No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0329171 RchiOBHm_Chr3g0465871 RchiOBHm_Chr3g0465881 RchiOBHm_Chr5g0077491 |
| rosa_laevigata | RLG00000003324 RLG00000018512 RLG00000022062 |
| rosa_multiflora | Rmu_co8434517.1_g000001 Rmu_sc0000704.1_g000010 Rmu_sc0001524.1_g000020 Rmu_sc0003323.1_g000019 Rmu_sc0005816.1_g000009 Rmu_sc0007705.1_g000011 Rmu_sc0009386.1_g000005 Rmu_sc0011593.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00362020 |
| rosa_rugosa | Rorug02G0311000 |
| rosa_samantha | Rh1BG155000 Rh1CG078400 Rh1DG084800 Rh1DG455000 Rh2BG224200 Rh3BG145100 Rh3DG146200 Rh5AG378500 Rh5AG506900 Rh5CG262800 Rh5CG400500 |
| rosa_wichuraiana | Rw3G011730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 79 |
| AciI | CCGC | 5 cut(s) | 92, 95, 155, 158, 190 |
| AclWI | GGATC | 1 cut(s) | 168 |
| AcoI | YGGCCR | 1 cut(s) | 122 |
| AcyI | GRCGYC | 1 cut(s) | 76 |
| AfaI | GTAC | 1 cut(s) | 104 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 58, 186, 189 |
| AflIII | ACRYGT | 1 cut(s) | 233 |
| AjnI | CCWGG | 1 cut(s) | 182 |
| AluBI | AGCT | 2 cut(s) | 38, 246 |
| AluI | AGCT | 2 cut(s) | 38, 246 |
| AlwI | GGATC | 1 cut(s) | 168 |
| AoxI | GGCC | 1 cut(s) | 122 |
| AsuHPI | GGTGA | 1 cut(s) | 109 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 94, 127 |
| BalI | TGGCCA | 1 cut(s) | 124 |
| BciT130I | CCWGG | 1 cut(s) | 184 |
| BisI | GCNGC | 2 cut(s) | 93, 156 |
| BlsI | GCNGC | 2 cut(s) | 94, 157 |
| Bme1390I | CCNGG | 1 cut(s) | 184 |
| BmrFI | CCNGG | 1 cut(s) | 184 |
| BsaHI | GRCGYC | 1 cut(s) | 76 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 58, 186, 189 |
| BseBI | CCWGG | 1 cut(s) | 184 |
| BseGI | GGATG | 3 cut(s) | 19, 152, 199 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 58, 186, 189 |
| Bsh1285I | CGRYCG | 1 cut(s) | 227 |
| BshFI | GGCC | 1 cut(s) | 124 |
| BsiEI | CGRYCG | 1 cut(s) | 227 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 58, 186, 189 |
| BsnI | GGCC | 1 cut(s) | 124 |
| Bsp143I | GATC | 2 cut(s) | 160, 224 |
| BspACI | CCGC | 5 cut(s) | 92, 95, 155, 158, 190 |
| BspANI | GGCC | 1 cut(s) | 124 |
| BspPI | GGATC | 1 cut(s) | 168 |
| BssMI | GATC | 2 cut(s) | 160, 224 |
| BssNI | GRCGYC | 1 cut(s) | 76 |
| Bst2UI | CCWGG | 1 cut(s) | 184 |
| Bst4CI | ACNGT | 2 cut(s) | 53, 142 |
| BstACI | GRCGYC | 1 cut(s) | 76 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 173 |
| BstDEI | CTNAG | 1 cut(s) | 14 |
| BstF5I | GGATG | 3 cut(s) | 19, 152, 199 |
| BstKTI | GATC | 2 cut(s) | 163, 227 |
| BstMBI | GATC | 2 cut(s) | 160, 224 |
| BstMCI | CGRYCG | 1 cut(s) | 227 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 164, 173 |
| BstNI | CCWGG | 1 cut(s) | 184 |
| BstNSI | RCATGY | 1 cut(s) | 237 |
| BstSCI | CCNGG | 1 cut(s) | 182 |
| BsuRI | GGCC | 1 cut(s) | 124 |
| BtsCI | GGATG | 3 cut(s) | 19, 152, 199 |
| Csp6I | GTAC | 1 cut(s) | 103 |
| CviAII | CATG | 3 cut(s) | 67, 164, 234 |
| CviJI | RGCY | 4 cut(s) | 38, 124, 131, 246 |
