No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PB1-like | PF26130 | 23 - 123 | 3.5e-09 | PB1-like domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 691 |
| AciI | CCGC | 1 cut(s) | 1677 |
| AclWI | GGATC | 4 cut(s) | 167, 225, 422, 1499 |
| AcsI | RAATTY | 2 cut(s) | 153, 1699 |
| AcuI | CTGAAG | 9 cut(s) | 362, 423, 795, 893, 903, 915, 1122, 1155, 1539 |
| AcyI | GRCGYC | 1 cut(s) | 1674 |
| AfaI | GTAC | 2 cut(s) | 119, 667 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 530, 860, 991, 1683 |
| AflIII | ACRYGT | 1 cut(s) | 838 |
| AhlI | ACTAGT | 1 cut(s) | 707 |
| AleI | CACNNNNGTG | 1 cut(s) | 78 |
| Alw26I | GTCTC | 3 cut(s) | 34, 412, 1381 |
| AlwI | GGATC | 4 cut(s) | 167, 225, 422, 1499 |
| AoxI | GGCC | 8 cut(s) | 521, 851, 1004, 1079, 1109, 1142, 1175, 1266 |
| ApeKI | GCWGC | 8 cut(s) | 464, 649, 1040, 1067, 1163, 1196, 1328, 1367 |
| ApoI | RAATTY | 2 cut(s) | 153, 1699 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1152, 1185 |
| AspA2I | CCTAGG | 2 cut(s) | 263, 827 |
| AspS9I | GGNCC | 2 cut(s) | 35, 982 |
| AsuHPI | GGTGA | 4 cut(s) | 337, 578, 1016, 1043 |
| AvaII | GGWCC | 2 cut(s) | 35, 982 |
| AvrII | CCTAGG | 2 cut(s) | 263, 827 |
| BaeGI | GKGCMC | 1 cut(s) | 696 |
| BanI | GGYRCC | 1 cut(s) | 691 |
| BanII | GRGCYC | 1 cut(s) | 827 |
| BbsI | GAAGAC | 3 cut(s) | 350, 355, 1677 |
| BbvI | GCAGC | 8 cut(s) | 476, 661, 1052, 1079, 1175, 1208, 1315, 1354 |
| BccI | CCATC | 8 cut(s) | 98, 137, 158, 577, 590, 626, 713, 1604 |
| BceAI | ACGGC | 1 cut(s) | 838 |
| BciVI | GTATCC | 1 cut(s) | 218 |
| BcoDI | GTCTC | 3 cut(s) | 34, 412, 1381 |
| BcuI | ACTAGT | 1 cut(s) | 707 |
| BfaI | CTAG | 8 cut(s) | 161, 170, 221, 264, 546, 708, 828, 908 |
| BfmI | CTRYAG | 2 cut(s) | 972, 1083 |
| BfuI | GTATCC | 1 cut(s) | 218 |
| BglII | AGATCT | 1 cut(s) | 904 |
| BisI | GCNGC | 9 cut(s) | 465, 650, 1041, 1068, 1164, 1197, 1329, 1368, 1677 |
| BlnI | CCTAGG | 2 cut(s) | 263, 827 |
| BlsI | GCNGC | 9 cut(s) | 466, 651, 1042, 1069, 1165, 1198, 1330, 1369, 1678 |
| Bme18I | GGWCC | 2 cut(s) | 35, 982 |
| BmgT120I | GGNCC | 2 cut(s) | 35, 982 |
| BmiI | GGNNCC | 2 cut(s) | 693, 824 |
| BmsI | GCATC | 9 cut(s) | 87, 279, 295, 301, 481, 950, 1246, 1301, 1340 |
| BpiI | GAAGAC | 3 cut(s) | 350, 355, 1677 |
| BpmI | CTGGAG | 1 cut(s) | 1380 |
| BpuEI | CTTGAG | 3 cut(s) | 921, 1447, 1652 |
| BsaHI | GRCGYC | 1 cut(s) | 1674 |
| BsaI | GGTCTC | 1 cut(s) | 412 |
