No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 902 |
| Acc36I | ACCTGC | 2 cut(s) | 902, 1431 |
| AccB1I | GGYRCC | 2 cut(s) | 508, 1464 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1659 |
| AccII | CGCG | 2 cut(s) | 25, 47 |
| AccIII | TCCGGA | 1 cut(s) | 52 |
| AciI | CCGC | 2 cut(s) | 23, 1250 |
| AclWI | GGATC | 4 cut(s) | 1009, 1325, 1631, 2038 |
| AcsI | RAATTY | 4 cut(s) | 32, 638, 745, 1088 |
| AcuI | CTGAAG | 3 cut(s) | 1348, 1436, 1982 |
| AfaI | GTAC | 3 cut(s) | 129, 627, 1743 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1659, 1863 |
| AflII | CTTAAG | 1 cut(s) | 697 |
| AflIII | ACRYGT | 1 cut(s) | 309 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 707 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 226, 258, 939, 971 |
| Alw21I | GWGCWC | 3 cut(s) | 1414, 1872, 1919 |
| Alw26I | GTCTC | 4 cut(s) | 13, 36, 281, 687 |
| AlwI | GGATC | 4 cut(s) | 1009, 1325, 1631, 2038 |
| Aor13HI | TCCGGA | 1 cut(s) | 52 |
| AoxI | GGCC | 2 cut(s) | 1251, 1646 |
| ApeKI | GCWGC | 9 cut(s) | 496, 521, 572, 1115, 1437, 1997, 2000, 2003, 2069 |
| ApoI | RAATTY | 4 cut(s) | 32, 638, 745, 1088 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 776, 808 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 552 |
| AspA2I | CCTAGG | 1 cut(s) | 1078 |
| AspLEI | GCGC | 2 cut(s) | 49, 572 |
| AspS9I | GGNCC | 3 cut(s) | 686, 1063, 1907 |
| AsuHPI | GGTGA | 3 cut(s) | 211, 854, 929 |
| AsuII | TTCGAA | 1 cut(s) | 36 |
| AsuNHI | GCTAGC | 1 cut(s) | 566 |
| AvaII | GGWCC | 3 cut(s) | 686, 1063, 1907 |
| AvrII | CCTAGG | 1 cut(s) | 1078 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1142, 1175 |
| BanI | GGYRCC | 2 cut(s) | 508, 1464 |
| BanII | GRGCYC | 2 cut(s) | 1672, 1872 |
| BbsI | GAAGAC | 1 cut(s) | 657 |
| Bbv12I | GWGCWC | 3 cut(s) | 1414, 1872, 1919 |
| BbvI | GCAGC | 9 cut(s) | 508, 533, 584, 1102, 1424, 2009, 2012, 2015, 2056 |
| BccI | CCATC | 4 cut(s) | 1001, 1454, 1555, 2216 |
| BceAI | ACGGC | 1 cut(s) | 48 |
| BciVI | GTATCC | 1 cut(s) | 1143 |
| BcoDI | GTCTC | 4 cut(s) | 13, 36, 281, 687 |
| BfmI | CTRYAG | 2 cut(s) | 1438, 1506 |
| BfrI | CTTAAG | 1 cut(s) | 697 |
| BfuAI | ACCTGC | 2 cut(s) | 902, 1431 |
| BfuI | GTATCC | 1 cut(s) | 1143 |
| BglII | AGATCT | 1 cut(s) | 2042 |
| BlnI | CCTAGG | 1 cut(s) | 1078 |
| Bme18I | GGWCC | 3 cut(s) | 686, 1063, 1907 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 707 |
| BmgT120I | GGNCC | 3 cut(s) | 686, 1063, 1907 |
| BmiI | GGNNCC | 4 cut(s) | 510, 1065, 1466, 1908 |
| BmsI | GCATC | 1 cut(s) | 1507 |
| BmtI | GCTAGC | 1 cut(s) | 570 |
| BpiI | GAAGAC | 1 cut(s) | 657 |
| Bpu14I | TTCGAA | 1 cut(s) | 36 |
| BpuEI | CTTGAG | 2 cut(s) | 546, 561 |
| BsaAI | YACGTR | 1 cut(s) | 131 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1397 |
