No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| SWIM | PF04434 | 163 - 189 | 3.2e-08 | SWIM zinc finger |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 481 |
| AclWI | GGATC | 4 cut(s) | 538, 551, 641, 649 |
| AcoI | YGGCCR | 1 cut(s) | 333 |
| AfaI | GTAC | 3 cut(s) | 421, 458, 465 |
| AflIII | ACRYGT | 1 cut(s) | 312 |
| AgsI | TTSAA | 8 cut(s) | 31, 47, 55, 391, 502, 637, 709, 717 |
| AjnI | CCWGG | 1 cut(s) | 733 |
| AleI | CACNNNNGTG | 1 cut(s) | 474 |
| AluBI | AGCT | 3 cut(s) | 35, 347, 629 |
| AluI | AGCT | 3 cut(s) | 35, 347, 629 |
| AlwI | GGATC | 4 cut(s) | 538, 551, 641, 649 |
| AoxI | GGCC | 3 cut(s) | 170, 333, 740 |
| ApeKI | GCWGC | 2 cut(s) | 77, 80 |
| AspS9I | GGNCC | 1 cut(s) | 377 |
| AsuHPI | GGTGA | 2 cut(s) | 458, 782 |
| AvaII | GGWCC | 1 cut(s) | 377 |
| BalI | TGGCCA | 1 cut(s) | 335 |
| BamHI | GGATCC | 1 cut(s) | 543 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 614, 646 |
| BbsI | GAAGAC | 1 cut(s) | 35 |
| BbvI | GCAGC | 2 cut(s) | 89, 92 |
| BccI | CCATC | 3 cut(s) | 325, 433, 522 |
| BciT130I | CCWGG | 1 cut(s) | 735 |
| BfaI | CTAG | 4 cut(s) | 299, 371, 461, 669 |
| BfmI | CTRYAG | 1 cut(s) | 765 |
| BglII | AGATCT | 1 cut(s) | 191 |
| BisI | GCNGC | 2 cut(s) | 78, 81 |
| BlsI | GCNGC | 2 cut(s) | 79, 82 |
| BmcAI | AGTACT | 1 cut(s) | 421 |
| Bme1390I | CCNGG | 1 cut(s) | 735 |
| Bme18I | GGWCC | 1 cut(s) | 377 |
| BmgT120I | GGNCC | 1 cut(s) | 377 |
| BmiI | GGNNCC | 1 cut(s) | 545 |
| BmrFI | CCNGG | 1 cut(s) | 735 |
| BmsI | GCATC | 1 cut(s) | 376 |
| BpiI | GAAGAC | 1 cut(s) | 35 |
| Bpu10I | CCTNAGC | 1 cut(s) | 326 |
| BsaJI | CCNNGG | 2 cut(s) | 101, 380 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 623, 653 |
| BseBI | CCWGG | 1 cut(s) | 735 |
| BseDI | CCNNGG | 2 cut(s) | 101, 380 |
| BseGI | GGATG | 1 cut(s) | 336 |
| BseXI | GCAGC | 2 cut(s) | 89, 92 |
| BshFI | GGCC | 3 cut(s) | 172, 335, 742 |
| BslFI | GGGAC | 1 cut(s) | 306 |
| BsmFI | GGGAC | 1 cut(s) | 306 |
| BsnI | GGCC | 3 cut(s) | 172, 335, 742 |
| Bsp143I | GATC | 4 cut(s) | 191, 543, 646, 654 |
| Bsp19I | CCATGG | 1 cut(s) | 101 |
| BspANI | GGCC | 3 cut(s) | 172, 335, 742 |
| BspLI | GGNNCC | 1 cut(s) | 545 |
| BspPI | GGATC | 4 cut(s) | 538, 551, 641, 649 |
| BssECI | CCNNGG | 2 cut(s) | 101, 380 |
| BssMI | GATC | 4 cut(s) | 191, 543, 646, 654 |
| BssT1I | CCWWGG | 2 cut(s) | 101, 380 |
| Bst2UI | CCWGG | 1 cut(s) | 735 |
| Bst4CI | ACNGT | 1 cut(s) | 97 |
| Bst6I | CTCTTC | 1 cut(s) | 108 |
| BstC8I | GCNNGC | 2 cut(s) | 174, 740 |
| BstDEI | CTNAG | 2 cut(s) | 326, 435 |
| BstDSI | CCRYGG | 1 cut(s) | 101 |
| BstF5I | GGATG | 1 cut(s) | 336 |
| BstKTI | GATC | 4 cut(s) | 194, 546, 649, 657 |
| BstMBI | GATC | 4 cut(s) | 191, 543, 646, 654 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 86 |
| BstNI | CCWGG | 1 cut(s) | 735 |
