Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002008

Physical Location & Seq

Genomic Coordinates Forward (+)

63679893 .. 63682430

Gene Structure 2538 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0505500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGGAACGGGTATGCGATCGTCCTGGTGCGACTTCTTTTCTGTGCGCTATCTTATACTCTTGTTGCTCATTAACGTTGCATGCTGTTTTTCTTTTGTACAGACGCCCAATTGTTCAAGAGCTCCATGCCAAAGAGTCAAAGACACTACATTAGTAAAAAGTAAAACTGATTTAGAATCTAATTACATTCCCACTCGGTCATATGAGATGCAGACACTTTGCCATGATGATGAGCGCTCTGCCTTGTTACAATTCAAAGCTAGTTTCACTATAGACAAGTCTGCTTCCCAAGATCCCTTTGCTTATCCGAAAGTTGCATCCTGGGGGAGTCTAGAAGGAGATCCTAAAAGGAGTAACTGTTGTTCATGGGATGGTGTTGAATGCAACGACAATTCGGGCCACGTTATTGGCCTTGACCTTGCCAGTAGCTGGCTTCATGGTTCCATCAACTCCAATAGCAGTCTTTTTCAACTTGTTCAGTTGCAGAGGCTTGACCTCTCTGACAATAACTTCAGCTTCTCTCAAATACCATCCAGGTTAGGCCATGATCTTACTAGTCTAACATATCTCAATCTTTCAATGTCTTCATTTTCTGGCCAAATTCCTTCCGAAATTTCATATCTATCCAAGCTATCTACACTTCATCTGTCTTCATATGTGCCTCCTCTAGAAATGCCTCGTCTCAAAATGCCTCCTCTCAAAATGCCCAACTTCAGAATTCTAGTTCAGAACTTAACCAACATAAAACAGCTTCATCTTTTTGACGTCGAGATACGCTCCACAGTGCCTAATACATTGGTGAATATGTCTTCTCTCACATCTCTCCGTCTTCAAGCATGTAAATTGGAGGGGAAATTCCCAGCAAGCGATTTCTCTGGTCATATACCTGCTTCAATCAGAAATCTTCGTGCCTTGCATTTGTTGAACATACGATCCTGTAACTTTTATCCCCATGTTCCATCTTCACTTTCCAACGTTACCCAGCTCAATTTCCTTGATCTTTCTTCCTTTTATGACTATAGTTATCTACCTGACCTTCCAACAATCCATACTTTCAGTGGCCAAGTTTCAGATTTCTTGTCTTGGGTTGGAAAGCTGACCAAACTTAACCACTTGTCCCTTGATGGTACCTACTTAAGGGGAGATTTGCCATGTTCTTTGGCTACTCTGACTCAACTTTTGGTATTAGACTTGAACCAGAATCTAATAACTGGTGAAATCCCATGTTGTTTGGCTAATTTGACACAACTTTTGAAATTAGACTTGGGCCGCAATCAAATAACCGGTCAAATCCCATCTTGCCTTGTGCAGCTGAGCCAATTAACTTTGTTAGACGTACGATTCAACAATCTGCAAGGAGCAATTCCCAGGTCACTATTCGACCTAAGATACCTTAAACATATTTACCTCCACTCAAATAACTTGAGTGGGTCTGTTGAATTGGACGAGTTTTCCAAGCTCAAAAAGTTGCGAGGACTTCGTTTGTCGCTCAACAAGTTCTCTGTGCAGATCAAAACTGGATTTAATGCTATTGCTCCAAAGCTTGAAGTACTAGGATTGGGTTCATGCAACTTAATGGAGTTTCCGGAATTTTTGAAATACACTAGTCAACTGGAGGATCTAGATCTATCTGACAACAATCTTCATGGCCATATACCAAAATGGATGTGGAATTCAACTGGTGAAACTTTGAGGTTTCTCAACCTCTCTCACAACCACTTAACTGGATTTGAAGAAAATCCGGTCATTATTCCATGGCGTGGGTTATACTCTTTACAGCTCGACTCTAACATGTTACGAGGATCACTGCCAATTCCATCGCCGTCAATATCATACTATTTTGTTTCAAACAATGAATATGCAGGAGAAATTCCAGCAACATTCTGCAACACATGGCCACTATGTATTCTTGATTTGTCTAACAACAACCTGATTGGCAAGATTCCCCAATGTTTTGATAATCTCAGATTTCTTCAGATATTGAGACTGCAGAACAATTCTTTTCATGGGGATATTCCTCAGATAGGTTCAAAAAGATGCTTGTGGTTAAGAGGGATTGACTTGAGTTATAATCAGCTACAAGGGAAGCTACCAAGATCAATTGCCAATTGTTCTAAGTTGTTGTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

