TMV resistance protein N-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PB1-like | PF26130 | 1 - 77 | 4.6e-11 | PB1-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 662 |
| AclWI | GGATC | 3 cut(s) | 273, 563, 776 |
| AcuI | CTGAAG | 1 cut(s) | 759 |
| AfaI | GTAC | 2 cut(s) | 5, 696 |
| AgsI | TTSAA | 1 cut(s) | 121 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 82 |
| AjnI | CCWGG | 1 cut(s) | 424 |
| AluBI | AGCT | 7 cut(s) | 182, 193, 277, 322, 371, 548, 681 |
| AluI | AGCT | 7 cut(s) | 182, 193, 277, 322, 371, 548, 681 |
| Alw21I | GWGCWC | 1 cut(s) | 683 |
| AlwI | GGATC | 3 cut(s) | 273, 563, 776 |
| Ama87I | CYCGRG | 1 cut(s) | 472 |
| AspS9I | GGNCC | 1 cut(s) | 608 |
| AsuHPI | GGTGA | 4 cut(s) | 402, 447, 725, 851 |
| AsuNHI | GCTAGC | 1 cut(s) | 548 |
| AvaI | CYCGRG | 1 cut(s) | 472 |
| AvaII | GGWCC | 1 cut(s) | 608 |
| BanII | GRGCYC | 1 cut(s) | 683 |
| BbsI | GAAGAC | 2 cut(s) | 780, 807 |
| Bbv12I | GWGCWC | 1 cut(s) | 683 |
| BccI | CCATC | 3 cut(s) | 95, 704, 829 |
| BciT130I | CCWGG | 1 cut(s) | 426 |
| BfaI | CTAG | 3 cut(s) | 549, 635, 690 |
| BfmI | CTRYAG | 1 cut(s) | 130 |
| BglII | AGATCT | 1 cut(s) | 686 |
| Bme1390I | CCNGG | 1 cut(s) | 426 |
| Bme18I | GGWCC | 1 cut(s) | 608 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 82 |
| BmeT110I | CYCGRG | 1 cut(s) | 472 |
| BmgT120I | GGNCC | 1 cut(s) | 608 |
| BmrFI | CCNGG | 1 cut(s) | 426 |
| BmsI | GCATC | 4 cut(s) | 199, 535, 604, 706 |
| BmtI | GCTAGC | 1 cut(s) | 552 |
| BpiI | GAAGAC | 2 cut(s) | 780, 807 |
| BpmI | CTGGAG | 1 cut(s) | 667 |
| BpuEI | CTTGAG | 1 cut(s) | 528 |
| BsaJI | CCNNGG | 4 cut(s) | 7, 413, 425, 458 |
| BseBI | CCWGG | 1 cut(s) | 426 |
| BseDI | CCNNGG | 4 cut(s) | 7, 413, 425, 458 |
| BseGI | GGATG | 7 cut(s) | 181, 319, 526, 607, 655, 715, 840 |
| BseMII | CTCAG | 2 cut(s) | 162, 777 |
| BseRI | GAGGAG | 1 cut(s) | 430 |
| BsiHKAI | GWGCWC | 1 cut(s) | 683 |
| BsiHKCI | CYCGRG | 1 cut(s) | 472 |
| BsiSI | CCGG | 1 cut(s) | 404 |
| BslFI | GGGAC | 3 cut(s) | 181, 299, 455 |
| BsmFI | GGGAC | 3 cut(s) | 181, 299, 455 |
| BsoBI | CYCGRG | 1 cut(s) | 472 |
| Bsp1286I | GDGCHC | 1 cut(s) | 683 |
| Bsp143I | GATC | 5 cut(s) | 202, 265, 568, 686, 781 |
| Bsp19I | CCATGG | 1 cut(s) | 7 |
| BspCNI | CTCAG | 2 cut(s) | 163, 778 |
| BspOI | GCTAGC | 1 cut(s) | 552 |
| BspPI | GGATC | 3 cut(s) | 273, 563, 776 |
| BssECI | CCNNGG | 4 cut(s) | 7, 413, 425, 458 |
| BssMI | GATC | 5 cut(s) | 202, 265, 568, 686, 781 |
| BssT1I | CCWWGG | 1 cut(s) | 7 |
| Bst2UI | CCWGG | 1 cut(s) | 426 |
| Bst4CI | ACNGT | 2 cut(s) | 535, 761 |
| Bst6I | CTCTTC | 2 cut(s) | 288, 699 |
| BstC8I | GCNNGC | 1 cut(s) | 550 |
| BstDEI | CTNAG | 2 cut(s) | 171, 786 |
| BstDSI | CCRYGG | 1 cut(s) | 7 |