| CviKI_1 | RGCY | 4 cut(s) | 38, 124, 131, 246 |
| CviQI | GTAC | 1 cut(s) | 103 |
| DdeI | CTNAG | 1 cut(s) | 14 |
| DpnI | GATC | 2 cut(s) | 162, 226 |
| DpnII | GATC | 2 cut(s) | 160, 224 |
| EaeI | YGGCCR | 1 cut(s) | 122 |
| EciI | GGCGGA | 1 cut(s) | 173 |
| EcoRII | CCWGG | 1 cut(s) | 182 |
| EcoT22I | ATGCAT | 1 cut(s) | 169 |
| FaeI | CATG | 3 cut(s) | 70, 167, 237 |
| FaiI | YATR | 6 cut(s) | 28, 68, 82, 121, 165, 235 |
| FatI | CATG | 3 cut(s) | 66, 163, 233 |
| FauI | CCCGC | 1 cut(s) | 183 |
| Fnu4HI | GCNGC | 2 cut(s) | 93, 156 |
| FokI | GGATG | 3 cut(s) | 6, 159, 206 |
| Fsp4HI | GCNGC | 2 cut(s) | 93, 156 |
| GluI | GCNGC | 2 cut(s) | 93, 156 |
| HaeIII | GGCC | 1 cut(s) | 124 |
| Hin1I | GRCGYC | 1 cut(s) | 76 |
| Hin1II | CATG | 3 cut(s) | 70, 167, 237 |
| HphI | GGTGA | 1 cut(s) | 109 |
| Hpy166II | GTNNAC | 1 cut(s) | 49 |
| Hpy188I | TCNGA | 1 cut(s) | 11 |
| Hpy8I | GTNNAC | 1 cut(s) | 49 |
| Hpy99I | CGWCG | 2 cut(s) | 142, 213 |
| HpyCH4III | ACNGT | 2 cut(s) | 53, 142 |
| HpyCH4IV | ACGT | 1 cut(s) | 76 |
| HpyCH4V | TGCA | 3 cut(s) | 43, 167, 176 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 164, 173 |
| HpyF3I | CTNAG | 1 cut(s) | 14 |
| HpySE526I | ACGT | 1 cut(s) | 76 |
| Hsp92I | GRCGYC | 1 cut(s) | 76 |
| Hsp92II | CATG | 3 cut(s) | 70, 167, 237 |
| Kzo9I | GATC | 2 cut(s) | 160, 224 |
| LpnPI | CCDG | 2 cut(s) | 169, 196 |
| MaeII | ACGT | 1 cut(s) | 76 |
| MalI | GATC | 2 cut(s) | 162, 226 |
| MboI | GATC | 2 cut(s) | 160, 224 |
| MlsI | TGGCCA | 1 cut(s) | 124 |
| MluNI | TGGCCA | 1 cut(s) | 124 |
| MmeI | TCCRAC | 2 cut(s) | 34, 124 |
| MnlI | CCTC | 3 cut(s) | 93, 145, 190 |
| Mox20I | TGGCCA | 1 cut(s) | 124 |
| Mph1103I | ATGCAT | 1 cut(s) | 169 |
| MscI | TGGCCA | 1 cut(s) | 124 |
| Msp20I | TGGCCA | 1 cut(s) | 124 |
| MspR9I | CCNGG | 1 cut(s) | 184 |
| MvaI | CCWGG | 1 cut(s) | 184 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 164, 173 |
| NdeII | GATC | 2 cut(s) | 160, 224 |
| NlaIII | CATG | 3 cut(s) | 70, 167, 237 |
| NsiI | ATGCAT | 1 cut(s) | 169 |
| NspI | RCATGY | 1 cut(s) | 237 |
| PciI | ACATGT | 1 cut(s) | 233 |
| PkrI | GCNGC | 2 cut(s) | 94, 157 |
| Ple19I | CGATCG | 1 cut(s) | 227 |
| PscI | ACATGT | 1 cut(s) | 233 |
| Psp6I | CCWGG | 1 cut(s) | 182 |
| PspGI | CCWGG | 1 cut(s) | 182 |
| PvuI | CGATCG | 1 cut(s) | 227 |
| RsaI | GTAC | 1 cut(s) | 104 |
| RsaNI | GTAC | 1 cut(s) | 103 |
| SatI | GCNGC | 2 cut(s) | 93, 156 |
| Sau3AI | GATC | 2 cut(s) | 160, 224 |
| ScrFI | CCNGG | 1 cut(s) | 184 |
| SetI | ASST | 6 cut(s) | 40, 79, 104, 112, 182, 248 |
| SsiI | CCGC | 5 cut(s) | 92, 95, 155, 158, 190 |
| StyD4I | CCNGG | 1 cut(s) | 182 |
| TaaI | ACNGT | 2 cut(s) | 53, 142 |
| TaiI | ACGT | 1 cut(s) | 79 |
| TaqI | TCGA | 1 cut(s) | 223 |
| TauI | GCSGC | 2 cut(s) | 95, 158 |
| TspDTI | ATGAA | 1 cut(s) | 210 |
| XceI | RCATGY | 1 cut(s) | 237 |
| ZraI | GACGTC | 1 cut(s) | 77 |
| Zsp2I | ATGCAT | 1 cut(s) | 169 |