Ribosomal RNA-processing protein 7 (RRP7)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G38720 AT5G38720 AT5G38720 |
| fragaria_vesca | FvH4_6g45790 FvH4_6g45790 FvH4_6g45790 FvH4_6g45790 |
| malus_domestica | MD09G1079700.v1.1 MD17G1070200.v1.1 |
| prunus_persica | Prupe.3G244000_v2.0.a1 |
| pyrus_communis | pycom09g00650 pycom17g07020 |
| rosa_chinensis | RchiOBHm_Chr2g0163971 |
| rosa_laevigata | RLG00000000862 RLG00000001697 RLG00000008129 RLG00000008131 RLG00000013806 RLG00000014188 RLG00000021430 |
| rosa_multiflora | Rmu_sc0002577.1_g000001 Rmu_sc0028598.1_g000001 Rmu_ssc0000432.1_g000022 |
| rosa_roxburghii | Rroxscaffold_1G00074010 Rroxscaffold_2G00086880 Rroxscaffold_5G00353940 |
| rosa_rugosa | Rorug02G0505300 Rorug02G0505400 Rorug02G0505500 Rorug02G0505600 Rorug02G0505700 Rorug02G0505800 Rorug04G0195700 |
| rosa_samantha | Rh2AG391800 Rh2AG573900 Rh2BG584700 Rh2CG555600 Rh2DG594000 Rh4AG031000 Rh5BG452800 Rh6AG080600 Rh6CG040800 Rh6CG095900 Rh6DG018800 |
| rosa_wichuraiana | Rw2G047470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 120 |
| AgsI | TTSAA | 2 cut(s) | 182, 187 |
| AluBI | AGCT | 3 cut(s) | 17, 38, 107 |
| AluI | AGCT | 3 cut(s) | 17, 38, 107 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 108 |
| AsuII | TTCGAA | 1 cut(s) | 72 |
| BfaI | CTAG | 1 cut(s) | 39 |
| Bpu14I | TTCGAA | 1 cut(s) | 72 |
| BpuEI | CTTGAG | 1 cut(s) | 139 |
| Bse1I | ACTGG | 1 cut(s) | 93 |
| BseGI | GGATG | 1 cut(s) | 148 |
| BseNI | ACTGG | 1 cut(s) | 93 |
| Bsp119I | TTCGAA | 1 cut(s) | 72 |
| BspT104I | TTCGAA | 1 cut(s) | 72 |
| BsrI | ACTGG | 1 cut(s) | 93 |
| Bst6I | CTCTTC | 1 cut(s) | 139 |
| BstBI | TTCGAA | 1 cut(s) | 72 |
| BstF5I | GGATG | 1 cut(s) | 148 |
| BtsCI | GGATG | 1 cut(s) | 148 |
| BtsIMutI | CAGTG | 1 cut(s) | 144 |
| CviJI | RGCY | 3 cut(s) | 17, 38, 107 |
| CviKI_1 | RGCY | 3 cut(s) | 17, 38, 107 |
| Eam1104I | CTCTTC | 1 cut(s) | 139 |
| EarI | CTCTTC | 1 cut(s) | 139 |
| Eco57I | CTGAAG | 1 cut(s) | 120 |
| FaiI | YATR | 4 cut(s) | 173, 198, 200, 219 |
| FokI | GGATG | 1 cut(s) | 155 |
| FspBI | CTAG | 1 cut(s) | 39 |
| HinfI | GANTC | 2 cut(s) | 58, 65 |
| Hpy166II | GTNNAC | 1 cut(s) | 148 |
| Hpy188III | TCNNGA | 4 cut(s) | 62, 113, 156, 179 |
| Hpy8I | GTNNAC | 1 cut(s) | 148 |
| HpyAV | CCTTC | 2 cut(s) | 68, 79 |
| HpyCH4V | TGCA | 1 cut(s) | 217 |
| LpnPI | CCDG | 1 cut(s) | 74 |
| MaeI | CTAG | 1 cut(s) | 39 |
| MaeIII | GTNAC | 1 cut(s) | 84 |
| MboII | GAAGA | 2 cut(s) | 67, 126 |
| MluCI | AATT | 2 cut(s) | 174, 182 |
| MnlI | CCTC | 1 cut(s) | 15 |
| MroXI | GAANNNNTTC | 1 cut(s) | 108 |
| NspV | TTCGAA | 1 cut(s) | 72 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 69 |
| PdmI | GAANNNNTTC | 1 cut(s) | 108 |
| PfeI | GAWTC | 2 cut(s) | 58, 65 |
| SetI | ASST | 5 cut(s) | 19, 40, 79, 109, 124 |
| SfuI | TTCGAA | 1 cut(s) | 72 |
| SgeI | CNNG | 9 cut(s) | 33, 51, 74, 101, 125, 135, 168, 180, 191 |
| SmlI | CTYRAG | 1 cut(s) | 154 |
| SmoI | CTYRAG | 1 cut(s) | 154 |
| Sse9I | AATT | 2 cut(s) | 174, 182 |
| SspI | AATATT | 1 cut(s) | 224 |
| SspMI | CTAG | 1 cut(s) | 39 |
| TaqI | TCGA | 2 cut(s) | 72, 112 |
| TasI | AATT | 2 cut(s) | 174, 182 |
| TfiI | GAWTC | 2 cut(s) | 58, 65 |
| TscAI | CASTG | 1 cut(s) | 144 |
| TspDTI | ATGAA | 1 cut(s) | 132 |
| TspRI | CASTG | 1 cut(s) | 144 |
| XmnI | GAANNNNTTC | 1 cut(s) | 108 |
| XspI | CTAG | 1 cut(s) | 39 |