No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| B3 | PF02362 | 63 - 122 | 1.7e-08 | B3 DNA binding domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 197 |
| AclWI | GGATC | 3 cut(s) | 130, 143, 235 |
| AcsI | RAATTY | 1 cut(s) | 56 |
| AfaI | GTAC | 1 cut(s) | 337 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 71 |
| AflIII | ACRYGT | 2 cut(s) | 109, 218 |
| AgsI | TTSAA | 3 cut(s) | 41, 295, 320 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 259 |
| AhlI | ACTAGT | 1 cut(s) | 343 |
| AluBI | AGCT | 1 cut(s) | 383 |
| AluI | AGCT | 1 cut(s) | 383 |
| AlwI | GGATC | 3 cut(s) | 130, 143, 235 |
| AoxI | GGCC | 1 cut(s) | 62 |
| ApoI | RAATTY | 1 cut(s) | 56 |
| AsuHPI | GGTGA | 3 cut(s) | 181, 383, 419 |
| BamHI | GGATCC | 1 cut(s) | 135 |
| BccI | CCATC | 3 cut(s) | 172, 218, 299 |
| BcuI | ACTAGT | 1 cut(s) | 343 |
| BfaI | CTAG | 2 cut(s) | 98, 344 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 259 |
| BmiI | GGNNCC | 1 cut(s) | 137 |
| BmrI | ACTGGG | 1 cut(s) | 140 |
| BmsI | GCATC | 1 cut(s) | 299 |
| BmuI | ACTGGG | 1 cut(s) | 140 |
| BpmI | CTGGAG | 1 cut(s) | 321 |
| BsaJI | CCNNGG | 1 cut(s) | 367 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 71 |
| Bse1I | ACTGG | 1 cut(s) | 135 |
| BseDI | CCNNGG | 1 cut(s) | 367 |
| BseGI | GGATG | 3 cut(s) | 151, 314, 375 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 71 |
| BseNI | ACTGG | 1 cut(s) | 135 |
| BseYI | CCCAGC | 2 cut(s) | 139, 379 |
| BsgI | GTGCAG | 1 cut(s) | 352 |
| BshFI | GGCC | 1 cut(s) | 64 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 71 |
| BsnI | GGCC | 1 cut(s) | 64 |
| Bsp143I | GATC | 2 cut(s) | 135, 227 |
| BspACI | CCGC | 1 cut(s) | 197 |
| BspANI | GGCC | 1 cut(s) | 64 |
| BspLI | GGNNCC | 1 cut(s) | 137 |
| BspPI | GGATC | 3 cut(s) | 130, 143, 235 |
| BsrI | ACTGG | 1 cut(s) | 135 |
| BssECI | CCNNGG | 1 cut(s) | 367 |
| BssMI | GATC | 2 cut(s) | 135, 227 |
| Bst4CI | ACNGT | 2 cut(s) | 120, 184 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 69 |
| BstF5I | GGATG | 3 cut(s) | 151, 314, 375 |
| BstKTI | GATC | 2 cut(s) | 138, 230 |
| BstMBI | GATC | 2 cut(s) | 135, 227 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 11 |
| BstNSI | RCATGY | 2 cut(s) | 113, 222 |
| BstX2I | RGATCY | 1 cut(s) | 135 |
| BstYI | RGATCY | 1 cut(s) | 135 |
| BsuRI | GGCC | 1 cut(s) | 64 |
| BtsCI | GGATG | 3 cut(s) | 151, 314, 375 |
| Csp6I | GTAC | 1 cut(s) | 336 |
| CviAII | CATG | 5 cut(s) | 47, 110, 219, 264, 325 |
| CviJI | RGCY | 8 cut(s) | 14, 64, 143, 249, 299, 383, 416, 424 |
| CviKI_1 | RGCY | 8 cut(s) | 14, 64, 143, 249, 299, 383, 416, 424 |
| CviQI | GTAC | 1 cut(s) | 336 |
| DpnI | GATC | 2 cut(s) | 137, 229 |
| DpnII | GATC | 2 cut(s) | 135, 227 |
| DriI | GACNNNNNGTC | 1 cut(s) | 259 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 259 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 69 |
| FaeI | CATG | 5 cut(s) | 50, 113, 222, 267, 328 |
