Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003327

Physical Location & Seq

Genomic Coordinates Forward (+)

60164323 .. 60165748

Gene Structure 1426 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0445500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1059 bp

ATGAACAAAAGCAGTTCGGCTTCGTCATTGGGCCCTGGAGGCCTTGACCTAACCCAGGCCTTCTTCAGGCCCATCAGCCGCGCAGCCCCGCCTTCCCCGACCAAGCGCCACAACAAAATCTCCGTCATTGGCGCCGGCAACGTCGGCATGGCCATAGCACAAACCATATTAACCCAAGACCTCGCCGACGAGCTTGTCCTCGTCGACGCCAAACCTGAAAAGCTACGTGGAGAGATGCTGGACCTTCAACACGCAGCTGCCTTCTTACCCCGCACCAAAATCCACGCCTCCGTGGACTACGCCGTCACCGTCGGATCCGACCTCTGCATTGTGACGGCCGGTGCGCGCCAGAACCCGGGTGAGTCCAGGCTGAACCTGCTGCAGAGGAACGTGGCTCTCTTTAGAAATATCATACCTCCACTAGCTAAGTACTCTCCGGACACCATATTACTCATCGTGTCCAATCCGGTGGATGTCCTGACTTACGTGGCGTGGAAGCTATCCGGATTTCCGAGCAACAGGGTTTTCGGGTCGGGTACGAATCTCGACTCATCTAGGTTTCGGTTCCTCATGGCCGATCACCTGGACGTTAACGCTCAGGATGTGCAGGCTTACATTGTTGGGGAGCACGGGGACAGCTCAGTGGCTTTGTGGTCAAGCATTAGCGTCGGGGGAGTGCCGGTGTTGAGCTTCCTAGAGAAGCAGCAAATAGCATACGAGAAAGAGACACTGGAGAAGATTCACAAAGCAGTTGTGGACTGTGCGTATGAGGTGATAAGCCTGAAAGGGTATACTTCATGGGCAATTGGTTACTCAGTGGCAAACCTAGCCCGGAGCATAATCAGAGACCAGAGGAAGGTCCAACCTGTTTCAGTGCTTGCGAATGGGTTCTACGGCGTTGGTGGCGGTGATGTGTTCTTGAGCTTGCCTGCACAGCTCGGAAGGAGTGGAGTTCTGGGAGTGACCAATGTGCATTTGACTGATGAGGAGGCACAGAAGCTAAGGGACTCGGCTCACACCATTTTGGAGGTCCAAAGTCAGTTAAACTTGGGAATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04140 ko04142 ko04145 ko04210 ko04612 ko05205 ko05323 ko05418 map04140 map04142 map04145 map04210 map04612 map05205 map05323 map05418

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

352

Amino Acids

37.86

Weight (kDa)

7.1

Isoelectric Point (pI)

