(s) | 3205, 3478 |
| HindIII | AAGCTT | 1 cut(s) | 993 |
| HphI | GGTGA | 9 cut(s) | 343, 650, 844, 938, 1792, 1844, 1850, 2993, 3284 |
| HpyCH4III | ACNGT | 8 cut(s) | 367, 926, 1158, 1511, 1787, 1799, 2513, 3565 |
| HpyCH4IV | ACGT | 2 cut(s) | 2013, 3510 |
| HpySE526I | ACGT | 2 cut(s) | 2013, 3510 |
| KflI | GGGWCCC | 1 cut(s) | 3581 |
| Ksp22I | TGATCA | 1 cut(s) | 2080 |
| LmnI | GCTCC | 6 cut(s) | 1252, 2124, 2638, 3313, 3443, 3454 |
| LweI | GCATC | 8 cut(s) | 307, 330, 1126, 2290, 2305, 2530, 2617, 2641 |
| MaeII | ACGT | 2 cut(s) | 2013, 3510 |
| MaeIII | GTNAC | 4 cut(s) | 797, 1456, 2723, 3511 |
| MfeI | CAATTG | 2 cut(s) | 2142, 2475 |
| MflI | RGATCY | 6 cut(s) | 178, 1645, 1942, 1977, 2135, 3054 |
| MhlI | GDGCHC | 3 cut(s) | 372, 1257, 2941 |
| MlsI | TGGCCA | 1 cut(s) | 3366 |
| MluNI | TGGCCA | 1 cut(s) | 3366 |
| MlyI | GAGTC | 4 cut(s) | 997, 2686, 2759, 3009 |
| MmeI | TCCRAC | 2 cut(s) | 87, 2784 |
| Mox20I | TGGCCA | 1 cut(s) | 3366 |
| Mph1103I | ATGCAT | 2 cut(s) | 226, 1141 |
| MscI | TGGCCA | 1 cut(s) | 3366 |
| MseI | TTAA | 6 cut(s) | 141, 447, 470, 1700, 2757, 3342 |
| MslI | CAYNNNNRTG | 4 cut(s) | 326, 733, 2625, 2946 |
| Msp20I | TGGCCA | 1 cut(s) | 3366 |
| MspA1I | CMGCKG | 2 cut(s) | 44, 3488 |
| MspR9I | CCNGG | 7 cut(s) | 136, 871, 1969, 2133, 2286, 2656, 3276 |
| MunI | CAATTG | 2 cut(s) | 2142, 2475 |
| Mva1269I | GAATGC | 3 cut(s) | 880, 2587, 2842 |
| MvaI | CCWGG | 7 cut(s) | 136, 871, 1969, 2133, 2286, 2656, 3276 |
| NdeI | CATATG | 3 cut(s) | 409, 792, 2344 |
| NheI | GCTAGC | 2 cut(s) | 512, 1817 |
| NmeAIII | GCCGAG | 1 cut(s) | 1491 |
| NmuCI | GTSAC | 3 cut(s) | 1456, 2723, 3511 |
| NsiI | ATGCAT | 2 cut(s) | 226, 1141 |
| NspI | RCATGY | 7 cut(s) | 738, 2095, 2214, 2859, 3002, 3033, 3071 |
| PaeI | GCATGC | 3 cut(s) | 2214, 3002, 3071 |
| PaqCI | CACCTGC | 1 cut(s) | 3313 |
| PceI | AGGCCT | 4 cut(s) | 1115, 2242, 2562, 3152 |
| PciI | ACATGT | 2 cut(s) | 2091, 3029 |
| PctI | GAATGC | 3 cut(s) | 880, 2587, 2842 |
| PfeI | GAWTC | 7 cut(s) | 291, 1400, 1529, 1562, 1585, 2714, 3087 |
| PflFI | GACNNNGTC | 1 cut(s) | 675 |
| PfoI | TCCNGGA | 3 cut(s) | 1967, 2131, 2284 |
| PleI | GAGTC | 4 cut(s) | 996, 2685, 2758, 3009 |
| PpsI | GAGTC | 4 cut(s) | 996, 2685, 2758, 3009 |
| PpuMI | RGGWCCY | 2 cut(s) | 386, 3581 |
| PscI | ACATGT | 2 cut(s) | 2091, 3029 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2676 |
| Psp5II | RGGWCCY | 2 cut(s) | 386, 3581 |
| Psp6I | CCWGG | 7 cut(s) | 134, 869, 1967, 2131, 2284, 2654, 3274 |
| PspFI | CCCAGC | 2 cut(s) | 2464, 3335 |
| PspGI | CCWGG | 7 cut(s) | 134, 869, 1967, 2131, 2284, 2654, 3274 |
