Rorug02G0505800

Ribosomal RNA-processing protein 7 (RRP7)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0002008
Physical Location & Seq
Forward (+)
63722438 .. 63726160
3723 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0505800.1

Sequence Viewer

Length: 3054 bp
ATGGGAATGGGAATGGGATCATCCTGGTGCGACTACTTTTCTGTGCGTTATTTTATGCTTTTGTTGCTCATTAATGTTGCATGCTGTTTTTCTTTTGTACAGACGCAGAAACTTTGCCACGATGATGAGCGCTCTGCCTTGTTGCAATTCAAAGCTAGTTTCACTATAGACAAGTCTGTTTCCCAAGATCCCTTTGCTTATCCGAAAGTTGCATCCTGGGGTAGGCTAGAAGGAGATCCTCAAAGGAGTAACTGTTGTTCATGGGATGGTGTTGAATGCAACGACGTATCTGGCCATGTTATTGGCCTTGACCTTGCCAGCAGCTATCTTCATGGTTCCATCAACTCCAATAGCAGTCTTTTTCAACTTGTTCAGTTGCAGAGGCTTGACCTCTCTGACAATAACTTCAGCTTCTCTCAAATACCATCCAGATTAGGCAATGATCTTACTAGTCTAACATATCTCAACCTTTCAATGTCTTCATTTTCTGGCCACATTCCATCAGAAATTTCATATCTATCCAAGCTGTCTGCCCTTGATCTGACTTCTGATTATATGTTGGCTCTTGAAAAGGCCAACTTCAGAAGTCTAATTCAAAATTTAACAGACATAAAACAGCTTCATCTTAGTAAGGTCTCTATACTCTCCACAGTGCCTAATACACTGGTGAATATGTCTTCTCTCACATCTCTCCGTCTTCAAGCATGTAACTTGGAGGGGGAATTCCCAGTAGGCATTTTCCACCTACCAAACTTGCAAGTACTTGATTTGGCCTATAACGATAATCTTACCGGTTATTTTCCTGATTACCTTAACAGGAGCAGTCCCTTGAAGATATTGAATTTGCAGTCAACCAATTTCTCTGGTCATCTGCCTGCTTCAATCGGAGACCTTCATGCCTTAAATTTGTTGAACATATCATCTTGTCACTTTTATCCCCATGTTCCATCTTCACTTTCCAACCTTACCCAGCTCAATTTCCTAGATCTTTCTTCCTTTTATGACTATAGTTATCAACCTGACCTTCCAACAATCCATACTTTTGGTGGCCAAGTTTCAGATTCCTGGTCTTGGGTTGGAAAGCTGACCAATCTCAACCACTTGGTCCTTGTGGATACCAACTTAAGGGGAGATTTGCCATGTTCTTTGGCAAATCTGACTCAACTTTTGGAATTAGACTTGAGCCAGAATCACATAACAGGTGAAATCCCATGTTGTTTGGCTCATCTGACACAACTTTTCAAATTAGACTTGGGCCACAATCAAATAACTGGTCAAATCCCATCTTGCCTTATGCTTTTGACCCAATTAACTTTGTTAGATGTACGATTCAACAATCTCCAAGGAGCAATTCCCAGGTCACTGTTACAGCTTAAAAGTCTTGAATATATTTTCCTCAACTCAAATAACTTGAGTGGATATGTTCAATTCGATGAGTTTTCTAAGCTCAAAAGGTTGAGGGGACTTCGTTTGTCGCTCAACAAGTTATCTGTGCAGATCAAAACTGGATTTACTGCTATTCTTCCGAAGCTTAATTTACTAGAATTGGGTTCATGCAACTTGACAGAGTTTCCGGAATTTTTGAAATTCAGTAGTGAACTGATGCATCTAGATCTATCTGACAACAATCTTCATGGCCAAATACCAAAATGGATGTGGAATTCAACTAGTGAAACGTTGAGATACCTCAACCTCTCTCACAACCACTTAACTGGATTTGAAGAAAATTCGATCATGATTCCATGGCATCGGTTAAGCTCTTTACAGCTAGACTCTAACATGTTACGAGGATCACTGCCAATTCCAGGGCCGTCAATGGCAGTCTATTCTGTTTCAAACAATGAATATGAAGGAGAAATTCCAGCAACATTCTGTAATGCGGGGACGCTAACTATTCTTGATTTGTCTAACAACAACCTGAATGGCAAGATTCCTCAATGTTTTGAGAATTTCGGAGCTCTTCAGATATTGAAACTGCGGAACAATTCTTTTCACGGAGATATTCCTCAAATATGTTCAAACAGATGTACGGAGTTGGCAGCGATTGACTTGAGTTATAATCAGCTACAAGGGAAGCTACCAAGATCAATTGCTAATTGTCCTCAGTTGATGTTTCTTAATTTGGGAAATAATCAGATCAGTGATACCTTCCCTTCTTGGTTAGGAGTGCTTCAACAGTTAAAAATTCTCATTTTGCGGTCCAATATATTTCATGGCATAATTGGAAAGCCTGCAAGTAGCCATGAGTTCCCTAAGCTGTCCATCATTGATTTATCTAGCAATGATTTTTCAGGTCTGTTGCCCTCCAACTACTTAGAGAACTGGAATGCCATGAAATTTGTTGATGAAAACGAGCAAATATACGTCCAATCCGCTGTCATCTTCGGGATGTATCCAGACACGTTCCACTATGATTACCCGATTACAGTTTTTAGCAAAGGTATTCAATTGAAGTATTTCAAGACCCCTTATCTTCTGAGACTCATAGACCTCTCAAGTAACAACTTTGAAGGAGAGATTCCAGGTATCATTGGGAATCTAAGAGGGCTTCATTTGCTCAATCTTTGCAACAACACTCTCACTGGTCCCATCCCCTCTTCTTTGGGGAACTTGACTGCTCTTGAATCATTGGATCTCTCCCTAAATCAGCTCTCAGGAAAGATCCCCAGTGATCTAGCACAACTGACATTCCTTGCATACTTCAATGTATCCCACAATCGTCTCTATGGTTCAATCCCACAAGGTCGACAGTTTGATACATTCCAAGAGGATATGTACCGAGGAAACTCAGGTTTGTGTGGAAAACCTTTGTCAAAGAAATGTGAGGATTCTGAGAGCGCAACACCACAAACAAACTTTCAACGAGACGAAGACTCTGGTTTTCAAATTGAGCTAGATTGGTTTATGGTGCTGCCAGGAGTTGTTACTGGTCTAATAGTTGGAGTGGTTGGGGAAAACTTTTGGACAGCCAAGAAGCATGACTGGTTTATAGAGGCATTCAGCAGGAGGAGTGAGCCGAGAAGCACAAGGCGGAGGAGGCGACTCAGAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
RRP7

Protein Analysis

1017

Amino Acids

114.11

Weight (kDa)

5.88

Isoelectric Point (pI)

42.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 94 2.6e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 115 - 234 2.9e-06 Leucine-rich repeat region
LRR_14 PF23598 250 - 332 1.2e-08 Leucine-rich repeat region
LRR_8 PF13855 364 - 423 3.1e-07 Leucine rich repeat
LRR_14 PF23598 402 - 570 8.1e-09 Leucine-rich repeat region
LRR_8 PF13855 654 - 713 1.7e-07 Leucine rich repeat
LRR_8 PF13855 848 - 908 1.2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2058
AccI GTMKAC 1 cut(s) 2746
AccIII TCCGGA 1 cut(s) 1573
AciI CCGC 5 cut(s) 1880, 1978, 2197, 2373, 3031
AclI AACGTT 1 cut(s) 1676
AclWI GGATC 6 cut(s) 25, 182, 230, 1798, 2640, 2656
AcoI YGGCCR 4 cut(s) 292, 490, 1048, 1636
AcuI CTGAAG 3 cut(s) 391, 565, 1946
AfaI GTAC 5 cut(s) 99, 762, 1326, 2029, 2777
AfeI AGCGCT 1 cut(s) 131
AfiI CCNNNNNNNGG 4 cut(s) 222, 1071, 1125, 1805
AflII CTTAAG 1 cut(s) 1123
AflIII ACRYGT 2 cut(s) 1779, 2400
AgeI ACCGGT 1 cut(s) 791
AhlI ACTAGT 2 cut(s) 449, 1667