RRP7

Protein Analysis

709

Amino Acids

79.83

Weight (kDa)

8.14

Isoelectric Point (pI)

44.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	75 - 129	8.7e-09	Leucine rich repeat N-terminal domain
LRR_14	PF23598	151 - 278	9.9e-07	Leucine-rich repeat region
LRR_14	PF23598	389 - 573	1e-08	Leucine-rich repeat region
LRR_8	PF13855	440 - 499	5.9e-07	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002008)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38720 AT5G38720 AT5G38720
fragaria_vesca	FvH4_6g45790 FvH4_6g45790 FvH4_6g45790 FvH4_6g45790
malus_domestica	MD09G1079700.v1.1 MD17G1070200.v1.1
prunus_persica	Prupe.3G244000_v2.0.a1
pyrus_communis	pycom09g00650 pycom17g07020
rosa_chinensis	RchiOBHm_Chr2g0163971
rosa_laevigata	RLG00000000862 RLG00000001697 RLG00000008129 RLG00000008131 RLG00000013806 RLG00000014188 RLG00000021430
rosa_multiflora	Rmu_sc0002577.1_g000001 Rmu_sc0028598.1_g000001 Rmu_ssc0000432.1_g000022
rosa_roxburghii	Rroxscaffold_1G00074010 Rroxscaffold_2G00086880 Rroxscaffold_5G00353940
rosa_rugosa	Rorug02G0505300 Rorug02G0505400 Rorug02G0505500 Rorug02G0505600 Rorug02G0505700 Rorug02G0505800 Rorug04G0195700
rosa_samantha	Rh2AG391800 Rh2AG573900 Rh2BG584700 Rh2CG555600 Rh2DG594000 Rh4AG031000 Rh5BG452800 Rh6AG080600 Rh6CG040800 Rh6CG095900 Rh6DG018800
rosa_wichuraiana	Rw2G047470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2070
AatII	GACGTC	1 cut(s)	768
Acc36I	ACCTGC	1 cut(s)	895
Acc65I	GGTACC	1 cut(s)	1127
AccB1I	GGYRCC	1 cut(s)	1127
AccB7I	CCANNNNNTGG	2 cut(s)	429, 1760
AccIII	TCCGGA	1 cut(s)	1585
AciI	CCGC	1 cut(s)	1270
AclI	AACGTT	2 cut(s)	75, 975
AclWI	GGATC	5 cut(s)	287, 335, 927, 1626, 1810
AcoI	YGGCCR	4 cut(s)	595, 1060, 1648, 1895
AcsI	RAATTY	7 cut(s)	600, 612, 717, 854, 1589, 1672, 1869
AcuI	CTGAAG	3 cut(s)	496, 697, 1958
AcyI	GRCGYC	2 cut(s)	104, 765
AfaI	GTAC	4 cut(s)	99, 1129, 1338, 1551
AfeI	AGCGCT	1 cut(s)	236
AfiI	CCNNNNNNNGG	4 cut(s)	429, 1137, 1760, 2024
AflII	CTTAAG	1 cut(s)	1135
AflIII	ACRYGT	1 cut(s)	1791
AgeI	ACCGGT	1 cut(s)	1283
AhlI	ACTAGT	2 cut(s)	554, 1604
AjnI	CCWGG	4 cut(s)	23, 320, 533, 1367