| PspPI | GGNCC | 8 cut(s) | 35, 386, 671, 1965, 2168, 2697, 2882, 3581 |
| PspPPI | RGGWCCY | 2 cut(s) | 386, 3581 |
| PstI | CTGCAG | 2 cut(s) | 1006, 2305 |
| PsuI | RGATCY | 6 cut(s) | 178, 1645, 1942, 1977, 2135, 3054 |
| PsyI | GACNNNGTC | 1 cut(s) | 675 |
| PvuII | CAGCTG | 2 cut(s) | 44, 3488 |
| RsaI | GTAC | 7 cut(s) | 233, 711, 1476, 2003, 2195, 2599, 3574 |
| RsaNI | GTAC | 7 cut(s) | 232, 710, 1475, 2002, 2194, 2598, 3573 |
| RseI | CAYNNNNRTG | 4 cut(s) | 326, 733, 2625, 2946 |
| SaqAI | TTAA | 6 cut(s) | 141, 447, 470, 1700, 2757, 3342 |
| Sau96I | GGNCC | 8 cut(s) | 35, 386, 671, 1965, 2168, 2697, 2882, 3581 |
| ScaI | AGTACT | 2 cut(s) | 2599, 3574 |
| SchI | GAGTC | 4 cut(s) | 997, 2686, 2759, 3009 |
| ScrFI | CCNGG | 7 cut(s) | 136, 871, 1969, 2133, 2286, 2656, 3276 |
| SduI | GDGCHC | 3 cut(s) | 372, 1257, 2941 |
| SfaNI | GCATC | 8 cut(s) | 307, 330, 1126, 2290, 2305, 2530, 2617, 2641 |
| SfcI | CTRYAG | 3 cut(s) | 1002, 1524, 2301 |
| SinI | GGWCC | 7 cut(s) | 35, 386, 671, 1965, 2168, 2882, 3581 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 326, 733, 2625, 2946 |
| SmlI | CTYRAG | 5 cut(s) | 1549, 1926, 2564, 2601, 2632 |
| SmoI | CTYRAG | 5 cut(s) | 1549, 1926, 2564, 2601, 2632 |
| SphI | GCATGC | 3 cut(s) | 2214, 3002, 3071 |
| SseBI | AGGCCT | 4 cut(s) | 1115, 2242, 2562, 3152 |
| SspI | AATATT | 2 cut(s) | 214, 631 |
| StuI | AGGCCT | 4 cut(s) | 1115, 2242, 2562, 3152 |
| StyD4I | CCNGG | 7 cut(s) | 134, 869, 1967, 2131, 2284, 2654, 3274 |
| StyI | CCWWGG | 4 cut(s) | 389, 1628, 1827, 2885 |
| TaaI | ACNGT | 8 cut(s) | 367, 926, 1158, 1511, 1787, 1799, 2513, 3565 |
| TaiI | ACGT | 2 cut(s) | 2016, 3513 |
| TatI | WGTACW | 4 cut(s) | 2001, 2193, 2597, 3572 |
| TfiI | GAWTC | 7 cut(s) | 291, 1400, 1529, 1562, 1585, 2714, 3087 |
| Tru1I | TTAA | 6 cut(s) | 141, 447, 470, 1700, 2757, 3342 |
| Tru9I | TTAA | 6 cut(s) | 141, 447, 470, 1700, 2757, 3342 |
| TscAI | CASTG | 5 cut(s) | 847, 1381, 1507, 1866, 2516 |
| TseFI | GTSAC | 3 cut(s) | 1456, 2723, 3511 |
| Tsp45I | GTSAC | 3 cut(s) | 1456, 2723, 3511 |
| TspRI | CASTG | 5 cut(s) | 847, 1381, 1507, 1866, 2516 |
| Tth111I | GACNNNGTC | 1 cut(s) | 675 |
| VneI | GTGCAC | 1 cut(s) | 368 |
| VpaK11BI | GGWCC | 7 cut(s) | 35, 386, 671, 1965, 2168, 2882, 3581 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3315 |
| XapI | RAATTY | 4 cut(s) | 48, 977, 1687, 1759 |
| XbaI | TCTAGA | 1 cut(s) | 175 |
| XceI | RCATGY | 7 cut(s) | 738, 2095, 2214, 2859, 3002, 3033, 3071 |
| XmaJI | CCTAGG | 2 cut(s) | 389, 2885 |
| XmiI | GTMKAC | 2 cut(s) | 65, 3503 |
| ZrmI | AGTACT | 2 cut(s) | 2599, 3574 |
| Zsp2I | ATGCAT | 2 cut(s) | 226, 1141 |