37.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ldh_1_N	PF00056	39 - 177	4.9e-45	lactate/malate dehydrogenase, NAD binding domain
Ldh_1_C	PF02866	180 - 343	1.9e-31	lactate/malate dehydrogenase, alpha/beta C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003327)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g12600 FvH4_4g12601
rosa_chinensis	RchiOBHm_Chr3g0476941 RchiOBHm_Chr3g0476971 RchiOBHm_Chr5g0009761 RchiOBHm_Chr5g0034711
rosa_laevigata	RLG00000015202 RLG00000023743 RLG00000023744 RLG00000031693
rosa_multiflora	Rmu_sc0000288.1_g000023 Rmu_sc0000410.1_g000010
rosa_roxburghii	Rroxscaffold_1G00066450 Rroxscaffold_6G00404920
rosa_rugosa	Rorug03G0003900 Rorug03G0157800 Rorug03G0157900 Rorug04G0445500
rosa_samantha	Rh3AG207900 Rh3BG240400 Rh3BG240600 Rh3BG240800 Rh3BG240900 Rh3CG235200 Rh3CG235400 Rh3DG234000 Rh3DG234200 Rh5AG008500 Rh5AG008900 Rh5AG077200 Rh5CG090300 Rh5DG009400 Rh5DG072700
rosa_wichuraiana	Rw3G018960 Rw3G018970 Rw3G019000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	194, 302
Acc36I	ACCTGC	1 cut(s)	384
AccB1I	GGYRCC	1 cut(s)	131
AccI	GTMKAC	2 cut(s)	204, 791
AccII	CGCG	2 cut(s)	81, 346
AccIII	TCCGGA	2 cut(s)	436, 503
AciI	CCGC	4 cut(s)	79, 89, 271, 906
AclWI	GGATC	2 cut(s)	309, 322
AcoI	YGGCCR	3 cut(s)	150, 336, 573
AcuI	CTGAAG	1 cut(s)	49
AcyI	GRCGYC	2 cut(s)	132, 207
AfaI	GTAC	2 cut(s)	431, 538
AfiI	CCNNNNNNNGG	4 cut(s)	55, 66, 355, 856
AgsI	TTSAA	1 cut(s)	248
AjnI	CCWGG	4 cut(s)	34, 54, 365, 582
Alw21I	GWGCWC	1 cut(s)	630
Alw26I	GTCTC	2 cut(s)	719, 840
AlwI	GGATC	2 cut(s)	309, 322
Ama87I	CYCGRG	1 cut(s)	355
Aor13HI	TCCGGA	2 cut(s)	436, 503
AoxI	GGCC	7 cut(s)	31, 40, 57, 68, 150, 336, 573
ApaI	GGGCCC	1 cut(s)	35
ApeKI	GCWGC	5 cut(s)	83, 254, 257, 379, 703
ArsI	GACNNNNNNTTYG	2 cut(s)	108, 140
Asp700I	GAANNNNTTC	1 cut(s)	887
AspLEI	GCGC	5 cut(s)	83, 108, 134, 346, 348
AspS9I	GGNCC	6 cut(s)	31, 32, 69, 241, 859, 1030
AsuC2I	CCSGG	3 cut(s)	356, 357, 832
AsuHPI	GGTGA	5 cut(s)	298, 371, 572, 784, 920
AvaI	CYCGRG	1 cut(s)	355
AvaII	GGWCC	3 cut(s)	241, 859, 1030
BaeGI	GKGCMC	1 cut(s)	35
BalI	TGGCCA	1 cut(s)	152
BamHI	GGATCC	1 cut(s)	314
BanI	GGYRCC	1 cut(s)	131