AjnI CCWGG 7 cut(s) 23, 215, 1064, 1355, 1804, 2521, 2914
AjuI GAANNNNNNNTTGG 2 cut(s) 1335, 1367
Alw21I GWGCWC 1 cut(s) 1960
Alw26I GTCTC 5 cut(s) 640, 882, 2473, 2726, 2859
AlwI GGATC 6 cut(s) 25, 182, 230, 1798, 2640, 2656
Aor13HI TCCGGA 1 cut(s) 1573
Aor51HI AGCGCT 1 cut(s) 131
AoxI GGCC 9 cut(s) 292, 304, 490, 573, 771, 1048, 1255, 1636, 1808
ApeKI GCWGC 3 cut(s) 321, 2039, 2911
ArsI GACNNNNNNTTYG 4 cut(s) 1150, 1182, 1258, 1290
AseI ATTAAT 1 cut(s) 72
AsiGI ACCGGT 1 cut(s) 791
Asp700I GAANNNNTTC 1 cut(s) 2456
AspLEI GCGC 2 cut(s) 132, 2840
AspS9I GGNCC 5 cut(s) 1105, 1255, 1808, 2199, 2585
AsuHPI GGTGA 2 cut(s) 679, 1214
AvaII GGWCC 3 cut(s) 1105, 2199, 2585
BalI TGGCCA 4 cut(s) 294, 492, 1050, 1638
BanII GRGCYC 1 cut(s) 1960
BbsI GAAGAC 4 cut(s) 471, 669, 689, 2877
Bbv12I GWGCWC 1 cut(s) 1960
BbvI GCAGC 3 cut(s) 333, 2051, 2898
BccI CCATC 8 cut(s) 260, 347, 433, 508, 955, 1291, 2270, 2597
BceAI ACGGC 1 cut(s) 1795
BciT130I CCWGG 7 cut(s) 25, 217, 1066, 1357, 1806, 2523, 2916
BciVI GTATCC 3 cut(s) 1108, 2403, 2719
BcoDI GTCTC 5 cut(s) 640, 882, 2473, 2726, 2859
BcuI ACTAGT 2 cut(s) 449, 1667
BfmI CTRYAG 2 cut(s) 165, 1006
BfoI RGCGCY 1 cut(s) 133
BfrI CTTAAG 1 cut(s) 1123
BfuI GTATCC 3 cut(s) 1108, 2403, 2719
BglII AGATCT 2 cut(s) 985, 1612
BisI GCNGC 3 cut(s) 322, 2040, 2912
BlsI GCNGC 3 cut(s) 323, 2041, 2913
BmcAI AGTACT 1 cut(s) 762
Bme1390I CCNGG 7 cut(s) 25, 217, 1066, 1357, 1806, 2523, 2916
Bme18I GGWCC 3 cut(s) 1105, 2199, 2585
BmgT120I GGNCC 5 cut(s) 1105, 1255, 1808, 2199, 2585
BmiI GGNNCC 2 cut(s) 337, 2587
BmrFI CCNGG 7 cut(s) 25, 217, 1066, 1357, 1806, 2523, 2916
BmrI ACTGGG 2 cut(s) 722, 2661
BmsI GCATC 4 cut(s) 221, 1593, 1615, 1756
BmuI ACTGGG 2 cut(s) 722, 2661
BpiI GAAGAC 4 cut(s) 471, 669, 689, 2877
Bpu10I CCTNAGC 1 cut(s) 2253
BpuEI CTTGAG 4 cut(s) 1201, 1432, 2071, 2479
BsaI GGTCTC 2 cut(s) 640, 882
BsaJI CCNNGG 6 cut(s) 216, 1342, 1355, 1742, 1805, 2779
BsaWI WCCGGW 2 cut(s) 791, 1573
BsaXI ACNNNNNCTCC 2 cut(s) 238, 268
Bsc4I CCNNNNNNNGG 4 cut(s) 222, 1071, 1125, 1805
Bse118I RCCGGY 1 cut(s) 791
Bse3DI GCAATG 2 cut(s) 445, 2287
BseAI TCCGGA 1 cut(s) 1573
BseBI CCWGG 7 cut(s) 25, 217, 1066, 1357, 1806, 2523, 2916
BseDI CCNNGG 6 cut(s) 216, 1342, 1355, 1742, 1805, 2779