| BsaI | GGTCTC | 1 cut(s) | 13 |
| BsaJI | CCNNGG | 2 cut(s) | 1078, 1254 |
| BsaWI | WCCGGW | 2 cut(s) | 52, 478 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 842, 872 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1659, 1863 |
| Bse1I | ACTGG | 3 cut(s) | 1154, 1664, 1910 |
| Bse3DI | GCAATG | 2 cut(s) | 124, 957 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1397 |
| BseAI | TCCGGA | 1 cut(s) | 52 |
| BseDI | CCNNGG | 2 cut(s) | 1078, 1254 |
| BseGI | GGATG | 6 cut(s) | 304, 409, 1398, 1522, 1630, 2155 |
| BseJI | GATNNNNATC | 1 cut(s) | 1397 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1659, 1863 |
| BseMI | GCAATG | 2 cut(s) | 124, 957 |
| BseMII | CTCAG | 3 cut(s) | 252, 732, 1026 |
| BseNI | ACTGG | 3 cut(s) | 1154, 1664, 1910 |
| BseRI | GAGGAG | 7 cut(s) | 410, 413, 485, 505, 900, 992, 1816 |
| BseXI | GCAGC | 9 cut(s) | 508, 533, 584, 1102, 1424, 2009, 2012, 2015, 2056 |
| BseYI | CCCAGC | 2 cut(s) | 500, 1578 |
| Bsh1236I | CGCG | 2 cut(s) | 25, 47 |
| BshFI | GGCC | 2 cut(s) | 1253, 1648 |
| BshNI | GGYRCC | 2 cut(s) | 508, 1464 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1414, 1872, 1919 |
| BsiSI | CCGG | 2 cut(s) | 53, 479 |
| BslFI | GGGAC | 2 cut(s) | 695, 1920 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1659, 1863 |
| BsmAI | GTCTC | 4 cut(s) | 13, 36, 281, 687 |
| BsmBI | CGTCTC | 1 cut(s) | 36 |
| BsmFI | GGGAC | 2 cut(s) | 695, 1920 |
| BsnI | GGCC | 2 cut(s) | 1253, 1648 |
| Bso31I | GGTCTC | 1 cut(s) | 13 |
| Bsp119I | TTCGAA | 1 cut(s) | 36 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1414, 1672, 1872, 1919 |
| Bsp13I | TCCGGA | 1 cut(s) | 52 |
| Bsp143I | GATC | 7 cut(s) | 355, 1001, 1330, 1636, 2030, 2042, 2213 |
| BspACI | CCGC | 2 cut(s) | 23, 1250 |
| BspANI | GGCC | 2 cut(s) | 1253, 1648 |
| BspCNI | CTCAG | 3 cut(s) | 253, 733, 1027 |
| BspEI | TCCGGA | 1 cut(s) | 52 |
| BspFNI | CGCG | 2 cut(s) | 25, 47 |
| BspHI | TCATGA | 1 cut(s) | 424 |
| BspLI | GGNNCC | 4 cut(s) | 510, 1065, 1466, 1908 |
| BspMAI | CTGCAG | 1 cut(s) | 1442 |
| BspMI | ACCTGC | 2 cut(s) | 902, 1431 |
| BspOI | GCTAGC | 1 cut(s) | 570 |
| BspPI | GGATC | 4 cut(s) | 1009, 1325, 1631, 2038 |
| BspQI | GCTCTTC | 1 cut(s) | 1318 |
| BspT104I | TTCGAA | 1 cut(s) | 36 |
| BspT107I | GGYRCC | 2 cut(s) | 508, 1464 |
| BspTI | CTTAAG | 1 cut(s) | 697 |
| BspTNI | GGTCTC | 1 cut(s) | 13 |
| BsrDI | GCAATG | 2 cut(s) | 124, 957 |
| BsrI | ACTGG | 3 cut(s) | 1154, 1664, 1910 |
| BssECI | CCNNGG | 2 cut(s) | 1078, 1254 |
| BssMI | GATC | 7 cut(s) | 355, 1001, 1330, 1636, 2030, 2042, 2213 |
| BssT1I | CCWWGG | 2 cut(s) | 1078, 1254 |
| Bst4CI | ACNGT | 3 cut(s) | 85, 219, 330 |
| Bst6I | CTCTTC | 3 cut(s) | 411, 1318, 1469 |