| BsaJI | CCNNGG | 5 cut(s) | 76, 263, 827, 854, 1172 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1237, 1267, 1391, 1421 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 530, 860, 991, 1683 |
| Bse1I | ACTGG | 5 cut(s) | 376, 1118, 1151, 1184, 1531 |
| BseDI | CCNNGG | 5 cut(s) | 76, 263, 827, 854, 1172 |
| BseGI | GGATG | 7 cut(s) | 148, 294, 415, 462, 637, 1292, 1331 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 530, 860, 991, 1683 |
| BseMII | CTCAG | 4 cut(s) | 630, 951, 1251, 1509 |
| BseNI | ACTGG | 5 cut(s) | 376, 1118, 1151, 1184, 1531 |
| BseRI | GAGGAG | 4 cut(s) | 400, 659, 780, 1377 |
| BseSI | GKGCMC | 1 cut(s) | 696 |
| BseXI | GCAGC | 8 cut(s) | 476, 661, 1052, 1079, 1175, 1208, 1315, 1354 |
| BshFI | GGCC | 8 cut(s) | 523, 853, 1006, 1081, 1111, 1144, 1177, 1268 |
| BshNI | GGYRCC | 1 cut(s) | 691 |
| BslFI | GGGAC | 2 cut(s) | 901, 1633 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 530, 860, 991, 1683 |
| BsmAI | GTCTC | 3 cut(s) | 34, 412, 1381 |
| BsmBI | CGTCTC | 1 cut(s) | 34 |
| BsmFI | GGGAC | 2 cut(s) | 901, 1633 |
| BsmI | GAATGC | 1 cut(s) | 1604 |
| BsnI | GGCC | 8 cut(s) | 523, 853, 1006, 1081, 1111, 1144, 1177, 1268 |
| Bso31I | GGTCTC | 1 cut(s) | 412 |
| Bsp1286I | GDGCHC | 2 cut(s) | 696, 827 |
| Bsp143I | GATC | 6 cut(s) | 172, 217, 427, 904, 988, 1504 |
| Bsp19I | CCATGG | 1 cut(s) | 76 |
| BspACI | CCGC | 1 cut(s) | 1677 |
| BspANI | GGCC | 8 cut(s) | 523, 853, 1006, 1081, 1111, 1144, 1177, 1268 |
| BspCNI | CTCAG | 4 cut(s) | 629, 952, 1252, 1508 |
| BspLI | GGNNCC | 2 cut(s) | 693, 824 |
| BspMAI | CTGCAG | 1 cut(s) | 1087 |
| BspPI | GGATC | 4 cut(s) | 167, 225, 422, 1499 |
| BspT107I | GGYRCC | 1 cut(s) | 691 |
| BspTNI | GGTCTC | 1 cut(s) | 412 |
| BsrI | ACTGG | 5 cut(s) | 376, 1118, 1151, 1184, 1531 |
| BssECI | CCNNGG | 5 cut(s) | 76, 263, 827, 854, 1172 |
| BssMI | GATC | 6 cut(s) | 172, 217, 427, 904, 988, 1504 |
| BssNI | GRCGYC | 1 cut(s) | 1674 |
| BssT1I | CCWWGG | 4 cut(s) | 76, 263, 827, 1172 |
| Bst4CI | ACNGT | 1 cut(s) | 1457 |
| Bst6I | CTCTTC | 5 cut(s) | 399, 842, 1204, 1443, 1563 |
| BstACI | GRCGYC | 1 cut(s) | 1674 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1082 |
| BstC8I | GCNNGC | 2 cut(s) | 654, 1083 |
| BstDEI | CTNAG | 5 cut(s) | 616, 680, 960, 1260, 1495 |
| BstDSI | CCRYGG | 2 cut(s) | 76, 854 |
| BstF5I | GGATG | 7 cut(s) | 148, 294, 415, 462, 637, 1292, 1331 |
| BstKTI | GATC | 6 cut(s) | 175, 220, 430, 907, 991, 1507 |
| BstMAI | GTCTC | 3 cut(s) | 34, 412, 1381 |
| BstMBI | GATC | 6 cut(s) | 172, 217, 427, 904, 988, 1504 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 473, 520, 938, 1046, 1073, 1082, 1265, 1325, 1364 |