BseGI GGATG 7 cut(s) 20, 212, 271, 425, 1659, 2394, 2589
BseLI CCNNNNNNNGG 4 cut(s) 222, 1071, 1125, 1805
BseMI GCAATG 2 cut(s) 445, 2287
BseMII CTCAG 5 cut(s) 2117, 2468, 2667, 2802, 2823
BseRI GAGGAG 2 cut(s) 3022, 3049
BseXI GCAGC 3 cut(s) 333, 2051, 2898
BseYI CCCAGC 1 cut(s) 969
BsgI GTGCAG 1 cut(s) 1514
BshFI GGCC 9 cut(s) 294, 306, 492, 575, 773, 1050, 1257, 1638, 1810
BshTI ACCGGT 1 cut(s) 791
BsiHKAI GWGCWC 1 cut(s) 1960
BsiSI CCGG 2 cut(s) 792, 1574
BslFI GGGAC 4 cut(s) 810, 1476, 1897, 2571
BslI CCNNNNNNNGG 4 cut(s) 222, 1071, 1125, 1805
BsmAI GTCTC 5 cut(s) 640, 882, 2473, 2726, 2859
BsmBI CGTCTC 2 cut(s) 2726, 2859
BsmFI GGGAC 4 cut(s) 810, 1476, 1897, 2571
BsmI GAATGC 3 cut(s) 281, 2332, 2996
BsnI GGCC 9 cut(s) 294, 306, 492, 575, 773, 1050, 1257, 1638, 1810
Bso31I GGTCTC 2 cut(s) 640, 882
Bsp1286I GDGCHC 1 cut(s) 1960
Bsp13I TCCGGA 1 cut(s) 1573
Bsp1407I TGTACA 1 cut(s) 97
Bsp19I CCATGG 1 cut(s) 1742
BspACI CCGC 5 cut(s) 1880, 1978, 2197, 2373, 3031
BspANI GGCC 9 cut(s) 294, 306, 492, 575, 773, 1050, 1257, 1638, 1810
BspCNI CTCAG 5 cut(s) 2116, 2469, 2666, 2801, 2824
BspEI TCCGGA 1 cut(s) 1573
BspHI TCATGA 1 cut(s) 1734
BspLI GGNNCC 2 cut(s) 337, 2587
BspPI GGATC 6 cut(s) 25, 182, 230, 1798, 2640, 2656
BspQI GCTCTTC 1 cut(s) 1965
BspTI CTTAAG 1 cut(s) 1123
BspTNI GGTCTC 2 cut(s) 640, 882
BsrDI GCAATG 2 cut(s) 445, 2287
BsrFI RCCGGY 1 cut(s) 791
BsrGI TGTACA 1 cut(s) 97
BssAI RCCGGY 1 cut(s) 791
BssECI CCNNGG 6 cut(s) 216, 1342, 1355, 1742, 1805, 2779
BssT1I CCWWGG 2 cut(s) 1342, 1742
Bst2UI CCWGG 7 cut(s) 25, 217, 1066, 1357, 1806, 2523, 2916
Bst4CI ACNGT 6 cut(s) 254, 652, 1365, 2178, 2428, 2751
Bst6I CTCTTC 2 cut(s) 1965, 2602
BstAFI CTTAAG 1 cut(s) 1123
BstAUI TGTACA 1 cut(s) 97
BstC8I GCNNGC 4 cut(s) 82, 319, 876, 2232
BstDSI CCRYGG 1 cut(s) 1742
BstENI CCTNNNNNAGG 1 cut(s) 220
BstF5I GGATG 7 cut(s) 20, 212, 271, 425, 1659, 2394, 2589
BstH2I RGCGCY 1 cut(s) 133
BstHHI GCGC 2 cut(s) 132, 2840
BstMAI GTCTC 5 cut(s) 640, 882, 2473, 2726, 2859
BstMWI GCNNNNNNNGC 3 cut(s) 64, 2554, 3037
BstNI CCWGG 7 cut(s) 25, 217, 1066, 1357, 1806, 2523, 2916
BstNSI RCATGY 3 cut(s) 84, 708, 1783
BstSCI CCNGG 7 cut(s) 23, 215, 1064, 1355, 1804, 2521, 2914
BstSFI CTRYAG 2 cut(s) 165, 1006