| BstAFI | CTTAAG | 1 cut(s) | 697 |
| BstBAI | YACGTR | 1 cut(s) | 131 |
| BstBI | TTCGAA | 1 cut(s) | 36 |
| BstC8I | GCNNGC | 2 cut(s) | 568, 1230 |
| BstDEI | CTNAG | 8 cut(s) | 261, 352, 731, 741, 1035, 1319, 1719, 1873 |
| BstF5I | GGATG | 6 cut(s) | 304, 409, 1398, 1522, 1630, 2155 |
| BstFNI | CGCG | 2 cut(s) | 25, 47 |
| BstHHI | GCGC | 2 cut(s) | 49, 572 |
| BstKTI | GATC | 7 cut(s) | 358, 1004, 1333, 1639, 2033, 2045, 2216 |
| BstMAI | GTCTC | 4 cut(s) | 13, 36, 281, 687 |
| BstMBI | GATC | 7 cut(s) | 355, 1001, 1330, 1636, 2030, 2042, 2213 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 572, 1238, 1247, 1256, 1654, 1994, 2003 |
| BstNSI | RCATGY | 2 cut(s) | 313, 632 |
| BstSFI | CTRYAG | 2 cut(s) | 1438, 1506 |
| BstUI | CGCG | 2 cut(s) | 25, 47 |
| BstV1I | GCAGC | 9 cut(s) | 508, 533, 584, 1102, 1424, 2009, 2012, 2015, 2056 |
| BstV2I | GAAGAC | 1 cut(s) | 657 |
| BstX2I | RGATCY | 2 cut(s) | 1001, 2042 |
| BstYI | RGATCY | 2 cut(s) | 1001, 2042 |
| BsuI | GTATCC | 1 cut(s) | 1143 |
| BsuRI | GGCC | 2 cut(s) | 1253, 1648 |
| BtsCI | GGATG | 6 cut(s) | 304, 409, 1398, 1522, 1630, 2155 |
| BtsIMutI | CAGTG | 5 cut(s) | 90, 1161, 1412, 1657, 1917 |
| BveI | ACCTGC | 2 cut(s) | 902, 1431 |
| Cac8I | GCNNGC | 2 cut(s) | 568, 1230 |
| CciI | TCATGA | 1 cut(s) | 424 |
| CfoI | GCGC | 2 cut(s) | 49, 572 |
| Cfr13I | GGNCC | 3 cut(s) | 686, 1063, 1907 |
| CseI | GACGC | 2 cut(s) | 53, 697 |
| Csp6I | GTAC | 3 cut(s) | 128, 626, 1742 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1127, 1162 |
| CviQI | GTAC | 3 cut(s) | 128, 626, 1742 |
| DdeI | CTNAG | 8 cut(s) | 261, 352, 731, 741, 1035, 1319, 1719, 1873 |
| DpnI | GATC | 7 cut(s) | 357, 1003, 1332, 1638, 2032, 2044, 2215 |
| DpnII | GATC | 7 cut(s) | 355, 1001, 1330, 1636, 2030, 2042, 2213 |
| DraI | TTTAAA | 2 cut(s) | 1429, 1980 |
| DriI | GACNNNNNGTC | 1 cut(s) | 707 |
| Eam1104I | CTCTTC | 3 cut(s) | 411, 1318, 1469 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 707 |
| EarI | CTCTTC | 3 cut(s) | 411, 1318, 1469 |
| Ecl136II | GAGCTC | 1 cut(s) | 1870 |
| Eco130I | CCWWGG | 2 cut(s) | 1078, 1254 |
| Eco147I | AGGCCT | 1 cut(s) | 1648 |
| Eco24I | GRGCYC | 2 cut(s) | 1672, 1872 |
| Eco31I | GGTCTC | 1 cut(s) | 13 |
| Eco47I | GGWCC | 3 cut(s) | 686, 1063, 1907 |
| Eco53kI | GAGCTC | 1 cut(s) | 1870 |
| Eco57I | CTGAAG | 3 cut(s) | 1348, 1436, 1982 |
| EcoICRI | GAGCTC | 1 cut(s) | 1870 |
| EcoRI | GAATTC | 1 cut(s) | 32 |
| EcoT14I | CCWWGG | 2 cut(s) | 1078, 1254 |
| EcoT22I | ATGCAT | 1 cut(s) | 1735 |
| EcoT38I | GRGCYC | 2 cut(s) | 1672, 1872 |
| ErhI | CCWWGG | 2 cut(s) | 1078, 1254 |
| Esp3I | CGTCTC | 1 cut(s) | 36 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 642, 674, 1346, 1378 |
| FaqI | GGGAC | 2 cut(s) | 695, 1920 |