AjuI	GAANNNNNNNTTGG	2 cut(s)	1247, 1279
AloI	GAACNNNNNNTCC	2 cut(s)	917, 949
Alw21I	GWGCWC	1 cut(s)	124
Alw26I	GTCTC	2 cut(s)	686, 1978
AlwI	GGATC	5 cut(s)	287, 335, 927, 1626, 1810
AlwNI	CAGNNNCTG	1 cut(s)	429
Aor13HI	TCCGGA	1 cut(s)	1585
Aor51HI	AGCGCT	1 cut(s)	236
AoxI	GGCC	8 cut(s)	397, 409, 541, 595, 1060, 1267, 1648, 1895
ApeKI	GCWGC	1 cut(s)	1309
ApoI	RAATTY	7 cut(s)	600, 612, 717, 854, 1589, 1672, 1869
ArsI	GACNNNNNNTTYG	6 cut(s)	1162, 1194, 1234, 1266, 1270, 1302
AsiGI	ACCGGT	1 cut(s)	1283
Asp718I	GGTACC	1 cut(s)	1127
AspLEI	GCGC	2 cut(s)	48, 237
AspS9I	GGNCC	2 cut(s)	397, 1267
AsuHPI	GGTGA	3 cut(s)	811, 1226, 1694
BalI	TGGCCA	4 cut(s)	597, 1062, 1650, 1897
BanI	GGYRCC	1 cut(s)	1127
BanII	GRGCYC	1 cut(s)	124
BbsI	GAAGAC	4 cut(s)	576, 642, 801, 821
Bbv12I	GWGCWC	1 cut(s)	124
BbvI	GCAGC	1 cut(s)	1321
BccI	CCATC	7 cut(s)	365, 452, 538, 967, 1118, 1303, 1825
BceAI	ACGGC	1 cut(s)	1807
BciT130I	CCWGG	4 cut(s)	25, 322, 535, 1369
BcoDI	GTCTC	2 cut(s)	686, 1978
BcuI	ACTAGT	2 cut(s)	554, 1604
BfaI	CTAG	8 cut(s)	261, 332, 555, 668, 722, 1553, 1605, 1622
BfmI	CTRYAG	3 cut(s)	270, 1018, 1988
BfoI	RGCGCY	1 cut(s)	238
BfrI	CTTAAG	1 cut(s)	1135
BfuAI	ACCTGC	1 cut(s)	895
BglII	AGATCT	1 cut(s)	1624
BisI	GCNGC	2 cut(s)	1270, 1310
BlpI	GCTNAGC	1 cut(s)	1313
BlsI	GCNGC	2 cut(s)	1271, 1311
BmcAI	AGTACT	1 cut(s)	1551
Bme1390I	CCNGG	4 cut(s)	25, 322, 535, 1369
BmgT120I	GGNCC	2 cut(s)	397, 1267
BmiI	GGNNCC	2 cut(s)	442, 1129
BmrFI	CCNGG	4 cut(s)	25, 322, 535, 1369
BmsI	GCATC	3 cut(s)	198, 326, 2027
BpiI	GAAGAC	4 cut(s)	576, 642, 801, 821
BplI	GAGNNNNNCTC	2 cut(s)	761, 793
BpmI	CTGGAG	1 cut(s)	1634
Bpu1102I	GCTNAGC	1 cut(s)	1313
BpuEI	CTTGAG	2 cut(s)	1444, 2083
BsaBI	GATNNNNATC	1 cut(s)	1623
BsaHI	GRCGYC	2 cut(s)	104, 765
BsaJI	CCNNGG	3 cut(s)	321, 1367, 1754
BsaWI	WCCGGW	3 cut(s)	1283, 1585, 1741
BsaXI	ACNNNNNCTCC	2 cut(s)	343, 373
Bsc4I	CCNNNNNNNGG	4 cut(s)	429, 1137, 1760, 2024
Bse118I	RCCGGY	1 cut(s)	1283
Bse1I	ACTGG	6 cut(s)	423, 1216, 1522, 1617, 1684, 1729
Bse8I	GATNNNNATC	1 cut(s)	1623
BseAI	TCCGGA	1 cut(s)	1585
BseBI	CCWGG	4 cut(s)	25, 322, 535, 1369