BstV1I GCAGC 3 cut(s) 333, 2051, 2898
BstV2I GAAGAC 4 cut(s) 471, 669, 689, 2877
BstX2I RGATCY 6 cut(s) 187, 235, 985, 1612, 2632, 2661
BstXI CCANNNNNNTGG 3 cut(s) 302, 1043, 1712
BstYI RGATCY 6 cut(s) 187, 235, 985, 1612, 2632, 2661
BsuI GTATCC 3 cut(s) 1108, 2403, 2719
BsuRI GGCC 9 cut(s) 294, 306, 492, 575, 773, 1050, 1257, 1638, 1810
BtgI CCRYGG 1 cut(s) 1742
BtsCI GGATG 7 cut(s) 20, 212, 271, 425, 1659, 2394, 2589
BtsI GCAGTG 1 cut(s) 1793
BtsIMutI CAGTG 7 cut(s) 657, 662, 1361, 1793, 2146, 2580, 2674
Cac8I GCNNGC 4 cut(s) 82, 319, 876, 2232
CciI TCATGA 1 cut(s) 1734
CfoI GCGC 2 cut(s) 132, 2840
Cfr10I RCCGGY 1 cut(s) 791
Cfr13I GGNCC 5 cut(s) 1105, 1255, 1808, 2199, 2585
CseI GACGC 2 cut(s) 112, 1894
Csp6I GTAC 5 cut(s) 98, 761, 1325, 2028, 2776
CspAI ACCGGT 1 cut(s) 791
CviQI GTAC 5 cut(s) 98, 761, 1325, 2028, 2776
EaeI YGGCCR 4 cut(s) 292, 490, 1048, 1636
Eam1104I CTCTTC 2 cut(s) 1965, 2602
EarI CTCTTC 2 cut(s) 1965, 2602
EciI GGCGGA 1 cut(s) 3046
Ecl136II GAGCTC 1 cut(s) 1958
Eco130I CCWWGG 2 cut(s) 1342, 1742
Eco24I GRGCYC 1 cut(s) 1960
Eco31I GGTCTC 2 cut(s) 640, 882
Eco47I GGWCC 3 cut(s) 1105, 2199, 2585
Eco47III AGCGCT 1 cut(s) 131
Eco53kI GAGCTC 1 cut(s) 1958
Eco57I CTGAAG 3 cut(s) 391, 565, 1946
EcoICRI GAGCTC 1 cut(s) 1958
EcoNI CCTNNNNNAGG 1 cut(s) 220
EcoRI GAATTC 2 cut(s) 722, 1660
EcoRII CCWGG 7 cut(s) 23, 215, 1064, 1355, 1804, 2521, 2914
EcoT14I CCWWGG 2 cut(s) 1342, 1742
EcoT22I ATGCAT 1 cut(s) 1608
EcoT38I GRGCYC 1 cut(s) 1960
ErhI CCWWGG 2 cut(s) 1342, 1742
Esp3I CGTCTC 2 cut(s) 2726, 2859
FalI AAGNNNNNCTT 2 cut(s) 563, 595
FaqI GGGAC 4 cut(s) 810, 1476, 1897, 2571
FauI CCCGC 1 cut(s) 1873
FblI GTMKAC 1 cut(s) 2746
Fnu4HI GCNGC 3 cut(s) 322, 2040, 2912
FokI GGATG 7 cut(s) 7, 199, 278, 412, 1666, 2401, 2576
FriOI GRGCYC 1 cut(s) 1960
Fsp4HI GCNGC 3 cut(s) 322, 2040, 2912
GlaI GCGC 2 cut(s) 131, 2839
GluI GCNGC 3 cut(s) 322, 2040, 2912
GsaI CCCAGC 1 cut(s) 973
HaeII RGCGCY 1 cut(s) 133
HaeIII GGCC 9 cut(s) 294, 306, 492, 575, 773, 1050, 1257, 1638, 1810
HapII CCGG 2 cut(s) 792, 1574
HgaI GACGC 2 cut(s) 112, 1894
HhaI GCGC 2 cut(s) 132, 2840
Hin6I GCGC 2 cut(s) 130, 2838
HinP1I GCGC 2 cut(s) 130, 2838
HincII GTYRAC 2 cut(s) 852, 2747
HindII GTYRAC 2 cut(s) 852, 2747
