TMV resistance protein N-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 401 |
| AccIII | TCCGGA | 1 cut(s) | 193 |
| AcoI | YGGCCR | 1 cut(s) | 112 |
| AfaI | GTAC | 2 cut(s) | 104, 227 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 17, 401, 568, 658 |
| AgeI | ACCGGT | 1 cut(s) | 621 |
| AgsI | TTSAA | 4 cut(s) | 415, 439, 485, 676 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 151 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 205, 237 |
| AluBI | AGCT | 2 cut(s) | 262, 664 |
| AluI | AGCT | 2 cut(s) | 262, 664 |
| Alw21I | GWGCWC | 1 cut(s) | 306 |
| Ama87I | CYCGRG | 1 cut(s) | 305 |
| Aor13HI | TCCGGA | 1 cut(s) | 193 |
| AoxI | GGCC | 2 cut(s) | 8, 112 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 329, 361, 599, 631 |
| AseI | ATTAAT | 1 cut(s) | 189 |
| AsiGI | ACCGGT | 1 cut(s) | 621 |
| AspS9I | GGNCC | 1 cut(s) | 525 |
| AsuC2I | CCSGG | 2 cut(s) | 205, 479 |
| AsuHPI | GGTGA | 1 cut(s) | 190 |
| AvaI | CYCGRG | 1 cut(s) | 305 |
| AvaII | GGWCC | 1 cut(s) | 525 |
| BalI | TGGCCA | 1 cut(s) | 114 |
| Bbv12I | GWGCWC | 1 cut(s) | 306 |
| BccI | CCATC | 2 cut(s) | 104, 403 |
| BciVI | GTATCC | 1 cut(s) | 14 |
| BcnI | CCSGG | 2 cut(s) | 205, 479 |
| BfaI | CTAG | 1 cut(s) | 210 |
| BfuI | GTATCC | 1 cut(s) | 14 |
| BlpI | GCTNAGC | 1 cut(s) | 378 |
| Bme1390I | CCNGG | 2 cut(s) | 205, 479 |
| Bme18I | GGWCC | 1 cut(s) | 525 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 151 |
| BmeT110I | CYCGRG | 1 cut(s) | 305 |
| BmgT120I | GGNCC | 1 cut(s) | 525 |
| BmrFI | CCNGG | 2 cut(s) | 205, 479 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 378 |
| BpuMI | CCSGG | 2 cut(s) | 205, 479 |
| Bsa29I | ATCGAT | 1 cut(s) | 120 |
| BsaJI | CCNNGG | 3 cut(s) | 400, 528, 567 |
| BsaWI | WCCGGW | 2 cut(s) | 193, 621 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 17, 401, 568, 658 |
| Bse118I | RCCGGY | 1 cut(s) | 621 |
| Bse3DI | GCAATG | 1 cut(s) | 258 |
| BseAI | TCCGGA | 1 cut(s) | 193 |
| BseCI | ATCGAT | 1 cut(s) | 120 |
| BseDI | CCNNGG | 3 cut(s) | 400, 528, 567 |
| BseGI | GGATG | 3 cut(s) | 395, 538, 577 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 17, 401, 568, 658 |
| BseMI | GCAATG | 1 cut(s) | 258 |
| BseMII | CTCAG | 1 cut(s) | 555 |
| BseRI | GAGGAG | 3 cut(s) | 257, 524, 674 |
| BshFI | GGCC | 2 cut(s) | 10, 114 |
| BshTI | ACCGGT | 1 cut(s) | 621 |
| BshVI | ATCGAT | 1 cut(s) | 120 |
| BsiHKAI | GWGCWC | 1 cut(s) | 306 |
| BsiHKCI | CYCGRG | 1 cut(s) | 305 |
| BsiSI | CCGG | 4 cut(s) | 194, 204, 478, 622 |
| BslFI | GGGAC | 1 cut(s) | 220 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 17, 401, 568, 658 |
| BsmFI | GGGAC | 1 cut(s) | 220 |
| BsnI | GGCC | 2 cut(s) | 10, 114 |
| BsoBI | CYCGRG | 1 cut(s) | 305 |
| Bsp1286I | GDGCHC | 1 cut(s) | 306 |
| Bsp13I | TCCGGA | 1 cut(s) | 193 |
| Bsp143I | GATC | 1 cut(s) | 309 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 378 |