BseDI	CCNNGG	3 cut(s)	321, 1367, 1754
BseGI	GGATG	4 cut(s)	317, 376, 530, 1671
BseJI	GATNNNNATC	1 cut(s)	1623
BseLI	CCNNNNNNNGG	4 cut(s)	429, 1137, 1760, 2024
BseMII	CTCAG	3 cut(s)	1304, 1978, 2033
BseNI	ACTGG	6 cut(s)	423, 1216, 1522, 1617, 1684, 1729
BseRI	GAGGAG	2 cut(s)	654, 684
BseXI	GCAGC	1 cut(s)	1321
BseYI	CCCAGC	2 cut(s)	859, 981
BsgI	GTGCAG	2 cut(s)	1328, 1526
Bsh1285I	CGRYCG	1 cut(s)	20
BshFI	GGCC	8 cut(s)	399, 411, 543, 597, 1062, 1269, 1650, 1897
BshNI	GGYRCC	1 cut(s)	1127
BshTI	ACCGGT	1 cut(s)	1283
BsiEI	CGRYCG	1 cut(s)	20
BsiHKAI	GWGCWC	1 cut(s)	124
BsiSI	CCGG	3 cut(s)	1284, 1586, 1742
BsiWI	CGTACG	1 cut(s)	1336
BslFI	GGGAC	1 cut(s)	1102
BslI	CCNNNNNNNGG	4 cut(s)	429, 1137, 1760, 2024
BsmAI	GTCTC	2 cut(s)	686, 1978
BsmBI	CGTCTC	1 cut(s)	686
BsmFI	GGGAC	1 cut(s)	1102
BsmI	GAATGC	1 cut(s)	386
BsnI	GGCC	8 cut(s)	399, 411, 543, 597, 1062, 1269, 1650, 1897
Bsp1286I	GDGCHC	1 cut(s)	124
Bsp13I	TCCGGA	1 cut(s)	1585
Bsp1407I	TGTACA	1 cut(s)	97
Bsp1720I	GCTNAGC	1 cut(s)	1313
Bsp19I	CCATGG	1 cut(s)	1754
BspACI	CCGC	1 cut(s)	1270
BspANI	GGCC	8 cut(s)	399, 411, 543, 597, 1062, 1269, 1650, 1897
BspCNI	CTCAG	3 cut(s)	1305, 1977, 2032
BspEI	TCCGGA	1 cut(s)	1585
BspLI	GGNNCC	2 cut(s)	442, 1129
BspMAI	CTGCAG	1 cut(s)	1992
BspMI	ACCTGC	1 cut(s)	895
BspPI	GGATC	5 cut(s)	287, 335, 927, 1626, 1810
BspT107I	GGYRCC	1 cut(s)	1127
BspTI	CTTAAG	1 cut(s)	1135
BsrFI	RCCGGY	1 cut(s)	1283
BsrGI	TGTACA	1 cut(s)	97
BsrI	ACTGG	6 cut(s)	423, 1216, 1522, 1617, 1684, 1729
BssAI	RCCGGY	1 cut(s)	1283
BssECI	CCNNGG	3 cut(s)	321, 1367, 1754
BssNI	GRCGYC	2 cut(s)	104, 765
BssT1I	CCWWGG	1 cut(s)	1754
Bst2UI	CCWGG	4 cut(s)	25, 322, 535, 1369
Bst4CI	ACNGT	2 cut(s)	359, 784
BstACI	GRCGYC	2 cut(s)	104, 765
BstAFI	CTTAAG	1 cut(s)	1135
BstAUI	TGTACA	1 cut(s)	97
BstC8I	GCNNGC	3 cut(s)	82, 431, 865
BstDEI	CTNAG	5 cut(s)	1313, 1385, 1964, 2019, 2115
BstDSI	CCRYGG	1 cut(s)	1754
BstENI	CCTNNNNNAGG	2 cut(s)	1135, 2022
BstF5I	GGATG	4 cut(s)	317, 376, 530, 1671
BstH2I	RGCGCY	1 cut(s)	238
BstHHI	GCGC	2 cut(s)	48, 237
BstMAI	GTCTC	2 cut(s)	686, 1978
BstMCI	CGRYCG	1 cut(s)	20
BstNI	CCWGG	4 cut(s)	25, 322, 535, 1369