BanII	GRGCYC	1 cut(s)	35
Bbv12I	GWGCWC	1 cut(s)	630
BbvI	GCAGC	5 cut(s)	95, 244, 266, 366, 715
BccI	CCATC	1 cut(s)	80
BceAI	ACGGC	3 cut(s)	287, 351, 910
BcgI	CGANNNNNNTGC	2 cut(s)	649, 683
BciT130I	CCWGG	4 cut(s)	36, 56, 367, 584
BcnI	CCSGG	3 cut(s)	356, 357, 832
BcoDI	GTCTC	2 cut(s)	719, 840
BfaI	CTAG	4 cut(s)	422, 555, 695, 827
BfmI	CTRYAG	1 cut(s)	380
BfoI	RGCGCY	2 cut(s)	109, 135
BfuAI	ACCTGC	1 cut(s)	384
BglI	GCCNNNNNGGC	1 cut(s)	39
BisI	GCNGC	6 cut(s)	79, 84, 255, 258, 380, 704
BlsI	GCNGC	6 cut(s)	80, 85, 256, 259, 381, 705
BmcAI	AGTACT	1 cut(s)	431
Bme1390I	CCNGG	7 cut(s)	36, 56, 356, 357, 367, 584, 832
Bme18I	GGWCC	3 cut(s)	241, 859, 1030
BmeT110I	CYCGRG	1 cut(s)	355
BmgT120I	GGNCC	6 cut(s)	31, 32, 69, 241, 859, 1030
BmiI	GGNNCC	4 cut(s)	33, 133, 316, 566
BmrFI	CCNGG	7 cut(s)	36, 56, 356, 357, 367, 584, 832
BmsI	GCATC	1 cut(s)	225
BpmI	CTGGAG	2 cut(s)	57, 752
Bpu10I	CCTNAGC	2 cut(s)	597, 1001
BpuEI	CTTGAG	1 cut(s)	940
BpuMI	CCSGG	3 cut(s)	356, 357, 832
BsaAI	YACGTR	2 cut(s)	227, 487
BsaHI	GRCGYC	2 cut(s)	132, 207
BsaI	GGTCTC	1 cut(s)	840
BsaJI	CCNNGG	4 cut(s)	34, 54, 291, 355
BsaWI	WCCGGW	3 cut(s)	436, 466, 503
BsaXI	ACNNNNNCTCC	4 cut(s)	104, 134, 666, 696
Bsc4I	CCNNNNNNNGG	4 cut(s)	55, 66, 355, 856
Bse118I	RCCGGY	3 cut(s)	134, 338, 679
Bse1I	ACTGG	1 cut(s)	735
BseAI	TCCGGA	2 cut(s)	436, 503
BseBI	CCWGG	4 cut(s)	36, 56, 367, 584
BseDI	CCNNGG	4 cut(s)	34, 54, 291, 355
BseGI	GGATG	2 cut(s)	478, 607
BseLI	CCNNNNNNNGG	4 cut(s)	55, 66, 355, 856
BseMII	CTCAG	3 cut(s)	611, 654, 828
BseNI	ACTGG	1 cut(s)	735
BsePI	GCGCGC	1 cut(s)	344
BseRI	GAGGAG	1 cut(s)	1001
BseSI	GKGCMC	1 cut(s)	35
BseX3I	CGGCCG	1 cut(s)	336
BseXI	GCAGC	5 cut(s)	95, 244, 266, 366, 715
BsgI	GTGCAG	2 cut(s)	626, 915
Bsh1236I	CGCG	2 cut(s)	81, 346
Bsh1285I	CGRYCG	1 cut(s)	339
BshFI	GGCC	7 cut(s)	33, 42, 59, 70, 152, 338, 575
BshNI	GGYRCC	1 cut(s)	131
BsiEI	CGRYCG	1 cut(s)	339
BsiHKAI	GWGCWC	1 cut(s)	630
BsiHKCI	CYCGRG	1 cut(s)	355
BsiSI	CCGG	8 cut(s)	135, 339, 356, 437, 467, 504, 680, 832
BslFI	GGGAC	2 cut(s)	647, 1019
BslI	CCNNNNNNNGG	4 cut(s)	55, 66, 355, 856
BsmAI	GTCTC	2 cut(s)	719, 840
BsmFI	GGGAC	2 cut(s)	647, 1019