| FokI | GGATG | 6 cut(s) | 311, 416, 1405, 1529, 1637, 2142 |
| FriOI | GRGCYC | 2 cut(s) | 1672, 1872 |
| GlaI | GCGC | 2 cut(s) | 48, 571 |
| GsaI | CCCAGC | 2 cut(s) | 504, 1582 |
| HaeIII | GGCC | 2 cut(s) | 1253, 1648 |
| HapII | CCGG | 2 cut(s) | 53, 479 |
| HgaI | GACGC | 2 cut(s) | 53, 697 |
| HhaI | GCGC | 2 cut(s) | 49, 572 |
| Hin6I | GCGC | 2 cut(s) | 47, 570 |
| HinP1I | GCGC | 2 cut(s) | 47, 570 |
| HincII | GTYRAC | 1 cut(s) | 967 |
| HindII | GTYRAC | 1 cut(s) | 967 |
| HinfI | GANTC | 6 cut(s) | 191, 211, 482, 926, 968, 2208 |
| HpaII | CCGG | 2 cut(s) | 53, 479 |
| HphI | GGTGA | 3 cut(s) | 211, 854, 929 |
| Hpy166II | GTNNAC | 2 cut(s) | 967, 2149 |
| Hpy188I | TCNGA | 6 cut(s) | 637, 769, 973, 1006, 1679, 2213 |
| Hpy8I | GTNNAC | 2 cut(s) | 967, 2149 |
| HpyAV | CCTTC | 8 cut(s) | 32, 130, 598, 1201, 1600, 1659, 1957, 2175 |
| HpyCH4III | ACNGT | 3 cut(s) | 85, 219, 330 |
| HpyCH4IV | ACGT | 1 cut(s) | 130 |
| HpyCH4V | TGCA | 7 cut(s) | 866, 911, 1094, 1292, 1440, 1733, 2048 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 572, 1238, 1247, 1256, 1654, 1994, 2003 |
| HpyF3I | CTNAG | 8 cut(s) | 261, 352, 731, 741, 1035, 1319, 1719, 1873 |
| HpySE526I | ACGT | 1 cut(s) | 130 |
| HspAI | GCGC | 2 cut(s) | 47, 570 |
| Kpn2I | TCCGGA | 1 cut(s) | 52 |
| Kzo9I | GATC | 7 cut(s) | 355, 1001, 1330, 1636, 2030, 2042, 2213 |
| LguI | GCTCTTC | 1 cut(s) | 1318 |
| LmnI | GCTCC | 3 cut(s) | 1282, 1409, 1867 |
| Lsp1109I | GCAGC | 9 cut(s) | 508, 533, 584, 1102, 1424, 2009, 2012, 2015, 2056 |
| LweI | GCATC | 1 cut(s) | 1507 |
| MaeII | ACGT | 1 cut(s) | 130 |
| MaeIII | GTNAC | 6 cut(s) | 65, 474, 725, 1358, 1494, 2092 |
| MalI | GATC | 7 cut(s) | 357, 1003, 1332, 1638, 2032, 2044, 2215 |
| MboI | GATC | 7 cut(s) | 355, 1001, 1330, 1636, 2030, 2042, 2213 |
| MfeI | CAATTG | 2 cut(s) | 1344, 1761 |
| MflI | RGATCY | 2 cut(s) | 1001, 2042 |
| MhlI | GDGCHC | 4 cut(s) | 1414, 1672, 1872, 1919 |
| MlyI | GAGTC | 2 cut(s) | 935, 962 |
| MmeI | TCCRAC | 3 cut(s) | 1041, 1494, 1800 |
| Mph1103I | ATGCAT | 1 cut(s) | 1735 |
| MroI | TCCGGA | 1 cut(s) | 52 |
| MroXI | GAANNNNTTC | 1 cut(s) | 552 |
| MseI | TTAA | 5 cut(s) | 698, 861, 1428, 1791, 1979 |
| MspA1I | CMGCKG | 3 cut(s) | 524, 1199, 1505 |
| MspCI | CTTAAG | 1 cut(s) | 697 |
| MspI | CCGG | 2 cut(s) | 53, 479 |
| MunI | CAATTG | 2 cut(s) | 1344, 1761 |
| MvnI | CGCG | 2 cut(s) | 25, 47 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 572, 1238, 1247, 1256, 1654, 1994, 2003 |
| NdeII | GATC | 7 cut(s) | 355, 1001, 1330, 1636, 2030, 2042, 2213 |
| NheI | GCTAGC | 1 cut(s) | 566 |
| NlaIV | GGNNCC | 4 cut(s) | 510, 1065, 1466, 1908 |
| NmeAIII | GCCGAG | 1 cut(s) | 747 |
| NmuCI | GTSAC | 1 cut(s) | 1358 |
| NsiI | ATGCAT | 1 cut(s) | 1735 |