BstNSI	RCATGY	3 cut(s)	84, 840, 1795
BstSCI	CCNGG	4 cut(s)	23, 320, 533, 1367
BstSFI	CTRYAG	3 cut(s)	270, 1018, 1988
BstV1I	GCAGC	1 cut(s)	1321
BstV2I	GAAGAC	4 cut(s)	576, 642, 801, 821
BstX2I	RGATCY	4 cut(s)	292, 340, 1618, 1624
BstXI	CCANNNNNNTGG	2 cut(s)	407, 1724
BstYI	RGATCY	4 cut(s)	292, 340, 1618, 1624
BsuRI	GGCC	8 cut(s)	399, 411, 543, 597, 1062, 1269, 1650, 1897
BtgI	CCRYGG	1 cut(s)	1754
BtgZI	GCGATG	1 cut(s)	1803
BtsCI	GGATG	4 cut(s)	317, 376, 530, 1671
BtsI	GCAGTG	1 cut(s)	1805
BtsIMutI	CAGTG	3 cut(s)	789, 1063, 1805
BveI	ACCTGC	1 cut(s)	895
Cac8I	GCNNGC	3 cut(s)	82, 431, 865
CaiI	CAGNNNCTG	1 cut(s)	429
CfoI	GCGC	2 cut(s)	48, 237
Cfr10I	RCCGGY	1 cut(s)	1283
Cfr13I	GGNCC	2 cut(s)	397, 1267
CseI	GACGC	1 cut(s)	112
Csp6I	GTAC	4 cut(s)	98, 1128, 1337, 1550
CspAI	ACCGGT	1 cut(s)	1283
CviQI	GTAC	4 cut(s)	98, 1128, 1337, 1550
DdeI	CTNAG	5 cut(s)	1313, 1385, 1964, 2019, 2115
EaeI	YGGCCR	4 cut(s)	595, 1060, 1648, 1895
Ecl136II	GAGCTC	1 cut(s)	122
Eco130I	CCWWGG	1 cut(s)	1754
Eco24I	GRGCYC	1 cut(s)	124
Eco47III	AGCGCT	1 cut(s)	236
Eco53kI	GAGCTC	1 cut(s)	122
Eco57I	CTGAAG	3 cut(s)	496, 697, 1958
EcoICRI	GAGCTC	1 cut(s)	122
EcoNI	CCTNNNNNAGG	2 cut(s)	1135, 2022
EcoRI	GAATTC	2 cut(s)	717, 1672
EcoRII	CCWGG	4 cut(s)	23, 320, 533, 1367
EcoT14I	CCWWGG	1 cut(s)	1754
EcoT38I	GRGCYC	1 cut(s)	124
ErhI	CCWWGG	1 cut(s)	1754
Esp3I	CGTCTC	1 cut(s)	686
FaqI	GGGAC	1 cut(s)	1102
FauNDI	CATATG	2 cut(s)	202, 655
Fnu4HI	GCNGC	2 cut(s)	1270, 1310
FokI	GGATG	4 cut(s)	304, 383, 517, 1678
FriOI	GRGCYC	1 cut(s)	124
Fsp4HI	GCNGC	2 cut(s)	1270, 1310
FspBI	CTAG	8 cut(s)	261, 332, 555, 668, 722, 1553, 1605, 1622
GlaI	GCGC	2 cut(s)	47, 236
GluI	GCNGC	2 cut(s)	1270, 1310
GsaI	CCCAGC	2 cut(s)	863, 985
GsuI	CTGGAG	1 cut(s)	1634
HaeII	RGCGCY	1 cut(s)	238
HaeIII	GGCC	8 cut(s)	399, 411, 543, 597, 1062, 1269, 1650, 1897
HapII	CCGG	3 cut(s)	1284, 1586, 1742
HgaI	GACGC	1 cut(s)	112
HhaI	GCGC	2 cut(s)	48, 237
Hin1I	GRCGYC	2 cut(s)	104, 765
Hin6I	GCGC	2 cut(s)	46, 235
HinP1I	GCGC	2 cut(s)	46, 235
HincII	GTYRAC	1 cut(s)	1610
HindII	GTYRAC	1 cut(s)	1610
HindIII	AAGCTT	1 cut(s)	1541