| BspANI | GGCC | 2 cut(s) | 10, 114 |
| BspCNI | CTCAG | 1 cut(s) | 554 |
| BspDI | ATCGAT | 1 cut(s) | 120 |
| BspEI | TCCGGA | 1 cut(s) | 193 |
| BsrDI | GCAATG | 1 cut(s) | 258 |
| BsrFI | RCCGGY | 1 cut(s) | 621 |
| BssAI | RCCGGY | 1 cut(s) | 621 |
| BssECI | CCNNGG | 3 cut(s) | 400, 528, 567 |
| BssMI | GATC | 1 cut(s) | 309 |
| BssT1I | CCWWGG | 2 cut(s) | 400, 567 |
| Bst4CI | ACNGT | 2 cut(s) | 64, 277 |
| Bst6I | CTCTTC | 2 cut(s) | 363, 501 |
| BstDEI | CTNAG | 4 cut(s) | 258, 298, 378, 541 |
| BstF5I | GGATG | 3 cut(s) | 395, 538, 577 |
| BstKTI | GATC | 1 cut(s) | 312 |
| BstMBI | GATC | 1 cut(s) | 309 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 278 |
| BstSCI | CCNGG | 2 cut(s) | 203, 477 |
| Bsu15I | ATCGAT | 1 cut(s) | 120 |
| BsuI | GTATCC | 1 cut(s) | 14 |
| BsuRI | GGCC | 2 cut(s) | 10, 114 |
| BsuTUI | ATCGAT | 1 cut(s) | 120 |
| BtsCI | GGATG | 3 cut(s) | 395, 538, 577 |
| Cfr10I | RCCGGY | 1 cut(s) | 621 |
| Cfr13I | GGNCC | 1 cut(s) | 525 |
| ClaI | ATCGAT | 1 cut(s) | 120 |
| CseI | GACGC | 1 cut(s) | 257 |
| Csp6I | GTAC | 2 cut(s) | 103, 226 |
| CspAI | ACCGGT | 1 cut(s) | 621 |
| CviAII | CATG | 1 cut(s) | 71 |
| CviJI | RGCY | 8 cut(s) | 10, 78, 114, 262, 340, 377, 382, 664 |
| CviKI_1 | RGCY | 8 cut(s) | 10, 78, 114, 262, 340, 377, 382, 664 |
| CviQI | GTAC | 2 cut(s) | 103, 226 |
| DdeI | CTNAG | 4 cut(s) | 258, 298, 378, 541 |
| DpnI | GATC | 1 cut(s) | 311 |
| DpnII | GATC | 1 cut(s) | 309 |
| DriI | GACNNNNNGTC | 1 cut(s) | 151 |
| EaeI | YGGCCR | 1 cut(s) | 112 |
| Eam1104I | CTCTTC | 2 cut(s) | 363, 501 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 151 |
| EarI | CTCTTC | 2 cut(s) | 363, 501 |
| Eco130I | CCWWGG | 2 cut(s) | 400, 567 |
| Eco47I | GGWCC | 1 cut(s) | 525 |
| Eco88I | CYCGRG | 1 cut(s) | 305 |
| EcoT14I | CCWWGG | 2 cut(s) | 400, 567 |
| ErhI | CCWWGG | 2 cut(s) | 400, 567 |
| FaeI | CATG | 1 cut(s) | 74 |
| FaiI | YATR | 7 cut(s) | 72, 83, 176, 283, 558, 585, 594 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 630, 662 |
| FaqI | GGGAC | 1 cut(s) | 220 |
| FatI | CATG | 1 cut(s) | 70 |
| FokI | GGATG | 3 cut(s) | 382, 545, 584 |
| FspBI | CTAG | 1 cut(s) | 210 |
| HaeIII | GGCC | 2 cut(s) | 10, 114 |
| HapII | CCGG | 4 cut(s) | 194, 204, 478, 622 |
| HgaI | GACGC | 1 cut(s) | 257 |
| Hin1II | CATG | 1 cut(s) | 74 |
| HinfI | GANTC | 5 cut(s) | 122, 170, 326, 411, 539 |
| HpaII | CCGG | 4 cut(s) | 194, 204, 478, 622 |
| HphI | GGTGA | 1 cut(s) | 190 |
| Hpy188I | TCNGA | 1 cut(s) | 529 |
| Hpy188III | TCNNGA | 3 cut(s) | 194, 307, 485 |
| Hpy99I | CGWCG | 1 cut(s) | 95 |
| HpyAV | CCTTC | 6 cut(s) | 89, 367, 421, 491, 632, 673 |
| HpyCH4III | ACNGT | 2 cut(s) | 64, 277 |
| HpyCH4V | TGCA | 1 cut(s) | 281 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 278 |
| HpyF3I | CTNAG | 4 cut(s) | 258, 298, 378, 541 |
| Hsp92II | CATG | 1 cut(s) | 74 |
| Kpn2I | TCCGGA | 1 cut(s) | 193 |