| BstNSI | RCATGY | 2 cut(s) | 316, 560 |
| BstSCI | CCNGG | 1 cut(s) | 733 |
| BstSFI | CTRYAG | 1 cut(s) | 765 |
| BstV1I | GCAGC | 2 cut(s) | 89, 92 |
| BstV2I | GAAGAC | 1 cut(s) | 35 |
| BstX2I | RGATCY | 2 cut(s) | 191, 543 |
| BstYI | RGATCY | 2 cut(s) | 191, 543 |
| BsuRI | GGCC | 3 cut(s) | 172, 335, 742 |
| BtgI | CCRYGG | 1 cut(s) | 101 |
| BtsCI | GGATG | 1 cut(s) | 336 |
| BtsIMutI | CAGTG | 1 cut(s) | 102 |
| Cac8I | GCNNGC | 2 cut(s) | 174, 740 |
| Cfr13I | GGNCC | 1 cut(s) | 377 |
| Csp6I | GTAC | 3 cut(s) | 420, 457, 464 |
| CviAII | CATG | 9 cut(s) | 102, 140, 150, 313, 322, 519, 549, 557, 608 |
| CviQI | GTAC | 3 cut(s) | 420, 457, 464 |
| DdeI | CTNAG | 2 cut(s) | 326, 435 |
| DpnI | GATC | 4 cut(s) | 193, 545, 648, 656 |
| DpnII | GATC | 4 cut(s) | 191, 543, 646, 654 |
| EaeI | YGGCCR | 1 cut(s) | 333 |
| Eam1104I | CTCTTC | 1 cut(s) | 108 |
| EarI | CTCTTC | 1 cut(s) | 108 |
| Eco130I | CCWWGG | 2 cut(s) | 101, 380 |
| Eco147I | AGGCCT | 1 cut(s) | 172 |
| Eco47I | GGWCC | 1 cut(s) | 377 |
| EcoRII | CCWGG | 1 cut(s) | 733 |
| EcoT14I | CCWWGG | 2 cut(s) | 101, 380 |
| ErhI | CCWWGG | 2 cut(s) | 101, 380 |
| FaeI | CATG | 9 cut(s) | 105, 143, 153, 316, 325, 522, 552, 560, 611 |
| FaqI | GGGAC | 1 cut(s) | 306 |
| FatI | CATG | 9 cut(s) | 101, 139, 149, 312, 321, 518, 548, 556, 607 |
| FblI | GTMKAC | 1 cut(s) | 481 |
| Fnu4HI | GCNGC | 2 cut(s) | 78, 81 |
| FokI | GGATG | 1 cut(s) | 343 |
| Fsp4HI | GCNGC | 2 cut(s) | 78, 81 |
| FspBI | CTAG | 4 cut(s) | 299, 371, 461, 669 |
| GluI | GCNGC | 2 cut(s) | 78, 81 |
| HaeIII | GGCC | 3 cut(s) | 172, 335, 742 |
| Hin1II | CATG | 9 cut(s) | 105, 143, 153, 316, 325, 522, 552, 560, 611 |
| HindIII | AAGCTT | 2 cut(s) | 33, 627 |
| HinfI | GANTC | 1 cut(s) | 506 |
| HphI | GGTGA | 2 cut(s) | 458, 782 |
| Hpy166II | GTNNAC | 3 cut(s) | 482, 510, 595 |
| Hpy188III | TCNNGA | 2 cut(s) | 299, 391 |
| Hpy8I | GTNNAC | 3 cut(s) | 482, 510, 595 |
| HpyAV | CCTTC | 4 cut(s) | 103, 496, 616, 723 |
| HpyCH4III | ACNGT | 1 cut(s) | 97 |
| HpyCH4V | TGCA | 2 cut(s) | 560, 723 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 86 |
| HpyF3I | CTNAG | 2 cut(s) | 326, 435 |
| Hsp92II | CATG | 9 cut(s) | 105, 143, 153, 316, 325, 522, 552, 560, 611 |
| Kzo9I | GATC | 4 cut(s) | 191, 543, 646, 654 |
| LpnPI | CCDG | 7 cut(s) | 24, 186, 429, 592, 720, 724, 747 |
| Lsp1109I | GCAGC | 2 cut(s) | 89, 92 |
| LweI | GCATC | 1 cut(s) | 376 |
| MaeI | CTAG | 4 cut(s) | 299, 371, 461, 669 |
| MalI | GATC | 4 cut(s) | 193, 545, 648, 656 |
| MboI | GATC | 4 cut(s) | 191, 543, 646, 654 |
| MboII | GAAGA | 2 cut(s) | 35, 125 |
| MfeI | CAATTG | 1 cut(s) | 561 |
| MflI | RGATCY | 2 cut(s) | 191, 543 |
| MlsI | TGGCCA | 1 cut(s) | 335 |
| MluCI | AATT | 7 cut(s) | 181, 253, 358, 396, 485, 561, 756 |
| MluNI | TGGCCA | 1 cut(s) | 335 |