BsnI	GGCC	7 cut(s)	33, 42, 59, 70, 152, 338, 575
Bso31I	GGTCTC	1 cut(s)	840
BsoBI	CYCGRG	1 cut(s)	355
Bsp120I	GGGCCC	1 cut(s)	31
Bsp1286I	GDGCHC	2 cut(s)	35, 630
Bsp13I	TCCGGA	2 cut(s)	436, 503
Bsp143I	GATC	2 cut(s)	314, 577
BspACI	CCGC	4 cut(s)	79, 89, 271, 906
BspANI	GGCC	7 cut(s)	33, 42, 59, 70, 152, 338, 575
BspCNI	CTCAG	3 cut(s)	610, 653, 827
BspEI	TCCGGA	2 cut(s)	436, 503
BspFNI	CGCG	2 cut(s)	81, 346
BspLI	GGNNCC	4 cut(s)	33, 133, 316, 566
BspMAI	CTGCAG	1 cut(s)	384
BspMI	ACCTGC	1 cut(s)	384
BspPI	GGATC	2 cut(s)	309, 322
BspT107I	GGYRCC	1 cut(s)	131
BspTNI	GGTCTC	1 cut(s)	840
BsrFI	RCCGGY	3 cut(s)	134, 338, 679
BsrI	ACTGG	1 cut(s)	735
BssAI	RCCGGY	3 cut(s)	134, 338, 679
BssECI	CCNNGG	4 cut(s)	34, 54, 291, 355
BssHII	GCGCGC	1 cut(s)	344
BssMI	GATC	2 cut(s)	314, 577
BssNAI	GTATAC	1 cut(s)	792
BssNI	GRCGYC	2 cut(s)	132, 207
Bst1107I	GTATAC	1 cut(s)	792
Bst2UI	CCWGG	4 cut(s)	36, 56, 367, 584
Bst4CI	ACNGT	2 cut(s)	310, 761
BstACI	GRCGYC	2 cut(s)	132, 207
BstBAI	YACGTR	2 cut(s)	227, 487
BstC8I	GCNNGC	6 cut(s)	136, 346, 609, 879, 926, 930
BstDEI	CTNAG	5 cut(s)	426, 597, 640, 814, 1001
BstDSI	CCRYGG	1 cut(s)	291
BstENI	CCTNNNNNAGG	2 cut(s)	53, 64
BstF5I	GGATG	2 cut(s)	478, 607
BstFNI	CGCG	2 cut(s)	81, 346
BstH2I	RGCGCY	2 cut(s)	109, 135
BstHHI	GCGC	5 cut(s)	83, 108, 134, 346, 348
BstKTI	GATC	2 cut(s)	317, 580
BstMAI	GTCTC	2 cut(s)	719, 840
BstMBI	GATC	2 cut(s)	314, 577
BstMCI	CGRYCG	1 cut(s)	339
BstMWI	GCNNNNNNNGC	6 cut(s)	39, 144, 376, 827, 903, 934
BstNI	CCWGG	4 cut(s)	36, 56, 367, 584
BstSCI	CCNGG	7 cut(s)	34, 54, 354, 355, 365, 582, 830
BstSFI	CTRYAG	1 cut(s)	380
BstSLI	GKGCMC	1 cut(s)	35
BstUI	CGCG	2 cut(s)	81, 346
BstV1I	GCAGC	5 cut(s)	95, 244, 266, 366, 715
BstX2I	RGATCY	1 cut(s)	314
BstXI	CCANNNNNNTGG	1 cut(s)	469
BstYI	RGATCY	1 cut(s)	314
BstZ17I	GTATAC	1 cut(s)	792
BstZI	CGGCCG	1 cut(s)	336
BsuRI	GGCC	7 cut(s)	33, 42, 59, 70, 152, 338, 575
BtgI	CCRYGG	1 cut(s)	291
BtsCI	GGATG	2 cut(s)	478, 607
BtsIMutI	CAGTG	4 cut(s)	648, 728, 822, 879
BveI	ACCTGC	1 cut(s)	384
Cac8I	GCNNGC	6 cut(s)	136, 346, 609, 879, 926, 930
CfoI	GCGC	5 cut(s)	83, 108, 134, 346, 348
Cfr10I	RCCGGY	3 cut(s)	134, 338, 679