| FaiI | YATR | 7 cut(s) | 48, 92, 111, 220, 265, 326, 436 |
| FatI | CATG | 5 cut(s) | 46, 109, 218, 263, 324 |
| FauI | CCCGC | 1 cut(s) | 190 |
| FokI | GGATG | 3 cut(s) | 138, 321, 362 |
| FspBI | CTAG | 2 cut(s) | 98, 344 |
| GsaI | CCCAGC | 2 cut(s) | 143, 383 |
| GsuI | CTGGAG | 1 cut(s) | 321 |
| HaeIII | GGCC | 1 cut(s) | 64 |
| Hin1II | CATG | 5 cut(s) | 50, 113, 222, 267, 328 |
| HinfI | GANTC | 3 cut(s) | 8, 260, 354 |
| HphI | GGTGA | 3 cut(s) | 181, 383, 419 |
| Hpy188I | TCNGA | 2 cut(s) | 28, 368 |
| Hpy188III | TCNNGA | 1 cut(s) | 72 |
| HpyAV | CCTTC | 2 cut(s) | 289, 391 |
| HpyCH4III | ACNGT | 2 cut(s) | 120, 184 |
| HpyCH4V | TGCA | 2 cut(s) | 46, 333 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 11 |
| Hsp92II | CATG | 5 cut(s) | 50, 113, 222, 267, 328 |
| Kzo9I | GATC | 2 cut(s) | 135, 227 |
| LpnPI | CCDG | 5 cut(s) | 57, 116, 153, 285, 393 |
| LweI | GCATC | 1 cut(s) | 299 |
| MaeI | CTAG | 2 cut(s) | 98, 344 |
| MaeIII | GTNAC | 2 cut(s) | 371, 407 |
| MalI | GATC | 2 cut(s) | 137, 229 |
| MboI | GATC | 2 cut(s) | 135, 227 |
| MboII | GAAGA | 1 cut(s) | 65 |
| MfeI | CAATTG | 1 cut(s) | 41 |
| MflI | RGATCY | 1 cut(s) | 135 |
| MluCI | AATT | 4 cut(s) | 36, 41, 56, 289 |
| MlyI | GAGTC | 2 cut(s) | 269, 363 |
| MnlI | CCTC | 4 cut(s) | 31, 75, 362, 374 |
| MseI | TTAA | 1 cut(s) | 350 |
| MspA1I | CMGCKG | 1 cut(s) | 383 |
| MunI | CAATTG | 1 cut(s) | 41 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 11 |
| NdeII | GATC | 2 cut(s) | 135, 227 |
| NlaIII | CATG | 5 cut(s) | 50, 113, 222, 267, 328 |
| NlaIV | GGNNCC | 1 cut(s) | 137 |
| NmuCI | GTSAC | 2 cut(s) | 371, 407 |
| NspI | RCATGY | 2 cut(s) | 113, 222 |
| PciI | ACATGT | 2 cut(s) | 109, 218 |
| PfeI | GAWTC | 1 cut(s) | 8 |
| PleI | GAGTC | 2 cut(s) | 268, 362 |
| PpsI | GAGTC | 2 cut(s) | 268, 362 |
| PscI | ACATGT | 2 cut(s) | 109, 218 |
| PspFI | CCCAGC | 2 cut(s) | 139, 379 |
| PspN4I | GGNNCC | 1 cut(s) | 137 |
| PsuI | RGATCY | 1 cut(s) | 135 |
| PvuII | CAGCTG | 1 cut(s) | 383 |
| RsaI | GTAC | 1 cut(s) | 337 |
| RsaNI | GTAC | 1 cut(s) | 336 |
| SaqAI | TTAA | 1 cut(s) | 350 |
| Sau3AI | GATC | 2 cut(s) | 135, 227 |
| SchI | GAGTC | 2 cut(s) | 269, 363 |
| SetI | ASST | 5 cut(s) | 82, 194, 373, 385, 409 |
| SfaNI | GCATC | 1 cut(s) | 299 |
| SpeI | ACTAGT | 1 cut(s) | 343 |
| Sse9I | AATT | 4 cut(s) | 36, 41, 56, 289 |
| SsiI | CCGC | 1 cut(s) | 197 |
| SspMI | CTAG | 2 cut(s) | 98, 344 |
| TaaI | ACNGT | 2 cut(s) | 120, 184 |
| TasI | AATT | 4 cut(s) | 36, 41, 56, 289 |
| TatI | WGTACW | 1 cut(s) | 335 |
| TfiI | GAWTC | 1 cut(s) | 8 |
| Tru1I | TTAA | 1 cut(s) | 350 |
| Tru9I | TTAA | 1 cut(s) | 350 |
| TseFI | GTSAC | 2 cut(s) | 371, 407 |
| Tsp45I | GTSAC | 2 cut(s) | 371, 407 |
| TspDTI | ATGAA | 2 cut(s) | 140, 162 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 69 |
| XapI | RAATTY | 1 cut(s) | 56 |
| XceI | RCATGY | 2 cut(s) | 113, 222 |
| XspI | CTAG | 2 cut(s) | 98, 344 |