| BstF5I | GGATG | 7 cut(s) | 181, 319, 526, 607, 655, 715, 840 |
| BstKTI | GATC | 5 cut(s) | 205, 268, 571, 689, 784 |
| BstMBI | GATC | 5 cut(s) | 202, 265, 568, 686, 781 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 491 |
| BstNI | CCWGG | 1 cut(s) | 426 |
| BstSCI | CCNGG | 1 cut(s) | 424 |
| BstSFI | CTRYAG | 1 cut(s) | 130 |
| BstV2I | GAAGAC | 2 cut(s) | 780, 807 |
| BstX2I | RGATCY | 1 cut(s) | 686 |
| BstYI | RGATCY | 1 cut(s) | 686 |
| BtgI | CCRYGG | 1 cut(s) | 7 |
| BtsCI | GGATG | 7 cut(s) | 181, 319, 526, 607, 655, 715, 840 |
| BtsIMutI | CAGTG | 1 cut(s) | 198 |
| Cac8I | GCNNGC | 1 cut(s) | 550 |
| Cfr13I | GGNCC | 1 cut(s) | 608 |
| Csp6I | GTAC | 2 cut(s) | 4, 695 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 187, 222, 607, 642 |
| CviAII | CATG | 5 cut(s) | 8, 350, 378, 622, 844 |
| CviQI | GTAC | 2 cut(s) | 4, 695 |
| DdeI | CTNAG | 2 cut(s) | 171, 786 |
| DpnI | GATC | 5 cut(s) | 204, 267, 570, 688, 783 |
| DpnII | GATC | 5 cut(s) | 202, 265, 568, 686, 781 |
| DriI | GACNNNNNGTC | 1 cut(s) | 82 |
| Eam1104I | CTCTTC | 2 cut(s) | 288, 699 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 82 |
| EarI | CTCTTC | 2 cut(s) | 288, 699 |
| Ecl136II | GAGCTC | 1 cut(s) | 681 |
| Eco130I | CCWWGG | 1 cut(s) | 7 |
| Eco24I | GRGCYC | 1 cut(s) | 683 |
| Eco47I | GGWCC | 1 cut(s) | 608 |
| Eco53kI | GAGCTC | 1 cut(s) | 681 |
| Eco57I | CTGAAG | 1 cut(s) | 759 |
| Eco88I | CYCGRG | 1 cut(s) | 472 |
| EcoICRI | GAGCTC | 1 cut(s) | 681 |
| EcoO109I | RGGNCCY | 1 cut(s) | 608 |
| EcoRII | CCWGG | 1 cut(s) | 424 |
| EcoT14I | CCWWGG | 1 cut(s) | 7 |
| EcoT38I | GRGCYC | 1 cut(s) | 683 |
| ErhI | CCWWGG | 1 cut(s) | 7 |
| FaeI | CATG | 5 cut(s) | 11, 353, 381, 625, 847 |
| FaqI | GGGAC | 3 cut(s) | 181, 299, 455 |
| FatI | CATG | 5 cut(s) | 7, 349, 377, 621, 843 |
| FblI | GTMKAC | 1 cut(s) | 662 |
| FokI | GGATG | 7 cut(s) | 188, 326, 513, 614, 662, 722, 847 |
| FriOI | GRGCYC | 1 cut(s) | 683 |
| FspBI | CTAG | 3 cut(s) | 549, 635, 690 |
| GsuI | CTGGAG | 1 cut(s) | 667 |
| HapII | CCGG | 1 cut(s) | 404 |
| Hin1II | CATG | 5 cut(s) | 11, 353, 381, 625, 847 |
| HindIII | AAGCTT | 2 cut(s) | 180, 191 |
| HinfI | GANTC | 4 cut(s) | 407, 452, 725, 734 |
| HpaII | CCGG | 1 cut(s) | 404 |
| HphI | GGTGA | 4 cut(s) | 402, 447, 725, 851 |
| Hpy166II | GTNNAC | 2 cut(s) | 663, 695 |
| Hpy188I | TCNGA | 2 cut(s) | 739, 766 |
| Hpy188III | TCNNGA | 6 cut(s) | 206, 449, 472, 498, 684, 785 |
| Hpy8I | GTNNAC | 2 cut(s) | 663, 695 |
| HpyAV | CCTTC | 4 cut(s) | 40, 484, 599, 734 |
| HpyCH4III | ACNGT | 2 cut(s) | 535, 761 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 491 |
| HpyF3I | CTNAG | 2 cut(s) | 171, 786 |
| Hsp92II | CATG | 5 cut(s) | 11, 353, 381, 625, 847 |
| Kzo9I | GATC | 5 cut(s) | 202, 265, 568, 686, 781 |