| BstNSI | RCATGY | 1 cut(s) | 842 |
| BstSFI | CTRYAG | 2 cut(s) | 972, 1083 |
| BstSLI | GKGCMC | 1 cut(s) | 696 |
| BstV1I | GCAGC | 8 cut(s) | 476, 661, 1052, 1079, 1175, 1208, 1315, 1354 |
| BstV2I | GAAGAC | 3 cut(s) | 350, 355, 1677 |
| BstX2I | RGATCY | 3 cut(s) | 172, 217, 904 |
| BstYI | RGATCY | 3 cut(s) | 172, 217, 904 |
| BsuI | GTATCC | 1 cut(s) | 218 |
| BsuRI | GGCC | 8 cut(s) | 523, 853, 1006, 1081, 1111, 1144, 1177, 1268 |
| BtgI | CCRYGG | 2 cut(s) | 76, 854 |
| BtgZI | GCGATG | 1 cut(s) | 291 |
| BtsCI | GGATG | 7 cut(s) | 148, 294, 415, 462, 637, 1292, 1331 |
| BtsI | GCAGTG | 1 cut(s) | 1609 |
| BtsIMutI | CAGTG | 2 cut(s) | 1462, 1609 |
| Cac8I | GCNNGC | 2 cut(s) | 654, 1083 |
| Cfr13I | GGNCC | 2 cut(s) | 35, 982 |
| CseI | GACGC | 3 cut(s) | 51, 1359, 1682 |
| Csp6I | GTAC | 2 cut(s) | 118, 666 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 127, 162 |
| CviAII | CATG | 5 cut(s) | 77, 189, 213, 730, 839 |
| CviQI | GTAC | 2 cut(s) | 118, 666 |
| DdeI | CTNAG | 5 cut(s) | 616, 680, 960, 1260, 1495 |
| DpnI | GATC | 6 cut(s) | 174, 219, 429, 906, 990, 1506 |
| DpnII | GATC | 6 cut(s) | 172, 217, 427, 904, 988, 1504 |
| Eam1104I | CTCTTC | 5 cut(s) | 399, 842, 1204, 1443, 1563 |
| EarI | CTCTTC | 5 cut(s) | 399, 842, 1204, 1443, 1563 |
| Eco130I | CCWWGG | 4 cut(s) | 76, 263, 827, 1172 |
| Eco147I | AGGCCT | 4 cut(s) | 1081, 1111, 1144, 1177 |
| Eco24I | GRGCYC | 1 cut(s) | 827 |
| Eco31I | GGTCTC | 1 cut(s) | 412 |
| Eco47I | GGWCC | 2 cut(s) | 35, 982 |
| Eco57I | CTGAAG | 9 cut(s) | 362, 423, 795, 893, 903, 915, 1122, 1155, 1539 |
| EcoT14I | CCWWGG | 4 cut(s) | 76, 263, 827, 1172 |
| EcoT38I | GRGCYC | 1 cut(s) | 827 |
| ErhI | CCWWGG | 4 cut(s) | 76, 263, 827, 1172 |
| Esp3I | CGTCTC | 1 cut(s) | 34 |
| FaeI | CATG | 5 cut(s) | 80, 192, 216, 733, 842 |
| FaqI | GGGAC | 2 cut(s) | 901, 1633 |
| FatI | CATG | 5 cut(s) | 76, 188, 212, 729, 838 |
| Fnu4HI | GCNGC | 9 cut(s) | 465, 650, 1041, 1068, 1164, 1197, 1329, 1368, 1677 |
| FokI | GGATG | 7 cut(s) | 155, 301, 422, 469, 644, 1279, 1318 |
| FriOI | GRGCYC | 1 cut(s) | 827 |
| Fsp4HI | GCNGC | 9 cut(s) | 465, 650, 1041, 1068, 1164, 1197, 1329, 1368, 1677 |
| FspBI | CTAG | 8 cut(s) | 161, 170, 221, 264, 546, 708, 828, 908 |
| GluI | GCNGC | 9 cut(s) | 465, 650, 1041, 1068, 1164, 1197, 1329, 1368, 1677 |
| GsuI | CTGGAG | 1 cut(s) | 1380 |
| HaeIII | GGCC | 8 cut(s) | 523, 853, 1006, 1081, 1111, 1144, 1177, 1268 |