HinfI	GANTC	8 cut(s)	135, 176, 328, 1171, 1201, 1341, 1784, 1942
HpaII	CCGG	3 cut(s)	1284, 1586, 1742
HphI	GGTGA	3 cut(s)	811, 1226, 1694
Hpy166II	GTNNAC	1 cut(s)	1610
Hpy188III	TCNNGA	7 cut(s)	117, 332, 668, 769, 1586, 1622, 1910
Hpy8I	GTNNAC	1 cut(s)	1610
Hpy99I	CGWCG	1 cut(s)	770
HpyAV	CCTTC	3 cut(s)	329, 615, 1046
HpyCH4III	ACNGT	2 cut(s)	359, 784
HpyCH4IV	ACGT	5 cut(s)	75, 402, 765, 975, 1335
HpyF3I	CTNAG	5 cut(s)	1313, 1385, 1964, 2019, 2115
HpySE526I	ACGT	5 cut(s)	75, 402, 765, 975, 1335
Hsp92I	GRCGYC	2 cut(s)	104, 765
HspAI	GCGC	2 cut(s)	46, 235
Kpn2I	TCCGGA	1 cut(s)	1585
KpnI	GGTACC	1 cut(s)	1131
LmnI	GCTCC	4 cut(s)	127, 782, 1358, 1540
Lsp1109I	GCAGC	1 cut(s)	1321
LweI	GCATC	3 cut(s)	198, 326, 2027
MaeI	CTAG	8 cut(s)	261, 332, 555, 668, 722, 1553, 1605, 1622
MaeII	ACGT	5 cut(s)	75, 402, 765, 975, 1335
MaeIII	GTNAC	6 cut(s)	246, 353, 938, 976, 1371, 1794
MfeI	CAATTG	3 cut(s)	109, 2100, 2107
MflI	RGATCY	4 cut(s)	292, 340, 1618, 1624
MhlI	GDGCHC	1 cut(s)	124
MlsI	TGGCCA	4 cut(s)	597, 1062, 1650, 1897
MluNI	TGGCCA	4 cut(s)	597, 1062, 1650, 1897
MlyI	GAGTC	4 cut(s)	144, 337, 1165, 1778
MmeI	TCCRAC	3 cut(s)	996, 1064, 1069
Mox20I	TGGCCA	4 cut(s)	597, 1062, 1650, 1897
MroI	TCCGGA	1 cut(s)	1585
MscI	TGGCCA	4 cut(s)	597, 1062, 1650, 1897
MslI	CAYNNNNRTG	1 cut(s)	228
Msp20I	TGGCCA	4 cut(s)	597, 1062, 1650, 1897
MspA1I	CMGCKG	1 cut(s)	1312
MspCI	CTTAAG	1 cut(s)	1135
MspI	CCGG	3 cut(s)	1284, 1586, 1742
MspR9I	CCNGG	4 cut(s)	25, 322, 535, 1369
MunI	CAATTG	3 cut(s)	109, 2100, 2107
Mva1269I	GAATGC	1 cut(s)	386
MvaI	CCWGG	4 cut(s)	25, 322, 535, 1369
NcoI	CCATGG	1 cut(s)	1754
NdeI	CATATG	2 cut(s)	202, 655
NlaIV	GGNNCC	2 cut(s)	442, 1129
NmuCI	GTSAC	1 cut(s)	1371
NspI	RCATGY	3 cut(s)	84, 840, 1795
PaeI	GCATGC	1 cut(s)	84
PciI	ACATGT	1 cut(s)	1791
PctI	GAATGC	1 cut(s)	386
PfeI	GAWTC	4 cut(s)	176, 1201, 1341, 1942
Pfl23II	CGTACG	1 cut(s)	1336
PflMI	CCANNNNNTGG	2 cut(s)	429, 1760
PinAI	ACCGGT	1 cut(s)	1283
PkrI	GCNGC	2 cut(s)	1271, 1311
Ple19I	CGATCG	1 cut(s)	20
PleI	GAGTC	4 cut(s)	143, 336, 1165, 1778
PpsI	GAGTC	4 cut(s)	143, 336, 1165, 1778
PscI	ACATGT	1 cut(s)	1791