| Kzo9I | GATC | 1 cut(s) | 309 |
| LmnI | GCTCC | 1 cut(s) | 661 |
| LpnPI | CCDG | 4 cut(s) | 207, 217, 491, 635 |
| MaeI | CTAG | 1 cut(s) | 210 |
| MaeIII | GTNAC | 1 cut(s) | 128 |
| MalI | GATC | 1 cut(s) | 311 |
| MboI | GATC | 1 cut(s) | 309 |
| MboII | GAAGA | 7 cut(s) | 58, 380, 436, 479, 500, 503, 518 |
| MhlI | GDGCHC | 1 cut(s) | 306 |
| MlsI | TGGCCA | 1 cut(s) | 114 |
| MluCI | AATT | 2 cut(s) | 186, 362 |
| MluNI | TGGCCA | 1 cut(s) | 114 |
| MlyI | GAGTC | 1 cut(s) | 533 |
| Mox20I | TGGCCA | 1 cut(s) | 114 |
| MroI | TCCGGA | 1 cut(s) | 193 |
| MscI | TGGCCA | 1 cut(s) | 114 |
| MseI | TTAA | 4 cut(s) | 138, 189, 626, 648 |
| MslI | CAYNNNNRTG | 1 cut(s) | 286 |
| Msp20I | TGGCCA | 1 cut(s) | 114 |
| MspI | CCGG | 4 cut(s) | 194, 204, 478, 622 |
| MspR9I | CCNGG | 2 cut(s) | 205, 479 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 278 |
| NciI | CCSGG | 2 cut(s) | 205, 479 |
| NdeII | GATC | 1 cut(s) | 309 |
| NlaIII | CATG | 1 cut(s) | 74 |
| NmuCI | GTSAC | 1 cut(s) | 128 |
| PaeR7I | CTCGAG | 1 cut(s) | 305 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 594 |
| PfeI | GAWTC | 4 cut(s) | 122, 170, 326, 411 |
| PflFI | GACNNNGTC | 1 cut(s) | 542 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 401 |
| PinAI | ACCGGT | 1 cut(s) | 621 |
| PleI | GAGTC | 1 cut(s) | 533 |
| PpsI | GAGTC | 1 cut(s) | 533 |
| PshBI | ATTAAT | 1 cut(s) | 189 |
| PspPI | GGNCC | 1 cut(s) | 525 |
| PsyI | GACNNNGTC | 1 cut(s) | 542 |
| RsaI | GTAC | 2 cut(s) | 104, 227 |
| RsaNI | GTAC | 2 cut(s) | 103, 226 |
| RseI | CAYNNNNRTG | 1 cut(s) | 286 |
| SaqAI | TTAA | 4 cut(s) | 138, 189, 626, 648 |
| Sau3AI | GATC | 1 cut(s) | 309 |
| Sau96I | GGNCC | 1 cut(s) | 525 |
| SchI | GAGTC | 1 cut(s) | 533 |
| ScrFI | CCNGG | 2 cut(s) | 205, 479 |
| SduI | GDGCHC | 1 cut(s) | 306 |
| SetI | ASST | 4 cut(s) | 27, 264, 432, 666 |
| Sfr274I | CTCGAG | 1 cut(s) | 305 |
| SinI | GGWCC | 1 cut(s) | 525 |
| SlaI | CTCGAG | 1 cut(s) | 305 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 286 |
| SmlI | CTYRAG | 1 cut(s) | 305 |
| SmoI | CTYRAG | 1 cut(s) | 305 |
| Sse9I | AATT | 2 cut(s) | 186, 362 |
| SspMI | CTAG | 1 cut(s) | 210 |
| StyD4I | CCNGG | 2 cut(s) | 203, 477 |
| StyI | CCWWGG | 2 cut(s) | 400, 567 |
| TaaI | ACNGT | 2 cut(s) | 64, 277 |
| TaqI | TCGA | 5 cut(s) | 93, 120, 234, 306, 546 |
| TasI | AATT | 2 cut(s) | 186, 362 |
| TatI | WGTACW | 1 cut(s) | 102 |
| TfiI | GAWTC | 4 cut(s) | 122, 170, 326, 411 |
| Tru1I | TTAA | 4 cut(s) | 138, 189, 626, 648 |
| Tru9I | TTAA | 4 cut(s) | 138, 189, 626, 648 |
| TseFI | GTSAC | 1 cut(s) | 128 |
| Tsp45I | GTSAC | 1 cut(s) | 128 |
| TspDTI | ATGAA | 4 cut(s) | 29, 456, 510, 594 |
| Tth111I | GACNNNGTC | 1 cut(s) | 542 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 401 |
| VpaK11BI | GGWCC | 1 cut(s) | 525 |
| VspI | ATTAAT | 1 cut(s) | 189 |
| XhoI | CTCGAG | 1 cut(s) | 305 |
| XspI | CTAG | 1 cut(s) | 210 |