| HgaI | GACGC | 3 cut(s) | 51, 1359, 1682 |
| Hin1I | GRCGYC | 1 cut(s) | 1674 |
| Hin1II | CATG | 5 cut(s) | 80, 192, 216, 733, 842 |
| HindIII | AAGCTT | 1 cut(s) | 329 |
| HinfI | GANTC | 6 cut(s) | 29, 442, 614, 1460, 1493, 1514 |
| HphI | GGTGA | 4 cut(s) | 337, 578, 1016, 1043 |
| Hpy166II | GTNNAC | 1 cut(s) | 705 |
| Hpy188III | TCNNGA | 8 cut(s) | 33, 60, 170, 176, 431, 1157, 1470, 1650 |
| Hpy8I | GTNNAC | 1 cut(s) | 705 |
| HpyCH4III | ACNGT | 1 cut(s) | 1457 |
| HpyCH4V | TGCA | 6 cut(s) | 188, 314, 1085, 1292, 1331, 1602 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 473, 520, 938, 1046, 1073, 1082, 1265, 1325, 1364 |
| HpyF3I | CTNAG | 5 cut(s) | 616, 680, 960, 1260, 1495 |
| Hsp92I | GRCGYC | 1 cut(s) | 1674 |
| Hsp92II | CATG | 5 cut(s) | 80, 192, 216, 733, 842 |
| Kzo9I | GATC | 6 cut(s) | 172, 217, 427, 904, 988, 1504 |
| LmnI | GCTCC | 4 cut(s) | 646, 822, 1233, 1364 |
| Lsp1109I | GCAGC | 8 cut(s) | 476, 661, 1052, 1079, 1175, 1208, 1315, 1354 |
| LweI | GCATC | 9 cut(s) | 87, 279, 295, 301, 481, 950, 1246, 1301, 1340 |
| MaeI | CTAG | 8 cut(s) | 161, 170, 221, 264, 546, 708, 828, 908 |
| MaeIII | GTNAC | 4 cut(s) | 683, 725, 749, 1457 |
| MalI | GATC | 6 cut(s) | 174, 219, 429, 906, 990, 1506 |
| MboI | GATC | 6 cut(s) | 172, 217, 427, 904, 988, 1504 |
| MfeI | CAATTG | 2 cut(s) | 1008, 1056 |
| MflI | RGATCY | 3 cut(s) | 172, 217, 904 |
| MhlI | GDGCHC | 2 cut(s) | 696, 827 |
| MluCI | AATT | 9 cut(s) | 55, 153, 607, 745, 947, 1008, 1056, 1693, 1699 |
| MlyI | GAGTC | 3 cut(s) | 608, 1454, 1487 |
| MmeI | TCCRAC | 1 cut(s) | 266 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1152, 1185 |
| MseI | TTAA | 5 cut(s) | 450, 555, 672, 920, 1692 |
| MslI | CAYNNNNRTG | 1 cut(s) | 78 |
| MspA1I | CMGCKG | 4 cut(s) | 1133, 1166, 1199, 1328 |
| MunI | CAATTG | 2 cut(s) | 1008, 1056 |
| Mva1269I | GAATGC | 1 cut(s) | 1604 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 473, 520, 938, 1046, 1073, 1082, 1265, 1325, 1364 |
| NcoI | CCATGG | 1 cut(s) | 76 |
| NdeII | GATC | 6 cut(s) | 172, 217, 427, 904, 988, 1504 |
| NlaIII | CATG | 5 cut(s) | 80, 192, 216, 733, 842 |
| NlaIV | GGNNCC | 2 cut(s) | 693, 824 |
| NmuCI | GTSAC | 3 cut(s) | 683, 725, 1457 |
| NspI | RCATGY | 1 cut(s) | 842 |
| OliI | CACNNNNGTG | 1 cut(s) | 78 |
| PceI | AGGCCT | 4 cut(s) | 1081, 1111, 1144, 1177 |
| PciI | ACATGT | 1 cut(s) | 838 |
| PctI | GAATGC | 1 cut(s) | 1604 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1152, 1185 |
| PfeI | GAWTC | 3 cut(s) | 29, 442, 1514 |