HindIII AAGCTT 1 cut(s) 1529
HpaII CCGG 2 cut(s) 792, 1574
HphI GGTGA 2 cut(s) 679, 1214
Hpy166II GTNNAC 3 cut(s) 852, 1598, 2747
Hpy8I GTNNAC 3 cut(s) 852, 1598, 2747
Hpy99I CGWCG 1 cut(s) 287
HpyAV CCTTC 7 cut(s) 224, 902, 1034, 1844, 2158, 2163, 2504
HpyCH4III ACNGT 6 cut(s) 254, 652, 1365, 2178, 2428, 2751
HpyCH4IV ACGT 4 cut(s) 285, 1676, 2364, 2402
HpyF10VI GCNNNNNNNGC 3 cut(s) 64, 2554, 3037
HpySE526I ACGT 4 cut(s) 285, 1676, 2364, 2402
HspAI GCGC 2 cut(s) 130, 2838
Kpn2I TCCGGA 1 cut(s) 1573
LguI GCTCTTC 1 cut(s) 1965
LmnI GCTCC 3 cut(s) 819, 1346, 1955
Lsp1109I GCAGC 3 cut(s) 333, 2051, 2898
LweI GCATC 4 cut(s) 221, 1593, 1615, 1756
MaeII ACGT 4 cut(s) 285, 1676, 2364, 2402
MaeIII GTNAC 8 cut(s) 248, 707, 926, 1359, 1365, 1782, 2498, 2923
MfeI CAATTG 2 cut(s) 2088, 2447
MflI RGATCY 6 cut(s) 187, 235, 985, 1612, 2632, 2661
MhlI GDGCHC 1 cut(s) 1960
MlsI TGGCCA 4 cut(s) 294, 492, 1050, 1638
MluNI TGGCCA 4 cut(s) 294, 492, 1050, 1638
MlyI GAGTC 5 cut(s) 1153, 1766, 2475, 2867, 3036
MmeI TCCRAC 5 cut(s) 984, 1052, 1057, 2331, 2920
Mox20I TGGCCA 4 cut(s) 294, 492, 1050, 1638
Mph1103I ATGCAT 1 cut(s) 1608
MroI TCCGGA 1 cut(s) 1573
MroXI GAANNNNTTC 1 cut(s) 2456
MscI TGGCCA 4 cut(s) 294, 492, 1050, 1638
MslI CAYNNNNRTG 2 cut(s) 25, 123
Msp20I TGGCCA 4 cut(s) 294, 492, 1050, 1638
MspA1I CMGCKG 1 cut(s) 2375
MspCI CTTAAG 1 cut(s) 1123
MspI CCGG 2 cut(s) 792, 1574
MspR9I CCNGG 7 cut(s) 25, 217, 1066, 1357, 1806, 2523, 2916
MunI CAATTG 2 cut(s) 2088, 2447
Mva1269I GAATGC 3 cut(s) 281, 2332, 2996
MvaI CCWGG 7 cut(s) 25, 217, 1066, 1357, 1806, 2523, 2916
MwoI GCNNNNNNNGC 3 cut(s) 64, 2554, 3037
NcoI CCATGG 1 cut(s) 1742
NlaIV GGNNCC 2 cut(s) 337, 2587
NmeAIII GCCGAG 1 cut(s) 3042
NmuCI GTSAC 2 cut(s) 926, 1359
NsiI ATGCAT 1 cut(s) 1608
NspI RCATGY 3 cut(s) 84, 708, 1783
PaeI GCATGC 1 cut(s) 84
PagI TCATGA 1 cut(s) 1734
PciI ACATGT 1 cut(s) 1779
PciSI GCTCTTC 1 cut(s) 1965
PctI GAATGC 3 cut(s) 281, 2332, 2996
PdmI GAANNNNTTC 1 cut(s) 2456
PfeI GAWTC 9 cut(s) 1061, 1189, 1329, 1738, 1930, 2518, 2536, 2624, 2828
PinAI ACCGGT 1 cut(s) 791
PkrI GCNGC 3 cut(s) 323, 2041, 2913
PleI GAGTC 5 cut(s) 1153, 1766, 2475, 2867, 3036
PpsI GAGTC 5 cut(s) 1153, 1766, 2475, 2867, 3036
PscI ACATGT 1 cut(s) 1779