| NspI | RCATGY | 2 cut(s) | 313, 632 |
| NspV | TTCGAA | 1 cut(s) | 36 |
| PagI | TCATGA | 1 cut(s) | 424 |
| PaqCI | CACCTGC | 1 cut(s) | 902 |
| PceI | AGGCCT | 1 cut(s) | 1648 |
| PciI | ACATGT | 1 cut(s) | 309 |
| PciSI | GCTCTTC | 1 cut(s) | 1318 |
| PdmI | GAANNNNTTC | 1 cut(s) | 552 |
| PfeI | GAWTC | 4 cut(s) | 191, 211, 482, 2208 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1659 |
| PleI | GAGTC | 2 cut(s) | 934, 962 |
| PpsI | GAGTC | 2 cut(s) | 934, 962 |
| Ppu21I | YACGTR | 1 cut(s) | 131 |
| PscI | ACATGT | 1 cut(s) | 309 |
| Psp124BI | GAGCTC | 1 cut(s) | 1872 |
| PspFI | CCCAGC | 2 cut(s) | 500, 1578 |
| PspN4I | GGNNCC | 4 cut(s) | 510, 1065, 1466, 1908 |
| PspPI | GGNCC | 3 cut(s) | 686, 1063, 1907 |
| PstI | CTGCAG | 1 cut(s) | 1442 |
| PsuI | RGATCY | 2 cut(s) | 1001, 2042 |
| PvuII | CAGCTG | 3 cut(s) | 524, 1199, 1505 |
| RsaI | GTAC | 3 cut(s) | 129, 627, 1743 |
| RsaNI | GTAC | 3 cut(s) | 128, 626, 1742 |
| SacI | GAGCTC | 1 cut(s) | 1872 |
| SapI | GCTCTTC | 1 cut(s) | 1318 |
| SaqAI | TTAA | 5 cut(s) | 698, 861, 1428, 1791, 1979 |
| Sau3AI | GATC | 7 cut(s) | 355, 1001, 1330, 1636, 2030, 2042, 2213 |
| Sau96I | GGNCC | 3 cut(s) | 686, 1063, 1907 |
| SchI | GAGTC | 2 cut(s) | 935, 962 |
| SduI | GDGCHC | 4 cut(s) | 1414, 1672, 1872, 1919 |
| SfaNI | GCATC | 1 cut(s) | 1507 |
| SfcI | CTRYAG | 2 cut(s) | 1438, 1506 |
| SfuI | TTCGAA | 1 cut(s) | 36 |
| SinI | GGWCC | 3 cut(s) | 686, 1063, 1907 |
| SmlI | CTYRAG | 3 cut(s) | 561, 576, 697 |
| SmoI | CTYRAG | 3 cut(s) | 561, 576, 697 |
| SseBI | AGGCCT | 1 cut(s) | 1648 |
| SsiI | CCGC | 2 cut(s) | 23, 1250 |
| SstI | GAGCTC | 1 cut(s) | 1872 |
| StuI | AGGCCT | 1 cut(s) | 1648 |
| StyI | CCWWGG | 2 cut(s) | 1078, 1254 |
| TaaI | ACNGT | 3 cut(s) | 85, 219, 330 |
| TaiI | ACGT | 1 cut(s) | 133 |
| TaqI | TCGA | 2 cut(s) | 36, 488 |
| TatI | WGTACW | 1 cut(s) | 625 |
| TauI | GCSGC | 1 cut(s) | 1253 |
| TfiI | GAWTC | 4 cut(s) | 191, 211, 482, 2208 |
| Tru1I | TTAA | 5 cut(s) | 698, 861, 1428, 1791, 1979 |
| Tru9I | TTAA | 5 cut(s) | 698, 861, 1428, 1791, 1979 |
| TscAI | CASTG | 5 cut(s) | 90, 1161, 1419, 1664, 1917 |
| TseFI | GTSAC | 1 cut(s) | 1358 |
| TseI | GCWGC | 9 cut(s) | 496, 521, 572, 1115, 1437, 1997, 2000, 2003, 2069 |
| Tsp45I | GTSAC | 1 cut(s) | 1358 |
| TspRI | CASTG | 5 cut(s) | 90, 1161, 1419, 1664, 1917 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1659 |
| Vha464I | CTTAAG | 1 cut(s) | 697 |
| VpaK11BI | GGWCC | 3 cut(s) | 686, 1063, 1907 |
| XapI | RAATTY | 4 cut(s) | 32, 638, 745, 1088 |
| XbaI | TCTAGA | 2 cut(s) | 1456, 2174 |
| XceI | RCATGY | 2 cut(s) | 313, 632 |
| XmaJI | CCTAGG | 1 cut(s) | 1078 |
| XmnI | GAANNNNTTC | 1 cut(s) | 552 |
| Zsp2I | ATGCAT | 1 cut(s) | 1735 |