| PkrI | GCNGC | 9 cut(s) | 466, 651, 1042, 1069, 1165, 1198, 1330, 1369, 1678 |
| PleI | GAGTC | 3 cut(s) | 608, 1454, 1487 |
| PpsI | GAGTC | 3 cut(s) | 608, 1454, 1487 |
| PscI | ACATGT | 1 cut(s) | 838 |
| PspN4I | GGNNCC | 2 cut(s) | 693, 824 |
| PspPI | GGNCC | 2 cut(s) | 35, 982 |
| PstI | CTGCAG | 1 cut(s) | 1087 |
| PsuI | RGATCY | 3 cut(s) | 172, 217, 904 |
| PvuII | CAGCTG | 4 cut(s) | 1133, 1166, 1199, 1328 |
| RsaI | GTAC | 2 cut(s) | 119, 667 |
| RsaNI | GTAC | 2 cut(s) | 118, 666 |
| RseI | CAYNNNNRTG | 1 cut(s) | 78 |
| SaqAI | TTAA | 5 cut(s) | 450, 555, 672, 920, 1692 |
| SatI | GCNGC | 9 cut(s) | 465, 650, 1041, 1068, 1164, 1197, 1329, 1368, 1677 |
| Sau3AI | GATC | 6 cut(s) | 172, 217, 427, 904, 988, 1504 |
| Sau96I | GGNCC | 2 cut(s) | 35, 982 |
| SchI | GAGTC | 3 cut(s) | 608, 1454, 1487 |
| SduI | GDGCHC | 2 cut(s) | 696, 827 |
| SfaNI | GCATC | 9 cut(s) | 87, 279, 295, 301, 481, 950, 1246, 1301, 1340 |
| SfcI | CTRYAG | 2 cut(s) | 972, 1083 |
| SinI | GGWCC | 2 cut(s) | 35, 982 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 78 |
| SmlI | CTYRAG | 3 cut(s) | 936, 1462, 1631 |
| SmoI | CTYRAG | 3 cut(s) | 936, 1462, 1631 |
| SpeI | ACTAGT | 1 cut(s) | 707 |
| Sse9I | AATT | 9 cut(s) | 55, 153, 607, 745, 947, 1008, 1056, 1693, 1699 |
| SseBI | AGGCCT | 4 cut(s) | 1081, 1111, 1144, 1177 |
| SsiI | CCGC | 1 cut(s) | 1677 |
| SspMI | CTAG | 8 cut(s) | 161, 170, 221, 264, 546, 708, 828, 908 |
| StuI | AGGCCT | 4 cut(s) | 1081, 1111, 1144, 1177 |
| StyI | CCWWGG | 4 cut(s) | 76, 263, 827, 1172 |
| TaaI | ACNGT | 1 cut(s) | 1457 |
| TaqII | GACCGA | 1 cut(s) | 52 |
| TasI | AATT | 9 cut(s) | 55, 153, 607, 745, 947, 1008, 1056, 1693, 1699 |
| TatI | WGTACW | 1 cut(s) | 117 |
| TauI | GCSGC | 1 cut(s) | 1679 |
| TfiI | GAWTC | 3 cut(s) | 29, 442, 1514 |
| Tru1I | TTAA | 5 cut(s) | 450, 555, 672, 920, 1692 |
| Tru9I | TTAA | 5 cut(s) | 450, 555, 672, 920, 1692 |
| TscAI | CASTG | 2 cut(s) | 1462, 1609 |
| TseFI | GTSAC | 3 cut(s) | 683, 725, 1457 |
| TseI | GCWGC | 8 cut(s) | 464, 649, 1040, 1067, 1163, 1196, 1328, 1367 |
| Tsp45I | GTSAC | 3 cut(s) | 683, 725, 1457 |
| TspDTI | ATGAA | 3 cut(s) | 355, 805, 1680 |
| TspRI | CASTG | 2 cut(s) | 1462, 1609 |
| VpaK11BI | GGWCC | 2 cut(s) | 35, 982 |
| XapI | RAATTY | 2 cut(s) | 153, 1699 |
| XbaI | TCTAGA | 1 cut(s) | 169 |
| XceI | RCATGY | 1 cut(s) | 842 |
| XmaJI | CCTAGG | 2 cut(s) | 263, 827 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1152, 1185 |
| XspI | CTAG | 8 cut(s) | 161, 170, 221, 264, 546, 708, 828, 908 |