PsiI	TTATAA	1 cut(s)	2070
Psp124BI	GAGCTC	1 cut(s)	124
Psp1406I	AACGTT	2 cut(s)	75, 975
Psp6I	CCWGG	4 cut(s)	23, 320, 533, 1367
PspFI	CCCAGC	2 cut(s)	859, 981
PspGI	CCWGG	4 cut(s)	23, 320, 533, 1367
PspLI	CGTACG	1 cut(s)	1336
PspN4I	GGNNCC	2 cut(s)	442, 1129
PspPI	GGNCC	2 cut(s)	397, 1267
PsrI	GAACNNNNNNTAC	2 cut(s)	346, 378
PstI	CTGCAG	1 cut(s)	1992
PstNI	CAGNNNCTG	1 cut(s)	429
PsuI	RGATCY	4 cut(s)	292, 340, 1618, 1624
PvuI	CGATCG	1 cut(s)	20
PvuII	CAGCTG	1 cut(s)	1312
RsaI	GTAC	4 cut(s)	99, 1129, 1338, 1551
RsaNI	GTAC	4 cut(s)	98, 1128, 1337, 1550
RseI	CAYNNNNRTG	1 cut(s)	228
SacI	GAGCTC	1 cut(s)	124
SatI	GCNGC	2 cut(s)	1270, 1310
Sau96I	GGNCC	2 cut(s)	397, 1267
ScaI	AGTACT	1 cut(s)	1551
SchI	GAGTC	4 cut(s)	144, 337, 1165, 1778
ScrFI	CCNGG	4 cut(s)	25, 322, 535, 1369
SduI	GDGCHC	1 cut(s)	124
SfaNI	GCATC	3 cut(s)	198, 326, 2027
SfcI	CTRYAG	3 cut(s)	270, 1018, 1988
SmiMI	CAYNNNNRTG	1 cut(s)	228
SmlI	CTYRAG	3 cut(s)	1135, 1423, 2062
SmoI	CTYRAG	3 cut(s)	1135, 1423, 2062
SpeI	ACTAGT	2 cut(s)	554, 1604
SphI	GCATGC	1 cut(s)	84
SsiI	CCGC	1 cut(s)	1270
SspMI	CTAG	8 cut(s)	261, 332, 555, 668, 722, 1553, 1605, 1622
SstI	GAGCTC	1 cut(s)	124
StyD4I	CCNGG	4 cut(s)	23, 320, 533, 1367
StyI	CCWWGG	1 cut(s)	1754
TaaI	ACNGT	2 cut(s)	359, 784
TaiI	ACGT	5 cut(s)	78, 405, 768, 978, 1338
TaqI	TCGA	3 cut(s)	768, 1380, 1782
TaqII	GACCGA	1 cut(s)	186
TatI	WGTACW	2 cut(s)	97, 1549
TauI	GCSGC	1 cut(s)	1272
TfiI	GAWTC	4 cut(s)	176, 1201, 1341, 1942
TscAI	CASTG	3 cut(s)	789, 1063, 1812
TseFI	GTSAC	1 cut(s)	1371
TseI	GCWGC	1 cut(s)	1309
Tsp45I	GTSAC	1 cut(s)	1371
TspGWI	ACGGA	1 cut(s)	815
TspRI	CASTG	3 cut(s)	789, 1063, 1812
Van91I	CCANNNNNTGG	2 cut(s)	429, 1760
Vha464I	CTTAAG	1 cut(s)	1135
XagI	CCTNNNNNAGG	2 cut(s)	1135, 2022
XapI	RAATTY	7 cut(s)	600, 612, 717, 854, 1589, 1672, 1869
XbaI	TCTAGA	3 cut(s)	331, 667, 1621
XceI	RCATGY	3 cut(s)	84, 840, 1795
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1055, 1665
XspI	CTAG	8 cut(s)	261, 332, 555, 668, 722, 1553, 1605, 1622
ZraI	GACGTC	1 cut(s)	766
ZrmI	AGTACT	1 cut(s)	1551

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.