Cfr13I	GGNCC	6 cut(s)	31, 32, 69, 241, 859, 1030
Cfr9I	CCCGGG	1 cut(s)	355
CseI	GACGC	2 cut(s)	215, 655
Csp6I	GTAC	2 cut(s)	430, 537
CviAII	CATG	3 cut(s)	148, 571, 798
CviQI	GTAC	2 cut(s)	430, 537
DdeI	CTNAG	5 cut(s)	426, 597, 640, 814, 1001
DinI	GGCGCC	1 cut(s)	133
DpnI	GATC	2 cut(s)	316, 579
DpnII	GATC	2 cut(s)	314, 577
DrdI	GACNNNNNNGTC	2 cut(s)	194, 302
DseDI	GACNNNNNNGTC	2 cut(s)	194, 302
EaeI	YGGCCR	3 cut(s)	150, 336, 573
EagI	CGGCCG	1 cut(s)	336
EclXI	CGGCCG	1 cut(s)	336
Eco147I	AGGCCT	2 cut(s)	42, 59
Eco24I	GRGCYC	1 cut(s)	35
Eco31I	GGTCTC	1 cut(s)	840
Eco47I	GGWCC	3 cut(s)	241, 859, 1030
Eco52I	CGGCCG	1 cut(s)	336
Eco57I	CTGAAG	1 cut(s)	49
Eco88I	CYCGRG	1 cut(s)	355
EcoNI	CCTNNNNNAGG	2 cut(s)	53, 64
EcoO109I	RGGNCCY	1 cut(s)	32
EcoRII	CCWGG	4 cut(s)	34, 54, 365, 582
EcoT38I	GRGCYC	1 cut(s)	35
EgeI	GGCGCC	1 cut(s)	133
EheI	GGCGCC	1 cut(s)	133
FaeI	CATG	3 cut(s)	151, 574, 801
FaqI	GGGAC	2 cut(s)	647, 1019
FatI	CATG	3 cut(s)	147, 570, 797
FauI	CCCGC	2 cut(s)	96, 278
FblI	GTMKAC	2 cut(s)	204, 791
Fnu4HI	GCNGC	6 cut(s)	79, 84, 255, 258, 380, 704
FokI	GGATG	2 cut(s)	485, 614
FriOI	GRGCYC	1 cut(s)	35
Fsp4HI	GCNGC	6 cut(s)	79, 84, 255, 258, 380, 704
FspBI	CTAG	4 cut(s)	422, 555, 695, 827
GlaI	GCGC	5 cut(s)	82, 107, 133, 345, 347
GluI	GCNGC	6 cut(s)	79, 84, 255, 258, 380, 704
GsuI	CTGGAG	2 cut(s)	57, 752
HaeII	RGCGCY	2 cut(s)	109, 135
HaeIII	GGCC	7 cut(s)	33, 42, 59, 70, 152, 338, 575
HapII	CCGG	8 cut(s)	135, 339, 356, 437, 467, 504, 680, 832
HgaI	GACGC	2 cut(s)	215, 655
HhaI	GCGC	5 cut(s)	83, 108, 134, 346, 348
Hin1I	GRCGYC	2 cut(s)	132, 207
Hin1II	CATG	3 cut(s)	151, 574, 801
Hin6I	GCGC	5 cut(s)	81, 106, 132, 344, 346
HinP1I	GCGC	5 cut(s)	81, 106, 132, 344, 346
HincII	GTYRAC	2 cut(s)	205, 592
HindII	GTYRAC	2 cut(s)	205, 592
HinfI	GANTC	5 cut(s)	362, 541, 548, 739, 1007
HpaI	GTTAAC	1 cut(s)	592
HpaII	CCGG	8 cut(s)	135, 339, 356, 437, 467, 504, 680, 832
HphI	GGTGA	5 cut(s)	298, 371, 572, 784, 920
Hpy166II	GTNNAC	5 cut(s)	205, 295, 592, 757, 792
Hpy188I	TCNGA	5 cut(s)	314, 319, 513, 845, 941
Hpy188III	TCNNGA	6 cut(s)	437, 478, 504, 545, 599, 919
Hpy8I	GTNNAC	5 cut(s)	205, 295, 592, 757, 792