| LmnI | GCTCC | 3 cut(s) | 274, 678, 686 |
| LpnPI | CCDG | 9 cut(s) | 357, 411, 417, 438, 462, 483, 624, 697, 798 |
| LweI | GCATC | 4 cut(s) | 199, 535, 604, 706 |
| MaeI | CTAG | 3 cut(s) | 549, 635, 690 |
| MaeIII | GTNAC | 2 cut(s) | 84, 839 |
| MalI | GATC | 5 cut(s) | 204, 267, 570, 688, 783 |
| MboI | GATC | 5 cut(s) | 202, 265, 568, 686, 781 |
| MboII | GAAGA | 8 cut(s) | 305, 347, 350, 407, 716, 779, 785, 812 |
| MflI | RGATCY | 1 cut(s) | 686 |
| MhlI | GDGCHC | 1 cut(s) | 683 |
| MluCI | AATT | 3 cut(s) | 240, 398, 501 |
| MmeI | TCCRAC | 2 cut(s) | 498, 554 |
| MnlI | CCTC | 9 cut(s) | 135, 166, 276, 304, 408, 411, 453, 700, 748 |
| MseI | TTAA | 4 cut(s) | 21, 185, 654, 858 |
| MspI | CCGG | 1 cut(s) | 404 |
| MspR9I | CCNGG | 1 cut(s) | 426 |
| MvaI | CCWGG | 1 cut(s) | 426 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 491 |
| NcoI | CCATGG | 1 cut(s) | 7 |
| NdeII | GATC | 5 cut(s) | 202, 265, 568, 686, 781 |
| NheI | GCTAGC | 1 cut(s) | 548 |
| NlaIII | CATG | 5 cut(s) | 11, 353, 381, 625, 847 |
| NmuCI | GTSAC | 2 cut(s) | 84, 839 |
| PfeI | GAWTC | 4 cut(s) | 407, 452, 725, 734 |
| PpuMI | RGGWCCY | 1 cut(s) | 608 |
| Psp124BI | GAGCTC | 1 cut(s) | 683 |
| Psp5II | RGGWCCY | 1 cut(s) | 608 |
| Psp6I | CCWGG | 1 cut(s) | 424 |
| PspGI | CCWGG | 1 cut(s) | 424 |
| PspPI | GGNCC | 1 cut(s) | 608 |
| PspPPI | RGGWCCY | 1 cut(s) | 608 |
| PsuI | RGATCY | 1 cut(s) | 686 |
| RsaI | GTAC | 2 cut(s) | 5, 696 |
| RsaNI | GTAC | 2 cut(s) | 4, 695 |
| SacI | GAGCTC | 1 cut(s) | 683 |
| SaqAI | TTAA | 4 cut(s) | 21, 185, 654, 858 |
| Sau3AI | GATC | 5 cut(s) | 202, 265, 568, 686, 781 |
| Sau96I | GGNCC | 1 cut(s) | 608 |
| ScrFI | CCNGG | 1 cut(s) | 426 |
| SduI | GDGCHC | 1 cut(s) | 683 |
| SfaNI | GCATC | 4 cut(s) | 199, 535, 604, 706 |
| SfcI | CTRYAG | 1 cut(s) | 130 |
| SinI | GGWCC | 1 cut(s) | 608 |
| SmlI | CTYRAG | 1 cut(s) | 543 |
| SmoI | CTYRAG | 1 cut(s) | 543 |
| Sse9I | AATT | 3 cut(s) | 240, 398, 501 |
| SspMI | CTAG | 3 cut(s) | 549, 635, 690 |
| SstI | GAGCTC | 1 cut(s) | 683 |
| StyD4I | CCNGG | 1 cut(s) | 424 |
| StyI | CCWWGG | 1 cut(s) | 7 |
| TaaI | ACNGT | 2 cut(s) | 535, 761 |
| TaqI | TCGA | 1 cut(s) | 393 |
| TasI | AATT | 3 cut(s) | 240, 398, 501 |
| TfiI | GAWTC | 4 cut(s) | 407, 452, 725, 734 |
| Tru1I | TTAA | 4 cut(s) | 21, 185, 654, 858 |
| Tru9I | TTAA | 4 cut(s) | 21, 185, 654, 858 |
| TscAI | CASTG | 1 cut(s) | 205 |
| TseFI | GTSAC | 2 cut(s) | 84, 839 |
| Tsp45I | GTSAC | 2 cut(s) | 84, 839 |
| TspDTI | ATGAA | 9 cut(s) | 192, 306, 348, 366, 618, 684, 717, 786, 813 |
| TspRI | CASTG | 1 cut(s) | 205 |
| VpaK11BI | GGWCC | 1 cut(s) | 608 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 38, 131 |
| XmiI | GTMKAC | 1 cut(s) | 662 |
| XspI | CTAG | 3 cut(s) | 549, 635, 690 |