PshBI ATTAAT 1 cut(s) 72
PsiI TTATAA 1 cut(s) 2058
Psp124BI GAGCTC 1 cut(s) 1960
Psp1406I AACGTT 1 cut(s) 1676
Psp6I CCWGG 7 cut(s) 23, 215, 1064, 1355, 1804, 2521, 2914
PspFI CCCAGC 1 cut(s) 969
PspGI CCWGG 7 cut(s) 23, 215, 1064, 1355, 1804, 2521, 2914
PspN4I GGNNCC 2 cut(s) 337, 2587
PspPI GGNCC 5 cut(s) 1105, 1255, 1808, 2199, 2585
PsrI GAACNNNNNNTAC 2 cut(s) 241, 273
PsuI RGATCY 6 cut(s) 187, 235, 985, 1612, 2632, 2661
RsaI GTAC 5 cut(s) 99, 762, 1326, 2029, 2777
RsaNI GTAC 5 cut(s) 98, 761, 1325, 2028, 2776
RseI CAYNNNNRTG 2 cut(s) 25, 123
SacI GAGCTC 1 cut(s) 1960
SalI GTCGAC 1 cut(s) 2745
SapI GCTCTTC 1 cut(s) 1965
SatI GCNGC 3 cut(s) 322, 2040, 2912
Sau96I GGNCC 5 cut(s) 1105, 1255, 1808, 2199, 2585
ScaI AGTACT 1 cut(s) 762
SchI GAGTC 5 cut(s) 1153, 1766, 2475, 2867, 3036
ScrFI CCNGG 7 cut(s) 25, 217, 1066, 1357, 1806, 2523, 2916
SduI GDGCHC 1 cut(s) 1960
SfaNI GCATC 4 cut(s) 221, 1593, 1615, 1756
SfcI CTRYAG 2 cut(s) 165, 1006
SinI GGWCC 3 cut(s) 1105, 2199, 2585
SmiMI CAYNNNNRTG 2 cut(s) 25, 123
SmlI CTYRAG 5 cut(s) 1123, 1180, 1411, 2050, 2494
SmoI CTYRAG 5 cut(s) 1123, 1180, 1411, 2050, 2494
SpeI ACTAGT 2 cut(s) 449, 1667
SphI GCATGC 1 cut(s) 84
SsiI CCGC 5 cut(s) 1880, 1978, 2197, 2373, 3031
SstI GAGCTC 1 cut(s) 1960
StyD4I CCNGG 7 cut(s) 23, 215, 1064, 1355, 1804, 2521, 2914
StyI CCWWGG 2 cut(s) 1342, 1742
TaaI ACNGT 6 cut(s) 254, 652, 1365, 2178, 2428, 2751
TaiI ACGT 4 cut(s) 288, 1679, 2367, 2405
TaqI TCGA 3 cut(s) 1431, 1730, 2746
TatI WGTACW 2 cut(s) 97, 760
TfiI GAWTC 9 cut(s) 1061, 1189, 1329, 1738, 1930, 2518, 2536, 2624, 2828
TscAI CASTG 7 cut(s) 657, 669, 1368, 1800, 2146, 2587, 2674
TseFI GTSAC 2 cut(s) 926, 1359
TseI GCWGC 3 cut(s) 321, 2039, 2911
Tsp45I GTSAC 2 cut(s) 926, 1359
TspGWI ACGGA 3 cut(s) 683, 2010, 2045
TspRI CASTG 7 cut(s) 657, 669, 1368, 1800, 2146, 2587, 2674
Vha464I CTTAAG 1 cut(s) 1123
VpaK11BI GGWCC 3 cut(s) 1105, 2199, 2585
VspI ATTAAT 1 cut(s) 72
XagI CCTNNNNNAGG 1 cut(s) 220
XbaI TCTAGA 1 cut(s) 1609
XceI RCATGY 3 cut(s) 84, 708, 1783
XcmI CCANNNNNNNNNTGG 2 cut(s) 1043, 1653
XmiI GTMKAC 1 cut(s) 2746
XmnI GAANNNNTTC 1 cut(s) 2456
ZrmI AGTACT 1 cut(s) 762
Zsp2I ATGCAT 1 cut(s) 1608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.