Hpy99I	CGWCG	6 cut(s)	146, 191, 206, 209, 314, 671
HpyAV	CCTTC	6 cut(s)	70, 102, 254, 271, 850, 936
HpyCH4III	ACNGT	2 cut(s)	310, 761
HpyCH4IV	ACGT	5 cut(s)	141, 226, 390, 486, 588
HpyCH4V	TGCA	5 cut(s)	327, 382, 607, 932, 973
HpyF10VI	GCNNNNNNNGC	6 cut(s)	39, 144, 376, 827, 903, 934
HpyF3I	CTNAG	5 cut(s)	426, 597, 640, 814, 1001
HpySE526I	ACGT	5 cut(s)	141, 226, 390, 486, 588
Hsp92I	GRCGYC	2 cut(s)	132, 207
Hsp92II	CATG	3 cut(s)	151, 574, 801
HspAI	GCGC	5 cut(s)	81, 106, 132, 344, 346
KasI	GGCGCC	1 cut(s)	131
Kpn2I	TCCGGA	2 cut(s)	436, 503
KroI	GCCGGC	1 cut(s)	134
KroNI	GCCGGC	1 cut(s)	136
KspAI	GTTAAC	1 cut(s)	592
Kzo9I	GATC	2 cut(s)	314, 577
LmnI	GCTCC	2 cut(s)	625, 834
Lsp1109I	GCAGC	5 cut(s)	95, 244, 266, 366, 715
LweI	GCATC	1 cut(s)	225
MaeI	CTAG	4 cut(s)	422, 555, 695, 827
MaeII	ACGT	5 cut(s)	141, 226, 390, 486, 588
MaeIII	GTNAC	4 cut(s)	304, 331, 809, 961
MalI	GATC	2 cut(s)	316, 579
MboI	GATC	2 cut(s)	314, 577
MboII	GAAGA	2 cut(s)	55, 748
MfeI	CAATTG	1 cut(s)	804
MflI	RGATCY	1 cut(s)	314
MhlI	GDGCHC	2 cut(s)	35, 630
MlsI	TGGCCA	1 cut(s)	152
MluCI	AATT	1 cut(s)	804
MluNI	TGGCCA	1 cut(s)	152
Mly113I	GGCGCC	1 cut(s)	132
MlyI	GAGTC	3 cut(s)	371, 542, 1001
MmeI	TCCRAC	3 cut(s)	292, 342, 886
Mox20I	TGGCCA	1 cut(s)	152
MroI	TCCGGA	2 cut(s)	436, 503
MroNI	GCCGGC	1 cut(s)	134
MroXI	GAANNNNTTC	1 cut(s)	887
MscI	TGGCCA	1 cut(s)	152
MseI	TTAA	3 cut(s)	170, 591, 1043
Msp20I	TGGCCA	1 cut(s)	152
MspA1I	CMGCKG	1 cut(s)	257
MspI	CCGG	8 cut(s)	135, 339, 356, 437, 467, 504, 680, 832
MspR9I	CCNGG	7 cut(s)	36, 56, 356, 357, 367, 584, 832
MunI	CAATTG	1 cut(s)	804
MvaI	CCWGG	4 cut(s)	36, 56, 367, 584
MvnI	CGCG	2 cut(s)	81, 346
MwoI	GCNNNNNNNGC	6 cut(s)	39, 144, 376, 827, 903, 934
NaeI	GCCGGC	1 cut(s)	136
NarI	GGCGCC	1 cut(s)	132
NciI	CCSGG	3 cut(s)	356, 357, 832
NdeII	GATC	2 cut(s)	314, 577
NgoMIV	GCCGGC	1 cut(s)	134
NlaIII	CATG	3 cut(s)	151, 574, 801
NlaIV	GGNNCC	4 cut(s)	33, 133, 316, 566
NmeAIII	GCCGAG	1 cut(s)	989
NmuCI	GTSAC	3 cut(s)	304, 331, 961
PauI	GCGCGC	1 cut(s)	344
PceI	AGGCCT	2 cut(s)	42, 59
PcsI	WCGNNNNNNNCGW	1 cut(s)	306
PdiI	GCCGGC	1 cut(s)	136
PdmI	GAANNNNTTC	1 cut(s)	887
PfeI	GAWTC	2 cut(s)	541, 739