| MlyI | GAGTC | 1 cut(s) | 515 |
| MnlI | CCTC | 2 cut(s) | 111, 348 |
| Mox20I | TGGCCA | 1 cut(s) | 335 |
| MscI | TGGCCA | 1 cut(s) | 335 |
| MseI | TTAA | 6 cut(s) | 162, 201, 231, 252, 698, 777 |
| MslI | CAYNNNNRTG | 3 cut(s) | 154, 311, 474 |
| Msp20I | TGGCCA | 1 cut(s) | 335 |
| MspR9I | CCNGG | 1 cut(s) | 735 |
| MunI | CAATTG | 1 cut(s) | 561 |
| MvaI | CCWGG | 1 cut(s) | 735 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 86 |
| NcoI | CCATGG | 1 cut(s) | 101 |
| NdeII | GATC | 4 cut(s) | 191, 543, 646, 654 |
| NlaIII | CATG | 9 cut(s) | 105, 143, 153, 316, 325, 522, 552, 560, 611 |
| NlaIV | GGNNCC | 1 cut(s) | 545 |
| NspI | RCATGY | 2 cut(s) | 316, 560 |
| OliI | CACNNNNGTG | 1 cut(s) | 474 |
| PceI | AGGCCT | 1 cut(s) | 172 |
| PciI | ACATGT | 1 cut(s) | 312 |
| PkrI | GCNGC | 2 cut(s) | 79, 82 |
| PleI | GAGTC | 1 cut(s) | 514 |
| PpsI | GAGTC | 1 cut(s) | 514 |
| PscI | ACATGT | 1 cut(s) | 312 |
| Psp6I | CCWGG | 1 cut(s) | 733 |
| PspGI | CCWGG | 1 cut(s) | 733 |
| PspN4I | GGNNCC | 1 cut(s) | 545 |
| PspPI | GGNCC | 1 cut(s) | 377 |
| PsuI | RGATCY | 2 cut(s) | 191, 543 |
| RsaI | GTAC | 3 cut(s) | 421, 458, 465 |
| RsaNI | GTAC | 3 cut(s) | 420, 457, 464 |
| RseI | CAYNNNNRTG | 3 cut(s) | 154, 311, 474 |
| SaqAI | TTAA | 6 cut(s) | 162, 201, 231, 252, 698, 777 |
| SatI | GCNGC | 2 cut(s) | 78, 81 |
| Sau3AI | GATC | 4 cut(s) | 191, 543, 646, 654 |
| Sau96I | GGNCC | 1 cut(s) | 377 |
| ScaI | AGTACT | 1 cut(s) | 421 |
| SchI | GAGTC | 1 cut(s) | 515 |
| ScrFI | CCNGG | 1 cut(s) | 735 |
| SetI | ASST | 8 cut(s) | 37, 349, 462, 602, 631, 715, 736, 772 |
| SfaNI | GCATC | 1 cut(s) | 376 |
| SfcI | CTRYAG | 1 cut(s) | 765 |
| SinI | GGWCC | 1 cut(s) | 377 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 154, 311, 474 |
| Sse9I | AATT | 7 cut(s) | 181, 253, 358, 396, 485, 561, 756 |
| SseBI | AGGCCT | 1 cut(s) | 172 |
| SspI | AATATT | 1 cut(s) | 67 |
| SspMI | CTAG | 4 cut(s) | 299, 371, 461, 669 |
| StuI | AGGCCT | 1 cut(s) | 172 |
| StyD4I | CCNGG | 1 cut(s) | 733 |
| StyI | CCWWGG | 2 cut(s) | 101, 380 |
| TaaI | ACNGT | 1 cut(s) | 97 |
| TasI | AATT | 7 cut(s) | 181, 253, 358, 396, 485, 561, 756 |
| TatI | WGTACW | 2 cut(s) | 419, 463 |
| Tru1I | TTAA | 6 cut(s) | 162, 201, 231, 252, 698, 777 |
| Tru9I | TTAA | 6 cut(s) | 162, 201, 231, 252, 698, 777 |
| TscAI | CASTG | 1 cut(s) | 102 |
| TseI | GCWGC | 2 cut(s) | 77, 80 |
| TspDTI | ATGAA | 3 cut(s) | 74, 143, 156 |
| TspGWI | ACGGA | 1 cut(s) | 707 |
| TspRI | CASTG | 1 cut(s) | 102 |
| VpaK11BI | GGWCC | 1 cut(s) | 377 |
| XbaI | TCTAGA | 1 cut(s) | 298 |
| XceI | RCATGY | 2 cut(s) | 316, 560 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 670 |
| XmiI | GTMKAC | 1 cut(s) | 481 |
| XspI | CTAG | 4 cut(s) | 299, 371, 461, 669 |
| ZrmI | AGTACT | 1 cut(s) | 421 |