PkrI	GCNGC	6 cut(s)	80, 85, 256, 259, 381, 705
PleI	GAGTC	3 cut(s)	370, 542, 1001
PluTI	GGCGCC	1 cut(s)	135
PpsI	GAGTC	3 cut(s)	370, 542, 1001
Ppu21I	YACGTR	2 cut(s)	227, 487
Psp6I	CCWGG	4 cut(s)	34, 54, 365, 582
PspGI	CCWGG	4 cut(s)	34, 54, 365, 582
PspN4I	GGNNCC	4 cut(s)	33, 133, 316, 566
PspOMI	GGGCCC	1 cut(s)	31
PspPI	GGNCC	6 cut(s)	31, 32, 69, 241, 859, 1030
PstI	CTGCAG	1 cut(s)	384
PsuI	RGATCY	1 cut(s)	314
PteI	GCGCGC	1 cut(s)	344
PvuII	CAGCTG	1 cut(s)	257
RsaI	GTAC	2 cut(s)	431, 538
RsaNI	GTAC	2 cut(s)	430, 537
SalI	GTCGAC	1 cut(s)	203
SaqAI	TTAA	3 cut(s)	170, 591, 1043
SatI	GCNGC	6 cut(s)	79, 84, 255, 258, 380, 704
Sau3AI	GATC	2 cut(s)	314, 577
Sau96I	GGNCC	6 cut(s)	31, 32, 69, 241, 859, 1030
ScaI	AGTACT	1 cut(s)	431
SchI	GAGTC	3 cut(s)	371, 542, 1001
ScrFI	CCNGG	7 cut(s)	36, 56, 356, 357, 367, 584, 832
SduI	GDGCHC	2 cut(s)	35, 630
SfaNI	GCATC	1 cut(s)	225
SfcI	CTRYAG	1 cut(s)	380
SfiI	GGCCNNNNNGGCC	1 cut(s)	39
SfoI	GGCGCC	1 cut(s)	133
SgrDI	CGTCGACG	1 cut(s)	203
SinI	GGWCC	3 cut(s)	241, 859, 1030
SmaI	CCCGGG	1 cut(s)	357
SmlI	CTYRAG	1 cut(s)	919
SmoI	CTYRAG	1 cut(s)	919
Sse9I	AATT	1 cut(s)	804
SseBI	AGGCCT	2 cut(s)	42, 59
SsiI	CCGC	4 cut(s)	79, 89, 271, 906
SspDI	GGCGCC	1 cut(s)	131
SspMI	CTAG	4 cut(s)	422, 555, 695, 827
StuI	AGGCCT	2 cut(s)	42, 59
StyD4I	CCNGG	7 cut(s)	34, 54, 354, 355, 365, 582, 830
TaaI	ACNGT	2 cut(s)	310, 761
TaiI	ACGT	5 cut(s)	144, 229, 393, 489, 591
TaqI	TCGA	2 cut(s)	204, 546
TasI	AATT	1 cut(s)	804
TatI	WGTACW	1 cut(s)	429
TauI	GCSGC	1 cut(s)	81
TfiI	GAWTC	2 cut(s)	541, 739
Tru1I	TTAA	3 cut(s)	170, 591, 1043
Tru9I	TTAA	3 cut(s)	170, 591, 1043
TscAI	CASTG	4 cut(s)	648, 735, 822, 879
TseFI	GTSAC	3 cut(s)	304, 331, 961
TseI	GCWGC	5 cut(s)	83, 254, 257, 379, 703
Tsp45I	GTSAC	3 cut(s)	304, 331, 961
TspDTI	ATGAA	2 cut(s)	17, 786
TspGWI	ACGGA	2 cut(s)	112, 280
TspMI	CCCGGG	1 cut(s)	355
TspRI	CASTG	4 cut(s)	648, 735, 822, 879
VpaK11BI	GGWCC	3 cut(s)	241, 859, 1030
XagI	CCTNNNNNAGG	2 cut(s)	53, 64
XmaI	CCCGGG	1 cut(s)	355
XmiI	GTMKAC	2 cut(s)	204, 791
XmnI	GAANNNNTTC	1 cut(s)	887
XspI	CTAG	4 cut(s)	422, 555, 695, 827
ZrmI	AGTACT	1 cut(s)	431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.